CuGenDBv2

Gene ID	Lsi11G003270
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	methyl-CpG-binding domain-containing protein 11-like
Genome location	chr11:3398674..3401111
RNA-Seq Expression	Lsi11G003270
Synteny	Lsi11G003270
Gene Ontology terms	GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function)
InterPro domains	IPR016177 - DNA-binding domain superfamily IPR039622 - Methyl-CpG-binding domain-containing protein 10/11

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004139304.1 methyl-CpG-binding domain-containing protein 11 [Cucumis sativus]

2.2e-116

90.19

Show/hide

Query:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAEVK
        GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKE EAEPE++EEKKEVDN DAGKDES+ DAEVK
Subjt:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAEVK

Query:  D-DKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPD
        D DKKENQDEKETK+EAA+AEPP+PDDQLNA N+AEKQEHKITNES+QEK E NLNEKEPESSKLNLNEN+EGAKHEE IE+PQV EKNDGNF EAVKPD
Subjt:  D-DKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPD

Query:  TLVSDKQEKVLENQNPNQQDIELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP
        TLVSDKQE  LENQNPNQQDIELE EIKDKAG  EEKSEKHTETNKTIEVTENGNHR+GTGEVKP
Subjt:  TLVSDKQEKVLENQNPNQQDIELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP

XP_008457463.1 PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Cucumis melo]

1.1e-118

91.7

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Query:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAEVK
        GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAK SPPMESEHPKRKRTSVSKKDLKE EAEPE+LEEKKEVDN DAGKDES+ DAEVK
Subjt:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAEVK

Query:  D-DKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPD
        D +KKEN DEKETK+EAA+AEPP+PDDQLNADN+AEKQEHKITNES+QEKLE NLNEKEPESSKLNLNENLEGAKHEEKIEQPQV EKNDGNF EAVKPD
Subjt:  D-DKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPD

Query:  TLVSDKQEKVLENQNPNQQDIELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP
        TLVSDKQE  LENQNPNQQ+IELEGEIKDKAGA EEKSEKHTETNKTIEVTENGNHR+GTGEVKP
Subjt:  TLVSDKQEKVLENQNPNQQDIELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP

XP_022946072.1 methyl-CpG-binding domain-containing protein 11-like [Cucurbita moschata]

1.1e-104

75.84

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Query:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEP-EILEEKKEVDNQDAGKDESIPDAEV
        GEE +NKRKLDQYLK+HPGGPA+AEFDWGTGETPRRSARISEKAKV  PMESEHPKRKRTSVSKK LKE E EP E+ EEKKEVDNQDAGKDE+I DAEV
Subjt:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEP-EILEEKKEVDNQDAGKDESIPDAEV

Query:  KD---------------------------------DKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNL
        KD                                 DKKENQDEKETKDEAA+AEPP+PDDQLNADNDAEKQEHKIT+ES+QEKLERNLNEKEPESSKLNL
Subjt:  KD---------------------------------DKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNL

Query:  NENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPDTLVSDKQEKVLENQNPNQQDIELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP
        NENLEGAKH+EKIEQPQVEEKND    E VKPDTL+SD+QEK  ENQ P +QDIELEGEIKDKA ATEEK+EKHTETNK+IE TENG+HR+  GEVKP
Subjt:  NENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPDTLVSDKQEKVLENQNPNQQDIELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP

XP_023545855.1 methyl-CpG-binding domain-containing protein 11-like [Cucurbita pepo subsp. pepo]

4.6e-106

76.51

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Query:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEP-EILEEKKEVDNQDAGKDESIPDAEV
        GEE +NKRKLDQYLK+HPGGPA+AEFDWGTGETPRRSARISEKAKV  PMESEHPKRKRTSVSKK LKE E EP E+LEEKKEVDNQDAGKDESI DAEV
Subjt:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEP-EILEEKKEVDNQDAGKDESIPDAEV

Query:  KD---------------------------------DKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNL
        KD                                 DKKENQDEKETKDEAA+AEPP+PDDQLNADNDAEKQEHKIT+ES+QEKLERNLNEKEPESSKLNL
Subjt:  KD---------------------------------DKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNL

Query:  NENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPDTLVSDKQEKVLENQNPNQQDIELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP
        NENLEGAKH+E+IEQPQVEEKND N  E VKPDTL+SD+QEK  ENQ P +QDIELEGEIKDKA ATEEK+EKHTETNK+IE TENG+HR+  GEVKP
Subjt:  NENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPDTLVSDKQEKVLENQNPNQQDIELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP

XP_038889539.1 methyl-CpG-binding domain-containing protein 11-like [Benincasa hispida]

1.1e-115

91.29

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Query:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAEVK
        GEEI NKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAK SPPMESEHPKRKRTSVSKKDLKE EAEPE+LEEKKE DNQDAGKD S  D EVK
Subjt:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAEVK

Query:  DDKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPDT
        D KKENQDEKETKDEAA+AEPP+P DQLNADNDAEK E+KITNESDQEKLE NLNEKEPESSKLNLNENLEGAKHEEKIEQPQVEE NDGNF EAVKPDT
Subjt:  DDKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPDT

Query:  LVSDKQEKVLENQNPNQQDIELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP
        LVSDKQEK LENQNPNQQDIELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHR+G  EV P
Subjt:  LVSDKQEKVLENQNPNQQDIELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LG01 MBD domain-containing protein

1.1e-116

90.19

Show/hide

Query:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAEVK
        GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKE EAEPE++EEKKEVDN DAGKDES+ DAEVK
Subjt:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAEVK

Query:  D-DKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPD
        D DKKENQDEKETK+EAA+AEPP+PDDQLNA N+AEKQEHKITNES+QEK E NLNEKEPESSKLNLNEN+EGAKHEE IE+PQV EKNDGNF EAVKPD
Subjt:  D-DKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPD

Query:  TLVSDKQEKVLENQNPNQQDIELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP
        TLVSDKQE  LENQNPNQQDIELE EIKDKAG  EEKSEKHTETNKTIEVTENGNHR+GTGEVKP
Subjt:  TLVSDKQEKVLENQNPNQQDIELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP

A0A1S3C687 methyl-CpG-binding domain-containing protein 11-like

5.2e-119

91.7

Show/hide

Query:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAEVK
        GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAK SPPMESEHPKRKRTSVSKKDLKE EAEPE+LEEKKEVDN DAGKDES+ DAEVK
Subjt:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAEVK

Query:  D-DKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPD
        D +KKEN DEKETK+EAA+AEPP+PDDQLNADN+AEKQEHKITNES+QEKLE NLNEKEPESSKLNLNENLEGAKHEEKIEQPQV EKNDGNF EAVKPD
Subjt:  D-DKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPD

Query:  TLVSDKQEKVLENQNPNQQDIELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP
        TLVSDKQE  LENQNPNQQ+IELEGEIKDKAGA EEKSEKHTETNKTIEVTENGNHR+GTGEVKP
Subjt:  TLVSDKQEKVLENQNPNQQDIELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP

A0A5D3BH67 Methyl-CpG-binding domain-containing protein 11-like

5.2e-119

91.7

Show/hide

Query:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAEVK
        GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAK SPPMESEHPKRKRTSVSKKDLKE EAEPE+LEEKKEVDN DAGKDES+ DAEVK
Subjt:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAEVK

Query:  D-DKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPD
        D +KKEN DEKETK+EAA+AEPP+PDDQLNADN+AEKQEHKITNES+QEKLE NLNEKEPESSKLNLNENLEGAKHEEKIEQPQV EKNDGNF EAVKPD
Subjt:  D-DKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPD

Query:  TLVSDKQEKVLENQNPNQQDIELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP
        TLVSDKQE  LENQNPNQQ+IELEGEIKDKAGA EEKSEKHTETNKTIEVTENGNHR+GTGEVKP
Subjt:  TLVSDKQEKVLENQNPNQQDIELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP

A0A6J1G2N9 methyl-CpG-binding domain-containing protein 11-like

5.5e-105

75.84

Show/hide

Query:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEP-EILEEKKEVDNQDAGKDESIPDAEV
        GEE +NKRKLDQYLK+HPGGPA+AEFDWGTGETPRRSARISEKAKV  PMESEHPKRKRTSVSKK LKE E EP E+ EEKKEVDNQDAGKDE+I DAEV
Subjt:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEP-EILEEKKEVDNQDAGKDESIPDAEV

Query:  KD---------------------------------DKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNL
        KD                                 DKKENQDEKETKDEAA+AEPP+PDDQLNADNDAEKQEHKIT+ES+QEKLERNLNEKEPESSKLNL
Subjt:  KD---------------------------------DKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNL

Query:  NENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPDTLVSDKQEKVLENQNPNQQDIELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP
        NENLEGAKH+EKIEQPQVEEKND    E VKPDTL+SD+QEK  ENQ P +QDIELEGEIKDKA ATEEK+EKHTETNK+IE TENG+HR+  GEVKP
Subjt:  NENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPDTLVSDKQEKVLENQNPNQQDIELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP

A0A6J1KA38 methyl-CpG-binding domain-containing protein 11-like

6.1e-104

75.5

Show/hide

Query:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEP-EILEEKKEVDNQDAGKDESIPDAEV
        GEE +NKRKLDQYLK+HPG PA+AEFDWGTGETPRRSARISEKAKV  PMESEHPKRKRTSVSKK LKE E EP E+LEEKKEVDNQDAGK ESI DAEV
Subjt:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEP-EILEEKKEVDNQDAGKDESIPDAEV

Query:  KD---------------------------------DKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNL
        KD                                 DKKENQD+KETKDEAA+AEPP+PDDQLNADNDAEKQEHKIT+ES+QEKLERNLNEKEPESSKLNL
Subjt:  KD---------------------------------DKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNL

Query:  NENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPDTLVSDKQEKVLENQNPNQQDIELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP
        NENLEGAKH+EKIEQPQVEEKND N  E VKPDTL+SD+QEK  ENQ P +QDIELEGEI DKA ATEEK+EKHTETNK+IE TENG+HR+  GEVKP
Subjt:  NENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPDTLVSDKQEKVLENQNPNQQDIELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP

SwissProt top hits

e value

%identity

Alignment

Q9LW00 Methyl-CpG-binding domain-containing protein 11

1.8e-12

36.36

Show/hide

Query:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPK---RKRTSVSKKD---------------LKEAEAEPE--ILEEK
        GEEI+N+++L+QYLK+HPG PA AEFDW T  TPRRSARISEK K +P  + E PK   R ++ VSKKD               +K+ E  P   I E +
Subjt:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPK---RKRTSVSKKD---------------LKEAEAEPE--ILEEK

Query:  KEVDNQDAGKDESIPDAEVKDDKKENQDEKETKDEAAKAE--PPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEK
           D   +G+ E + DA      KEN   +ET + A   E      +  L++ +D  K+  K  +    EK   ++ +K  E+S    N   E   HEE 
Subjt:  KEVDNQDAGKDESIPDAEVKDDKKENQDEKETKDEAAKAE--PPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEK

Query:  IEQPQVEEK
            + E K
Subjt:  IEQPQVEEK

Q9XI36 Methyl-CpG-binding domain-containing protein 10

1.9e-14

35.27

Show/hide

Query:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHP--KRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAE
        GEEI+++++L+QYLKAHPG P  +EF+W TGETPRRS+RIS+K K + P   + P  K++R+S++KKD KEA    E  EE    +N D  KD    +AE
Subjt:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHP--KRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAE

Query:  VKDDKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVE----EKNDGNFVE
         + +K     EKE   E A+AE    + +        K+  K T    + + E    EKE E  K    EN E     +K E  +V+    EK  G+   
Subjt:  VKDDKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVE----EKNDGNFVE

Query:  AVKPDTLVSDKQEKVLENQNPNQQDIELEGEIKDKAG--ATEEKSEKHTETNKTIEVT
        A +P      K E + + +    Q++  E +++ K     TE K    TE N    VT
Subjt:  AVKPDTLVSDKQEKVLENQNPNQQDIELEGEIKDKAG--ATEEKSEKHTETNKTIEVT

Arabidopsis top hits

e value

%identity

Alignment

AT1G15340.1 methyl-CPG-binding domain 10

1.4e-15

35.27

Show/hide

Query:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHP--KRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAE
        GEEI+++++L+QYLKAHPG P  +EF+W TGETPRRS+RIS+K K + P   + P  K++R+S++KKD KEA    E  EE    +N D  KD    +AE
Subjt:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHP--KRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDAE

Query:  VKDDKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVE----EKNDGNFVE
         + +K     EKE   E A+AE    + +        K+  K T    + + E    EKE E  K    EN E     +K E  +V+    EK  G+   
Subjt:  VKDDKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVE----EKNDGNFVE

Query:  AVKPDTLVSDKQEKVLENQNPNQQDIELEGEIKDKAG--ATEEKSEKHTETNKTIEVT
        A +P      K E + + +    Q++  E +++ K     TE K    TE N    VT
Subjt:  AVKPDTLVSDKQEKVLENQNPNQQDIELEGEIKDKAG--ATEEKSEKHTETNKTIEVT

AT3G15790.1 methyl-CPG-binding domain 11

1.3e-13

36.36

Show/hide

Query:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPK---RKRTSVSKKD---------------LKEAEAEPE--ILEEK
        GEEI+N+++L+QYLK+HPG PA AEFDW T  TPRRSARISEK K +P  + E PK   R ++ VSKKD               +K+ E  P   I E +
Subjt:  GEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPK---RKRTSVSKKD---------------LKEAEAEPE--ILEEK

Query:  KEVDNQDAGKDESIPDAEVKDDKKENQDEKETKDEAAKAE--PPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEK
           D   +G+ E + DA      KEN   +ET + A   E      +  L++ +D  K+  K  +    EK   ++ +K  E+S    N   E   HEE 
Subjt:  KEVDNQDAGKDESIPDAEVKDDKKENQDEKETKDEAAKAE--PPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEK

Query:  IEQPQVEEK
            + E K
Subjt:  IEQPQVEEK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAACTGATGGTCTGGATCAAAGACTTCTGTGCATAGGGGAGGAGATCAACAACAAAAGAAAGTTGGATCAGTACCTGAAGGCACACCCTGGTGGCCCAGCAGCTGC
CGAATTTGATTGGGGCACGGGTGAGACGCCGAGGAGGTCAGCAAGGATAAGTGAAAAGGCTAAAGTGTCTCCACCAATGGAGAGTGAGCACCCAAAGAGAAAAAGAACTT
CGGTGTCCAAGAAAGATCTTAAAGAAGCAGAAGCTGAACCAGAAATTCTGGAGGAGAAGAAAGAAGTTGACAATCAAGATGCTGGAAAAGATGAGAGCATACCTGATGCT
GAGGTAAAAGATGACAAGAAGGAGAATCAAGATGAGAAGGAAACGAAAGACGAAGCTGCCAAAGCAGAGCCACCAAGGCCTGATGATCAGTTGAATGCAGATAATGATGC
TGAAAAACAAGAACATAAGATAACCAATGAATCAGATCAAGAAAAATTGGAAAGAAACCTCAATGAGAAGGAGCCTGAAAGCTCTAAATTAAACCTCAATGAGAATCTGG
AAGGAGCAAAGCATGAAGAAAAGATTGAGCAACCACAAGTTGAGGAGAAGAATGATGGTAATTTCGTTGAAGCTGTCAAACCTGACACTCTTGTATCTGATAAACAAGAA
AAGGTACTAGAGAATCAAAACCCTAATCAACAGGATATTGAACTAGAAGGAGAAATCAAGGACAAAGCAGGTGCAACTGAAGAGAAGAGTGAGAAACATACTGAGACAAA
CAAGACTATAGAAGTCACTGAGAATGGCAACCACAGGAGTGGTACTGGTGAGGTAAAGCCTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

METDGLDQRLLCIGEEINNKRKLDQYLKAHPGGPAAAEFDWGTGETPRRSARISEKAKVSPPMESEHPKRKRTSVSKKDLKEAEAEPEILEEKKEVDNQDAGKDESIPDA
EVKDDKKENQDEKETKDEAAKAEPPRPDDQLNADNDAEKQEHKITNESDQEKLERNLNEKEPESSKLNLNENLEGAKHEEKIEQPQVEEKNDGNFVEAVKPDTLVSDKQE
KVLENQNPNQQDIELEGEIKDKAGATEEKSEKHTETNKTIEVTENGNHRSGTGEVKP

Lsi11G003270 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome