; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G003470 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G003470
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSmall nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
Genome locationchr11:3653245..3657365
RNA-Seq ExpressionLsi11G003470
SyntenyLsi11G003470
Gene Ontology termsNA
InterPro domainsIPR019188 - Small nuclear RNA activating complex (SNAPc), subunit SNAP43


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063525.1 putative mediator of RNA polymerase II transcription subunit 26 isoform X1 [Cucumis melo var. makuwa]9.2e-14391.55Show/hide
Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSF DMKKVWIGRKFTYIFEAAPS+NLAFFMQSI+AQSISHM S ASL HRLGGL+CLYCLYETQPF+PPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        ELKKLKELVVDAKEN+VKVVS VVK+MLEKNMFLFGSVDMNESAALETVNQLTELQNAR+QVAYNKLF+DTPIENYIHMD+GMEVGSN+L KMSTDYSEA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV
        KKLALYEAS+IVDVQDIKHIAEDE+LIGDTVEKIAEDWNVQRGVFYEQTGLDQQL+PVEA+QQLLED+ + NFDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV

KAE8651536.1 hypothetical protein Csa_019424 [Cucumis sativus]6.8e-14692.07Show/hide
Query:  EKVVDAMDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYK
        +K VDAMDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPS+NLAFFMQSI+AQSISHMLSTASL HRLGGL+CLYCLYETQPF+PPYK
Subjt:  EKVVDAMDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYK

Query:  IYLSIGELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMS
        IYLSIGELKKLKELVVDAKEN+VKVVS VVK+MLEKNMFLFGSVDMNESAALETVNQLTELQNAR+QVAY KLF+DTPI NYIHMD+GMEVGSNIL KMS
Subjt:  IYLSIGELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMS

Query:  TDYSEAKKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV
        TDYSEAKKLALYEAS+IVDVQDIKHIAEDE+LIGDTVEKIAEDWNVQRGVFYEQTGLDQQ VPVEA+QQLLED+A+ NFDKELERMLTDV
Subjt:  TDYSEAKKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV

XP_008457139.1 PREDICTED: uncharacterized protein LOC103496883 isoform X1 [Cucumis melo]4.6e-14290.85Show/hide
Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSF DMKKVWIGRKFTYIFEAAPS+NLAFFMQSI+AQSISHM S ASL HRLGGL+CLYCLYETQPF+PPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        ELKKLKELV+DAKEN+VKVVS VVK+MLEKNMFLFGSVDMNESAALETVNQLTELQNAR+QVAYNKLF+DTPIENYIHMD+GMEVGSN+L KMSTDYSEA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV
        KKLALYEAS+IVDVQDIKHIAEDE+LIGDTVEKIAEDWNVQRGVFYEQTGLDQQL+PVEA+QQLLED+ + +FDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV

XP_031737111.1 uncharacterized protein LOC101216308 isoform X1 [Cucumis sativus]1.9e-14392.61Show/hide
Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPS+NLAFFMQSI+AQSISHMLSTASL HRLGGL+CLYCLYETQPF+PPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        ELKKLKELVVDAKEN+VKVVS VVK+MLEKNMFLFGSVDMNESAALETVNQLTELQNAR+QVAY KLF+DTPI NYIHMD+GMEVGSNIL KMSTDYSEA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV
        KKLALYEAS+IVDVQDIKHIAEDE+LIGDTVEKIAEDWNVQRGVFYEQTGLDQQ VPVEA+QQLLED+A+ NFDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV

XP_038890120.1 uncharacterized protein LOC120079795 isoform X1 [Benincasa hispida]2.1e-14291.9Show/hide
Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        MDL+PFRLDIDELINEFAE GFTSFVDMKKVW+GRKFTYIFEAAPS+NLAFFMQSIYAQSISHMLSTASLSHRLGGL+CLYCLYETQPFKP YKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        ELKKLKELVVDAKEN+VKV SSVVK+MLEKNMFLFGSVDM ESAALETVNQLTELQNARIQVAYNKLF+DTPIENYIHMD+GMEVGSN+LKKMSTDYSEA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV
        KKLALYEASEIVDV DIKHIAEDE+LIGDTVEKIAEDWN+QRG F+EQTGLDQQLVPVEAEQ LLE +A+ENFD+ELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV

TrEMBL top hitse value%identityAlignment
A0A0A0LL25 Uncharacterized protein9.0e-14492.61Show/hide
Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPS+NLAFFMQSI+AQSISHMLSTASL HRLGGL+CLYCLYETQPF+PPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        ELKKLKELVVDAKEN+VKVVS VVK+MLEKNMFLFGSVDMNESAALETVNQLTELQNAR+QVAY KLF+DTPI NYIHMD+GMEVGSNIL KMSTDYSEA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV
        KKLALYEAS+IVDVQDIKHIAEDE+LIGDTVEKIAEDWNVQRGVFYEQTGLDQQ VPVEA+QQLLED+A+ NFDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV

A0A1S3C4E1 uncharacterized protein LOC103496883 isoform X12.2e-14290.85Show/hide
Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSF DMKKVWIGRKFTYIFEAAPS+NLAFFMQSI+AQSISHM S ASL HRLGGL+CLYCLYETQPF+PPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        ELKKLKELV+DAKEN+VKVVS VVK+MLEKNMFLFGSVDMNESAALETVNQLTELQNAR+QVAYNKLF+DTPIENYIHMD+GMEVGSN+L KMSTDYSEA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV
        KKLALYEAS+IVDVQDIKHIAEDE+LIGDTVEKIAEDWNVQRGVFYEQTGLDQQL+PVEA+QQLLED+ + +FDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV

A0A1S3C4X9 uncharacterized protein LOC103496883 isoform X21.6e-14090.49Show/hide
Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSF DMKKVWIGRKFTYIFEAAPS+NLAFFMQSI+AQSISHM S ASL HRLGGL+CLYCLYETQPF+PPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        ELKKLKELV+DAKEN+VKVVS VVK+MLEKNMFLFGSVDMNESAALETVNQLTELQNAR+QVAYNKLF+DTPIENYIHMD+GMEVGSN+L KMSTDYSEA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV
        KKLALY AS+IVDVQDIKHIAEDE+LIGDTVEKIAEDWNVQRGVFYEQTGLDQQL+PVEA+QQLLED+ + +FDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV

A0A5A7VCA1 Putative mediator of RNA polymerase II transcription subunit 26 isoform X14.5e-14391.55Show/hide
Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        MDLSPFRLDIDELINEFAECGFTSF DMKKVWIGRKFTYIFEAAPS+NLAFFMQSI+AQSISHM S ASL HRLGGL+CLYCLYETQPF+PPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        ELKKLKELVVDAKEN+VKVVS VVK+MLEKNMFLFGSVDMNESAALETVNQLTELQNAR+QVAYNKLF+DTPIENYIHMD+GMEVGSN+L KMSTDYSEA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV
        KKLALYEAS+IVDVQDIKHIAEDE+LIGDTVEKIAEDWNVQRGVFYEQTGLDQQL+PVEA+QQLLED+ + NFDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV

A0A6J1CN36 uncharacterized protein LOC1110130038.8e-13184.97Show/hide
Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        M+LSPFRLDIDELI E+AE G+TSF DMK VW GRKFTYIFEAAP SNLAFFMQS+YAQSI HM+ TASLS RLGG +CLYCLYETQPFKPPYKIYLSIG
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        ELKKLKELVVDAKE +VKV S+V K+MLEKNMFLFGSVDMNES+ALETVNQLTELQNARIQVAYNKLF DTPIE+YIHMD+GMEVG N+LKKMSTDYSEA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEA--EQQLLEDYANENFDKELERMLTDV
        KKLALYEAS+I+DVQDIKHI+ED+RLIGDTVE+IAE+WNVQRGVFYEQTGLD+QLVPVEA  E QLL  +A+ENFDKELERMLTD+
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEA--EQQLLEDYANENFDKELERMLTDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G53270.1 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein1.7e-8153.12Show/hide
Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P+SNLAFFMQS+Y  +I HM+S  S S RLGGL+CLYCL+E QPFKP ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        EL K ++LVV+AK+  V++ ++V K+ML++NM +FG+VD  E++A +T++QLTELQNAR++ AY KL  DT I  +IH+DMG EV  N L KMS +Y+EA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLVPVEAEQQLLEDYANENFDKELERMLT
        KK A+  A EI+++ DIKHI+E++ L+G+ +EK+ E+W+ QR  FYEQT LD      +QL  VE ++       ++ FD EL+R+L+
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLVPVEAEQQLLEDYANENFDKELERMLT

AT3G53270.2 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein1.7e-8153.12Show/hide
Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P+SNLAFFMQS+Y  +I HM+S  S S RLGGL+CLYCL+E QPFKP ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        EL K ++LVV+AK+  V++ ++V K+ML++NM +FG+VD  E++A +T++QLTELQNAR++ AY KL  DT I  +IH+DMG EV  N L KMS +Y+EA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLVPVEAEQQLLEDYANENFDKELERMLT
        KK A+  A EI+++ DIKHI+E++ L+G+ +EK+ E+W+ QR  FYEQT LD      +QL  VE ++       ++ FD EL+R+L+
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLVPVEAEQQLLEDYANENFDKELERMLT

AT3G53270.3 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein1.7e-8153.12Show/hide
Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P+SNLAFFMQS+Y  +I HM+S  S S RLGGL+CLYCL+E QPFKP ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        EL K ++LVV+AK+  V++ ++V K+ML++NM +FG+VD  E++A +T++QLTELQNAR++ AY KL  DT I  +IH+DMG EV  N L KMS +Y+EA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLVPVEAEQQLLEDYANENFDKELERMLT
        KK A+  A EI+++ DIKHI+E++ L+G+ +EK+ E+W+ QR  FYEQT LD      +QL  VE ++       ++ FD EL+R+L+
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLVPVEAEQQLLEDYANENFDKELERMLT

AT3G53270.4 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein1.7e-8153.12Show/hide
Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P+SNLAFFMQS+Y  +I HM+S  S S RLGGL+CLYCL+E QPFKP ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        EL K ++LVV+AK+  V++ ++V K+ML++NM +FG+VD  E++A +T++QLTELQNAR++ AY KL  DT I  +IH+DMG EV  N L KMS +Y+EA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLVPVEAEQQLLEDYANENFDKELERMLT
        KK A+  A EI+++ DIKHI+E++ L+G+ +EK+ E+W+ QR  FYEQT LD      +QL  VE ++       ++ FD EL+R+L+
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLVPVEAEQQLLEDYANENFDKELERMLT

AT3G53270.5 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein1.7e-8153.12Show/hide
Query:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG
        M+LSPF+ DIDELI+EF E   T+F DMK VW+ RKF++I+EA+P+SNLAFFMQS+Y  +I HM+S  S S RLGGL+CLYCL+E QPFKP ++IY+S+ 
Subjt:  MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLFCLYCLYETQPFKPPYKIYLSIG

Query:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA
        EL K ++LVV+AK+  V++ ++V K+ML++NM +FG+VD  E++A +T++QLTELQNAR++ AY KL  DT I  +IH+DMG EV  N L KMS +Y+EA
Subjt:  ELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSNILKKMSTDYSEA

Query:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLVPVEAEQQLLEDYANENFDKELERMLT
        KK A+  A EI+++ DIKHI+E++ L+G+ +EK+ E+W+ QR  FYEQT LD      +QL  VE ++       ++ FD EL+R+L+
Subjt:  KKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLD------QQLVPVEAEQQLLEDYANENFDKELERMLT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAACTGGGCTGGTTCAAGAAATCCCCCAACCCAACCCAACAGCCCATGGAAGGATTTTCCTTTACTATGCATTGAGAAAGTTGTGGATGCAATGGATCTCTCTCC
ATTCAGGCTTGATATTGATGAGCTGATCAATGAATTTGCTGAGTGTGGATTTACATCTTTTGTTGATATGAAGAAAGTATGGATTGGAAGAAAATTCACTTACATATTTG
AGGCTGCTCCTTCTTCCAACTTGGCGTTCTTTATGCAATCAATCTATGCCCAATCAATTAGTCATATGCTCAGTACTGCTTCTTTGTCACACAGACTGGGTGGCCTTTTT
TGCCTCTACTGTCTTTATGAGACACAACCCTTTAAGCCTCCTTACAAAATCTACCTGTCTATTGGAGAGTTGAAGAAACTGAAGGAACTTGTTGTTGATGCAAAAGAAAA
TGATGTAAAAGTGGTATCTTCTGTGGTGAAACAAATGTTAGAAAAGAACATGTTCCTCTTTGGTTCTGTAGACATGAATGAGAGCGCTGCTTTGGAAACAGTGAATCAAC
TAACGGAATTGCAAAATGCCCGCATTCAAGTAGCCTATAATAAGTTGTTTGATGATACCCCGATAGAAAACTATATCCATATGGACATGGGGATGGAAGTTGGTTCGAAT
ATATTAAAAAAGATGTCAACAGATTATTCAGAGGCCAAGAAACTTGCATTATATGAAGCAAGTGAGATAGTGGATGTTCAGGACATAAAGCACATAGCAGAAGATGAGAG
ATTGATTGGAGATACAGTTGAAAAGATTGCTGAGGACTGGAACGTTCAAAGAGGAGTTTTTTATGAACAAACTGGACTCGACCAACAGCTTGTTCCAGTCGAGGCAGAGC
AACAGTTACTAGAAGATTATGCCAATGAAAATTTTGATAAGGAACTTGAAAGAATGCTAACCGATGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAACTGGGCTGGTTCAAGAAATCCCCCAACCCAACCCAACAGCCCATGGAAGGATTTTCCTTTACTATGCATTGAGAAAGTTGTGGATGCAATGGATCTCTCTCC
ATTCAGGCTTGATATTGATGAGCTGATCAATGAATTTGCTGAGTGTGGATTTACATCTTTTGTTGATATGAAGAAAGTATGGATTGGAAGAAAATTCACTTACATATTTG
AGGCTGCTCCTTCTTCCAACTTGGCGTTCTTTATGCAATCAATCTATGCCCAATCAATTAGTCATATGCTCAGTACTGCTTCTTTGTCACACAGACTGGGTGGCCTTTTT
TGCCTCTACTGTCTTTATGAGACACAACCCTTTAAGCCTCCTTACAAAATCTACCTGTCTATTGGAGAGTTGAAGAAACTGAAGGAACTTGTTGTTGATGCAAAAGAAAA
TGATGTAAAAGTGGTATCTTCTGTGGTGAAACAAATGTTAGAAAAGAACATGTTCCTCTTTGGTTCTGTAGACATGAATGAGAGCGCTGCTTTGGAAACAGTGAATCAAC
TAACGGAATTGCAAAATGCCCGCATTCAAGTAGCCTATAATAAGTTGTTTGATGATACCCCGATAGAAAACTATATCCATATGGACATGGGGATGGAAGTTGGTTCGAAT
ATATTAAAAAAGATGTCAACAGATTATTCAGAGGCCAAGAAACTTGCATTATATGAAGCAAGTGAGATAGTGGATGTTCAGGACATAAAGCACATAGCAGAAGATGAGAG
ATTGATTGGAGATACAGTTGAAAAGATTGCTGAGGACTGGAACGTTCAAAGAGGAGTTTTTTATGAACAAACTGGACTCGACCAACAGCTTGTTCCAGTCGAGGCAGAGC
AACAGTTACTAGAAGATTATGCCAATGAAAATTTTGATAAGGAACTTGAAAGAATGCTAACCGATGTTTAACAAGGTATCTGCACTGAAAACCGACTCCAATCTAGAACA
TCGCTGAATGGTAATGAATAATTATCAGAAATGATAACTGGAACACAACCACCATAGATGGCTTCCACCACCCTCGGGCTTGCCACTTCAAAGCCACTAGGGCAGAGACA
AAACTTGCTTTCTCCAATCAATTTGGTGTAATTTTGGTTCTTAGGAAGATATTCATGAACTTGAACTTCTTTGTCCTTTTCCTTCCAATGTTGGATCAAGATCTTCCTGA
TGTATCCATGAGCTCCTCCTGCGAAGAAAGCTAGAATTGGGCGGTTTTCTGGTGGCTGGCCTAAGTCTGGTGGCCCTAACGTTCCAGGGTGGATGGTGATTTCTGGGAGT
GGAATGTCTATGTTGGGACGGAAGCCTTCTGTGACGTTTGCATTGCATACTACCCTGATGAAGTTTTTGAACAGCTGGGGGTTGGCATCTGAGATTTCTGGTGCCTTGAA
ATCGCCATTAGAAGTTTAAAGGAGGAAGCATTAGAAAAAATAAAAAATAAACGAAGACTTCATAACAAGTAGAATCTTACCCAATCATGGCATGAAACCATAAAATGATC
GGCACCATTGCTTCGGTTCCAATATGGATACCTGTTGGCAACAACTTGAATATAATCAGTTGTCACACGGTGCATCCGATCACGGCTGTAGTCAGTGGGAGAAGTGATTG
GCCTGTAAACGAAATGAATGATGTTGGTGATGCTCAAAGGAAGAAGAAATACATGAGCTTGATCAGGATGGCTGGCTCTAAAGGGGCTCTTGCTGCAATCTAACTCATCT
ATAAATTGGCCTTCAATGGCATATATGCTATTCAATGGACCGTCATGGACCAGAGGCTGTTCTCCTTCTCTGTAACTCCACACCTTGAACCTCTTCACCATTTCTATGTG
GCTTCTGCGTAACATTTTGGATATATACTTAGGTAAACTCAACTGATGAAAAGCATAAGCATTTCTGTAAATGGAGCCTCTGGGAATGTAAGTTTCTTTCTTCTCTGATG
TGAAGTTTTTCCACAGAACTGCATTTCGGATTGACGCTCGAGCTTCAGCCAAACTTGCTTCAATCATCTTCAAGCTCGTCGTCTTTTTCTTCTGCTCCAGAAACCCCAAA
ATGAAAACCAGAAAACACACAAGAAAATTTGACAACAGCAAAAACACTAGAGAAAAAAGGGGAGAGCCTTTTCTTTCATTCCTACTTTGATGAATATAGCTTTCATGGGC
TTGTTGCCTTCTCTCATGGGGGTTATGGGAAAGATAGAAGAGGCTAGTGGAAAAGCTTCAGTTGCTTGTGACAGGTCCAACAATGGTGGAATAGAAAGAAATGAAAGGAA
ACAAAGCAGAAGAAGAAGACTAGCTGGAAGTAGCAAGCAAGGGGGATGGCAGCTGAAGCTTGCCATGGCTGAACTCTTCATTTCAAGCTCTCTCTCTAATCTTTTTCCTT
TTTAAGTGCCCAAGGAAAGAGAAACTGAAGAGATTGCCAGTAGAAAAAAGTTTGAATTTCTTCCTTCTTCCTCCAAAATCGATGTAATCGAATCCAAAAGAGTGATTAAT
TAATGCATTTTGTTGAATAATATGGTGGAAACAGCTTGGAAAAAGTGATGCTTATAGACACCGGTACCTTAAATTAA
Protein sequenceShow/hide protein sequence
MVNWAGSRNPPTQPNSPWKDFPLLCIEKVVDAMDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSSNLAFFMQSIYAQSISHMLSTASLSHRLGGLF
CLYCLYETQPFKPPYKIYLSIGELKKLKELVVDAKENDVKVVSSVVKQMLEKNMFLFGSVDMNESAALETVNQLTELQNARIQVAYNKLFDDTPIENYIHMDMGMEVGSN
ILKKMSTDYSEAKKLALYEASEIVDVQDIKHIAEDERLIGDTVEKIAEDWNVQRGVFYEQTGLDQQLVPVEAEQQLLEDYANENFDKELERMLTDV