CuGenDBv2

Gene ID	Lsi11G003580
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	phosphopantothenoylcysteine decarboxylase subunit VHS3-like
Genome location	chr11:3748209..3751004
RNA-Seq Expression	Lsi11G003580
Synteny	Lsi11G003580
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7030356.1 hypothetical protein SDJN02_08703 [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-54

85.63

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Query:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDD
        MEL+G+  +ERTMWV SVLEAM +ETVF TANSLACLL A GA+LN ANA PGLAAIEERFPFSELHKKE PDQENKDGSETEDDEDDDDDDDANDQDDD
Subjt:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDD

Query:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK
        DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDD+DD+NG+D+++DEDE+EDE++ED+EEETPQPPAKKRK
Subjt:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK

XP_004139284.1 prostatic spermine-binding protein [Cucumis sativus]

5.4e-60

91.95

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Query:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDD
        MELD +  VERTMWVRSVLEAMAV+TVF TANSLACLL AAGAMLN+AN  PGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDD
Subjt:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDD

Query:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK
        DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDD+NGDDD+EDEDEDEDED+ED+EEETPQPPAKKRK
Subjt:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK

XP_008457268.1 PREDICTED: phosphopantothenoylcysteine decarboxylase subunit VHS3-like [Cucumis melo]

6.6e-58

89.66

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Query:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDD
        MELD +  VERTMW RSVLEAMAVETVF TANSLACLL  AGAMLN+AN  PGLAAIEERFPFSELHKKE PDQENKDGSETEDDEDDDDDDDANDQDDD
Subjt:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDD

Query:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK
        DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDD+NGDDD++D+DEDEDED+ED+EEETPQPPAKKRK
Subjt:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK

XP_023545361.1 nucleolin-like [Cucurbita pepo subsp. pepo]

4.0e-55

86.21

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Query:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDD
        MEL+G+  +ERTMWV SVLEAM +ETVFATANSLACLL A GA+LN ANA PGLAAIEERFPFSELHKKE PDQENKDGSETEDDEDDDDDDDANDQDDD
Subjt:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDD

Query:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK
        DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDD+DD+NG+D+++DEDE+EDE++ED+EEETPQPPAKKRK
Subjt:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK

XP_038891026.1 prostatic spermine-binding protein-like [Benincasa hispida]

1.2e-59

91.95

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Query:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDD
        MELDG+  VERTMWVRSVLEAMAVET  ATANS ACLL AAGAMLNVANA PGLAAIEERFPFSELHKK+SPDQENKDGSETEDDEDDDD+DDANDQDDD
Subjt:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDD

Query:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK
        DDDEDFSGGEE DDGDPEDDPEANGDGRAGGDEEDDDDDD+NGDDD+EDEDED+DEDDEDDEEETPQPPAKKRK
Subjt:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C539 phosphopantothenoylcysteine decarboxylase subunit VHS3-like

3.2e-58

89.66

Show/hide

Query:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDD
        MELD +  VERTMW RSVLEAMAVETVF TANSLACLL  AGAMLN+AN  PGLAAIEERFPFSELHKKE PDQENKDGSETEDDEDDDDDDDANDQDDD
Subjt:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDD

Query:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK
        DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDD+NGDDD++D+DEDEDED+ED+EEETPQPPAKKRK
Subjt:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK

A0A6J1FIZ1 prostatic spermine-binding protein-like

2.9e-51

82.39

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Query:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDD
        MEL G+  V+RTMWVRSVLEA+AVETVF TANSLACLL AAGA+LN ANA PG AAIEE FPF+ELH+K+ PDQENKDGSETEDD++DDDDDDANDQDDD
Subjt:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDD

Query:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEE--DDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK
        DDDEDFSGGEEGDDGDPEDDPEANGDG AGGD++  D+DDDD+NGDDD++DE+E+EDEDDEDDEEETPQPP KKRK
Subjt:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEE--DDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK

A0A6J1G306 mitotic apparatus protein p62-like

6.9e-53

84.48

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Query:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDD
        MEL+G+  +ERTMWV SVLEAM +ETVF TANSLACLL A GA+LN ANA PGLAAIEERFPFSELHKKE PDQENKDGSETEDDEDDDDDDDANDQ DD
Subjt:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDD

Query:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK
        DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDD+DD+NG+D+++DE+E+EDE++ED+EEETPQPPAKKRK
Subjt:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK

A0A6J1HQJ4 prostatic spermine-binding protein-like

7.1e-50

82.02

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Query:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDD
        MEL G+  V+RTMWVRSVLEA+AVETVF TANSLACLL AAGA+LN ANA PG AAIEE FPF+ELH+K+SPDQENKDGSETEDD++DDDDDDANDQDDD
Subjt:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDD

Query:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGD----EEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK
        DDDEDFSGGEEGDDGDPEDDPEANGDG AGGD    +EDDDDDD+NGDD   DE+E+ED+DDEDDEEETPQPP KKRK
Subjt:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGD----EEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK

A0A6J1KGN6 prostatic spermine-binding protein-like

1.4e-53

83.91

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Query:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDD
        MEL+G+  +ERTMWV SVLEAM +ETVF TANSLACLL A GA+LN ANA PGLAAIEERFPFSELHKK+ P+QENKDGSETEDDEDDDDDDDANDQDDD
Subjt:  MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDD

Query:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK
        DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDD+DD+NG+D+++DE+E+EDE++ED+EEETPQPPAKKRK
Subjt:  DDDEDFSGGEEGDDGDPEDDPEANGDGRAGGDEEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G11910.1 unknown protein

3.3e-07

45.45

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Query:  WVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDDDDDEDFSGGEEGD
        W  SV E+     +     +LACLL+ A ++L       GL A+++R    E +K+ S  +ENKD S+++DD+DD+D D+ +D +DD +DEDFSGG EGD
Subjt:  WVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDDDDDEDFSGGEEGD

Query:  DG----DPEDDPEANGDGRAGGDEEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK
        +G    DPEDDP  NG G  G D+EDDDD++ + DD++ED +++E++DDE+D+++  QPP+KKRK
Subjt:  DG----DPEDDPEANGDGRAGGDEEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK

AT2G11910.2 unknown protein

3.3e-07

45.45

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Query:  WVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDDDDDEDFSGGEEGD
        W  SV E+     +     +LACLL+ A ++L       GL A+++R    E +K+ S  +ENKD S+++DD+DD+D D+ +D +DD +DEDFSGG EGD
Subjt:  WVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDDDDDEDFSGGEEGD

Query:  DG----DPEDDPEANGDGRAGGDEEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK
        +G    DPEDDP  NG G  G D+EDDDD++ + DD++ED +++E++DDE+D+++  QPP+KKRK
Subjt:  DG----DPEDDPEANGDGRAGGDEEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAGTTGGACGGTCTAGACTCTGTGGAGAGAACCATGTGGGTGCGCTCTGTTTTGGAAGCTATGGCGGTGGAGACTGTTTTTGCCACTGCTAACTCCCTTGCTTGCCT
TCTGGTGGCGGCAGGAGCTATGTTAAATGTTGCCAATGCTGCACCAGGATTGGCTGCAATTGAGGAAAGGTTTCCTTTCTCTGAACTTCACAAAAAGGAAAGCCCTGATC
AGGAAAACAAAGATGGAAGCGAAACAGAGGATGATGAAGATGATGACGATGACGATGATGCAAACGATCAGGATGACGACGACGACGATGAAGATTTCTCTGGAGGTGAA
GAAGGGGATGACGGTGATCCAGAGGATGATCCTGAAGCAAATGGAGATGGAAGAGCTGGAGGTGATGAGGAAGATGACGATGACGATGATGAAAATGGAGATGACGACAA
CGAAGATGAGGACGAGGATGAAGATGAGGACGACGAAGATGATGAGGAGGAAACACCCCAGCCACCAGCCAAGAAGAGGAAGTGA

mRNA sequence

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ACAAAAACACAAAGCCCTAATCAGACCAAACCCTAGGGTTTACCCTAACTGGACTAAACCCAACTTTTCTCCCAAATCTCAGAAAACCCATTCCCCTTTCTTCCTCTCTC
TCTCTCTCTCTCACTCACTGCCAGAGGCCCATCTCTCTCTCTCTCTCTCTCTCTGCGAGCTTCCTTCCTCTCTATCTCTCCGTGTTTCTTTCTTGCTCTTCTCCATTTCT
GTTCACTTTTGAGCTCGTTTTTGTGGCAATGGAGTTGGACGGTCTAGACTCTGTGGAGAGAACCATGTGGGTGCGCTCTGTTTTGGAAGCTATGGCGGTGGAGACTGTTT
TTGCCACTGCTAACTCCCTTGCTTGCCTTCTGGTGGCGGCAGGAGCTATGTTAAATGTTGCCAATGCTGCACCAGGATTGGCTGCAATTGAGGAAAGGTTTCCTTTCTCT
GAACTTCACAAAAAGGAAAGCCCTGATCAGGAAAACAAAGATGGAAGCGAAACAGAGGATGATGAAGATGATGACGATGACGATGATGCAAACGATCAGGATGACGACGA
CGACGATGAAGATTTCTCTGGAGGTGAAGAAGGGGATGACGGTGATCCAGAGGATGATCCTGAAGCAAATGGAGATGGAAGAGCTGGAGGTGATGAGGAAGATGACGATG
ACGATGATGAAAATGGAGATGACGACAACGAAGATGAGGACGAGGATGAAGATGAGGACGACGAAGATGATGAGGAGGAAACACCCCAGCCACCAGCCAAGAAGAGGAAG
TGAGAATATCGATTGGCCCTCCACATTGTCGAGTTTCGAGTTTCGAGTAGTGAGGGAAGTTTAGCTAGTGTTAGGCTTTGCTTTAGGGGGTAGGAACATTGTCGGCCTTG
ATGGTAATGAACTTCTCAACTTATGTTTGTGATGTTGTGGATCCATATTATATATAACAATTTCTTTTGCTAAAATAGTTAGTACTCTTATGTTGTCAGAATCTGAGATT
TTTTGGCTTCATGCAAATTTCCATTGAGGTAAAGAAGACAGCAAAATTGTGATTTGAAGCCAGTGGGTTGAACAGGTTGGTTAGTTAAAATCGTTTTTTTTGTTTGAAAA
CAGAAAATCAGTGTTACTAAACTAATATATCTTTTCAAAAATTGATAATTGATTTTCTTAAATATTTAACTGAGCTC

Protein sequence

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MELDGLDSVERTMWVRSVLEAMAVETVFATANSLACLLVAAGAMLNVANAAPGLAAIEERFPFSELHKKESPDQENKDGSETEDDEDDDDDDDANDQDDDDDDEDFSGGE
EGDDGDPEDDPEANGDGRAGGDEEDDDDDDENGDDDNEDEDEDEDEDDEDDEEETPQPPAKKRK

Lsi11G003580 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome