; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G004040 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G004040
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr11:4223879..4228524
RNA-Seq ExpressionLsi11G004040
SyntenyLsi11G004040
Gene Ontology termsGO:0000076 - DNA replication checkpoint (biological process)
GO:0006974 - cellular response to DNA damage stimulus (biological process)
GO:0043111 - replication fork arrest (biological process)
GO:0048478 - replication fork protection (biological process)
GO:0031298 - replication fork protection complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR012923 - Chromosome segregation in meiosis protein 3
IPR036875 - Zinc finger, CCHC-type superfamily
IPR040038 - TIPIN/Csm3/Swi3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599343.1 TIMELESS-interacting protein, partial [Cucurbita argyrosperma subsp. sororia]7.4e-12888.17Show/hide
Query:  MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
        M+KDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP    NSSRPP SSAPAAPSKVAEKPKKAPR RPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
Subjt:  MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI

Query:  SDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVEN--DDDVNNEKEAKDPEDIFDNQEEASLRNNGADD
        SDLENLIGLYREWHSHILPYY FEHFVHKVEQVAATKRVKMCLGELRE+VARGGDPTKWRE+P+ N  DDD+NNE EAKD E +FDNQEEAS +NNGADD
Subjt:  SDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVEN--DDDVNNEKEAKDPEDIFDNQEEASLRNNGADD

Query:  IEENMLQEVYEKAT-EEPVQNLQSDSFTNGETMEDVANQEPNTSNSSETQLTEEQRGRMEANRLKALERAAAKARSLPT
        IEE+MLQEVYEKAT EEP+ NLQSDSFT GETME V NQEPNTSNS+ET LTE+QR RMEANRLKALERAAAKARS PT
Subjt:  IEENMLQEVYEKAT-EEPVQNLQSDSFTNGETMEDVANQEPNTSNSSETQLTEEQRGRMEANRLKALERAAAKARSLPT

XP_004139395.1 TIMELESS-interacting protein [Cucumis sativus]2.2e-13290Show/hide
Query:  MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
        MEKDN AV APTGC+KCGKPGHWSRDCPSSAPNPNPTSNSS P FSS PAAPSK  EKPKKAPRTRPKLTPELLLS+DGLGYVLRHFPRAFKYRGRGHEI
Subjt:  MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI

Query:  SDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPV--ENDDDVNNEKEAKDPEDIFDNQEEASLRNNGADD
        +DLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAP+  ++DDDVNNEKEAKDP+D+FDNQEEASLRNNGADD
Subjt:  SDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPV--ENDDDVNNEKEAKDPEDIFDNQEEASLRNNGADD

Query:  IEENMLQEVYEKATEEPVQNLQSDSFTNGETMEDVANQEPNTSNSSET-QLTEEQRGRMEANRLKALERAAAKARSLPTV
        IEE+MLQEVYEKATEEP+QN QSDS T G TME VANQEP TSNSSET +LTEEQR RMEANRLKALERAAAKARSLPTV
Subjt:  IEENMLQEVYEKATEEPVQNLQSDSFTNGETMEDVANQEPNTSNSSET-QLTEEQRGRMEANRLKALERAAAKARSLPTV

XP_008456510.1 PREDICTED: TIMELESS-interacting protein [Cucumis melo]7.6e-13390.46Show/hide
Query:  MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
        M+KDN A+AAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSS+PPFSSAPAAPSK  EKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
Subjt:  MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI

Query:  SDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVEN-DDDVNNEKEAKDPEDIFDNQEEASLRNNGADDI
        SDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAP+ N DDDVNNEKEAKDPE +FDN EEASLRNNGADDI
Subjt:  SDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVEN-DDDVNNEKEAKDPEDIFDNQEEASLRNNGADDI

Query:  EENMLQEVYEKATEEPVQNLQSDSFTNGETMEDVANQEPN----TSNSSET-QLTEEQRGRMEANRLKALERAAAKARSLPTV
        EE+MLQEVYEKATEEP+QN QSDS T G TME VANQEPN    TSNSSET +LTEEQR RMEANRLKALERAAAKARSL TV
Subjt:  EENMLQEVYEKATEEPVQNLQSDSFTNGETMEDVANQEPN----TSNSSET-QLTEEQRGRMEANRLKALERAAAKARSLPTV

XP_022946681.1 TIMELESS-interacting protein [Cucurbita moschata]9.0e-12687.5Show/hide
Query:  MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
        M+KDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP    NSS PP SSAPAAPSKVAEKPKKAPR RPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
Subjt:  MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI

Query:  SDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVEN--DDDVNNEKEAKDPEDIFDNQEEASLRNNGADD
        SDLENLIGLYREWHSHILPYY FEHFVHKVEQVAATKRVKMCLGELRE+VARGGDPTKWRE+P+ N  DDD+NNE EAKD E +FDNQEEAS +NNGADD
Subjt:  SDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVEN--DDDVNNEKEAKDPEDIFDNQEEASLRNNGADD

Query:  IEENMLQEVYEKAT-EEPVQNLQSDSFTNGETMEDVANQ-EPNTSNSSETQLTEEQRGRMEANRLKALERAAAKARSLPT
        IEE+MLQEVYEKAT EEP+ NLQSDSFT GETME V NQ EPNTSNS+ET LTE+QR RMEANRLKALERAAAKARS PT
Subjt:  IEENMLQEVYEKAT-EEPVQNLQSDSFTNGETMEDVANQ-EPNTSNSSETQLTEEQRGRMEANRLKALERAAAKARSLPT

XP_038889611.1 TIMELESS-interacting protein [Benincasa hispida]5.6e-13689.46Show/hide
Query:  MEKDNAAVAAPTGCYKCGKPGHWSR-----------------DCPSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYV
        MEKDNAAVAAPTGCYKCGKPGHWSR                 DCPSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYV
Subjt:  MEKDNAAVAAPTGCYKCGKPGHWSR-----------------DCPSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYV

Query:  LRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVENDDDVNNEKEAKDPEDIF
        LRHFPR FKYRGRGHEISDL NLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAP+ NDDDVNNEKEAKDPE IF
Subjt:  LRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVENDDDVNNEKEAKDPEDIF

Query:  DNQEEASLRNNGADDIEENMLQEVYEKATEEPVQNLQSDSFTNGETMEDVANQEPNTSNSSETQLTEEQRGRMEANRLKALERAAAKARSLPTV
        DNQEEA LRNNGADDIEE+MLQEVYEKATEEP QN+QSDSFT GET+E VANQEP  SNSSETQLTEEQRGRMEANRLKALERAAAKARSLPTV
Subjt:  DNQEEASLRNNGADDIEENMLQEVYEKATEEPVQNLQSDSFTNGETMEDVANQEPNTSNSSETQLTEEQRGRMEANRLKALERAAAKARSLPTV

TrEMBL top hitse value%identityAlignment
A0A0A0LI96 CCHC-type domain-containing protein1.1e-13290Show/hide
Query:  MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
        MEKDN AV APTGC+KCGKPGHWSRDCPSSAPNPNPTSNSS P FSS PAAPSK  EKPKKAPRTRPKLTPELLLS+DGLGYVLRHFPRAFKYRGRGHEI
Subjt:  MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI

Query:  SDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPV--ENDDDVNNEKEAKDPEDIFDNQEEASLRNNGADD
        +DLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAP+  ++DDDVNNEKEAKDP+D+FDNQEEASLRNNGADD
Subjt:  SDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPV--ENDDDVNNEKEAKDPEDIFDNQEEASLRNNGADD

Query:  IEENMLQEVYEKATEEPVQNLQSDSFTNGETMEDVANQEPNTSNSSET-QLTEEQRGRMEANRLKALERAAAKARSLPTV
        IEE+MLQEVYEKATEEP+QN QSDS T G TME VANQEP TSNSSET +LTEEQR RMEANRLKALERAAAKARSLPTV
Subjt:  IEENMLQEVYEKATEEPVQNLQSDSFTNGETMEDVANQEPNTSNSSET-QLTEEQRGRMEANRLKALERAAAKARSLPTV

A0A1S3C4P4 TIMELESS-interacting protein3.7e-13390.46Show/hide
Query:  MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
        M+KDN A+AAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSS+PPFSSAPAAPSK  EKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
Subjt:  MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI

Query:  SDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVEN-DDDVNNEKEAKDPEDIFDNQEEASLRNNGADDI
        SDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAP+ N DDDVNNEKEAKDPE +FDN EEASLRNNGADDI
Subjt:  SDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVEN-DDDVNNEKEAKDPEDIFDNQEEASLRNNGADDI

Query:  EENMLQEVYEKATEEPVQNLQSDSFTNGETMEDVANQEPN----TSNSSET-QLTEEQRGRMEANRLKALERAAAKARSLPTV
        EE+MLQEVYEKATEEP+QN QSDS T G TME VANQEPN    TSNSSET +LTEEQR RMEANRLKALERAAAKARSL TV
Subjt:  EENMLQEVYEKATEEPVQNLQSDSFTNGETMEDVANQEPN----TSNSSET-QLTEEQRGRMEANRLKALERAAAKARSLPTV

A0A5D3BGW4 TIMELESS-interacting protein3.7e-13390.46Show/hide
Query:  MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
        M+KDN A+AAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSS+PPFSSAPAAPSK  EKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
Subjt:  MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI

Query:  SDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVEN-DDDVNNEKEAKDPEDIFDNQEEASLRNNGADDI
        SDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAP+ N DDDVNNEKEAKDPE +FDN EEASLRNNGADDI
Subjt:  SDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVEN-DDDVNNEKEAKDPEDIFDNQEEASLRNNGADDI

Query:  EENMLQEVYEKATEEPVQNLQSDSFTNGETMEDVANQEPN----TSNSSET-QLTEEQRGRMEANRLKALERAAAKARSLPTV
        EE+MLQEVYEKATEEP+QN QSDS T G TME VANQEPN    TSNSSET +LTEEQR RMEANRLKALERAAAKARSL TV
Subjt:  EENMLQEVYEKATEEPVQNLQSDSFTNGETMEDVANQEPN----TSNSSET-QLTEEQRGRMEANRLKALERAAAKARSLPTV

A0A6J1G4B9 TIMELESS-interacting protein4.4e-12687.5Show/hide
Query:  MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
        M+KDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP    NSS PP SSAPAAPSKVAEKPKKAPR RPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
Subjt:  MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI

Query:  SDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVEN--DDDVNNEKEAKDPEDIFDNQEEASLRNNGADD
        SDLENLIGLYREWHSHILPYY FEHFVHKVEQVAATKRVKMCLGELRE+VARGGDPTKWRE+P+ N  DDD+NNE EAKD E +FDNQEEAS +NNGADD
Subjt:  SDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVEN--DDDVNNEKEAKDPEDIFDNQEEASLRNNGADD

Query:  IEENMLQEVYEKAT-EEPVQNLQSDSFTNGETMEDVANQ-EPNTSNSSETQLTEEQRGRMEANRLKALERAAAKARSLPT
        IEE+MLQEVYEKAT EEP+ NLQSDSFT GETME V NQ EPNTSNS+ET LTE+QR RMEANRLKALERAAAKARS PT
Subjt:  IEENMLQEVYEKAT-EEPVQNLQSDSFTNGETMEDVANQ-EPNTSNSSETQLTEEQRGRMEANRLKALERAAAKARSLPT

A0A6J1KG39 TIMELESS-interacting protein1.7e-12587.14Show/hide
Query:  MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
        M+KDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNP    N SRPP SSAPAAP KVAEKPKKAPR RPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI
Subjt:  MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEI

Query:  SDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVEN--DDDVNNEKEAKDPEDIFDNQEEASLRNNGADD
        SDLENLIGLYREWHSHILPYY FEHFVHKVEQVAATKRVKMCLGELRE+VARGGDPTKWRE+P+ N  DDD+NNE EAKD E +FDNQEEASL+NNGADD
Subjt:  SDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVEN--DDDVNNEKEAKDPEDIFDNQEEASLRNNGADD

Query:  IEENMLQEVYEKAT-EEPVQNLQSDSFTNGETMEDVANQ-EPNTSNSSETQLTEEQRGRMEANRLKALERAAAKARSLPT
        IEE+MLQEVYEKAT EEP+ NLQSDSFT GET+E V NQ EPNTSNS+ET LTE+QR RMEANRLKALERAAAKARS PT
Subjt:  IEENMLQEVYEKAT-EEPVQNLQSDSFTNGETMEDVANQ-EPNTSNSSETQLTEEQRGRMEANRLKALERAAAKARSLPT

SwissProt top hitse value%identityAlignment
Q3ZCC4 TIMELESS-interacting protein1.4e-0728.63Show/hide
Query:  PNPNPTS------NSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYSFEH
        P P P S        + P   S   AP  V  K +   R  PKL  E L+SE GL   LRH     K++G+GHE  DL+ LI     W   + P   FE 
Subjt:  PNPNPTS------NSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYSFEH

Query:  FVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVENDDDVNNEKEAKDPEDIFDNQEEASLRNNGADDIEENMLQEVYEKATEEPVQNLQSDSFT
        F+ +VE +   K V+ CL  +R             + P+ ++D V+N  E ++              NNG D              T   + +  ++S+ 
Subjt:  FVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVENDDDVNNEKEAKDPEDIFDNQEEASLRNNGADDIEENMLQEVYEKATEEPVQNLQSDSFT

Query:  NGETMEDVANQEPNTSNSSETQLTEEQRGRMEANRLKALERAAAKARS
        + E            ++ S   LTEE++ R+E N+  ALER  AK  S
Subjt:  NGETMEDVANQEPNTSNSSETQLTEEQRGRMEANRLKALERAAAKARS

Q4QR88 TIMELESS-interacting protein5.7e-0626.67Show/hide
Query:  PTSNSSRPPFSSAP--AAPSKVAEKPKK-APRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYSFEHFVHKVEQ
        P  +  R P  + P   + + V   PK+   R  PKL    L SE GL   LRH     K++G+GHE  DL+ LI     W   + P   FE F+ +VE 
Subjt:  PTSNSSRPPFSSAP--AAPSKVAEKPKK-APRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYSFEHFVHKVEQ

Query:  VAATKRVKMCLGELRERVARGGDPTKWREAPVENDDDVNNEKEAKDPEDI------FD-----NQEEASLRNNGADDIEENMLQEVYEKATEEPVQNLQS
        +   K V+ CL  +R             + P+ ++D VNN  E ++   +      FD     + +     +  + ++ E   Q + EK  +  ++  Q+
Subjt:  VAATKRVKMCLGELRERVARGGDPTKWREAPVENDDDVNNEKEAKDPEDI------FD-----NQEEASLRNNGADDIEENMLQEVYEKATEEPVQNLQS

Query:  DSFTNGETME-DVANQEPNTSNSSE
           +N +++E DV  +E +T  + E
Subjt:  DSFTNGETME-DVANQEPNTSNSSE

Q6DBR4 TIMELESS-interacting protein1.4e-0428.04Show/hide
Query:  SKVAEKP----KKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRE
        SK+AE P    +   R RPKL    L+SE GL   LR      K++G+GHE  +L+ L+     W   + P   FE F+ KVE +   K V+ CL  +R 
Subjt:  SKVAEKP----KKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRE

Query:  RVARGGDPTKWREAPVENDDDVNNEKEAKDPED--IFDNQEEASLRNNGADDIEENMLQEVYEKATEEPVQNLQSDSFTNGETMEDVANQEPNTSNSSET
         +    +     EA ++  ++     +   PED  I      ASL       IE N    +  +  ++  + L+S   +  E  +     EP+TS+S   
Subjt:  RVARGGDPTKWREAPVENDDDVNNEKEAKDPED--IFDNQEEASLRNNGADDIEENMLQEVYEKATEEPVQNLQSDSFTNGETMEDVANQEPNTSNSSET

Query:  QLTEEQRGRMEANR
        Q   E+  +  +N+
Subjt:  QLTEEQRGRMEANR

Q91WA1 TIMELESS-interacting protein1.5e-0629.46Show/hide
Query:  PTSNSSRPPFSSAP--AAPSKVAEKPKK-APRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYSFEHFVHKVEQ
        P ++  R P  + P   + S V   PK+   R  PKL    L SE GL   LRH     K++G+GHE  DL+ LI     W   + P   FE F+ +VE 
Subjt:  PTSNSSRPPFSSAP--AAPSKVAEKPKK-APRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYSFEHFVHKVEQ

Query:  VAATKRVKMCLGELRERVARGGDPTKWREAPVENDDDVNNEKEAKDPEDIFDNQEEASLRNNGADDIEENMLQEVYEKATEEPVQNLQSDSFTNGETMED
        +   K V+ CL  +R             + P+ ++D VNN  E  +               NG D                  V     D F    +   
Subjt:  VAATKRVKMCLGELRERVARGGDPTKWREAPVENDDDVNNEKEAKDPEDIFDNQEEASLRNNGADDIEENMLQEVYEKATEEPVQNLQSDSFTNGETMED

Query:  VANQEPNTSNSSETQLTEEQRGRMEANRLKALERAAAKARS
            EP  S      LTEEQ+ R+E N+  ALER  AK  S
Subjt:  VANQEPNTSNSSETQLTEEQRGRMEANRLKALERAAAKARS

Q9BVW5 TIMELESS-interacting protein8.8e-0728.46Show/hide
Query:  PSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYSFEHFV
        P  A         + P   S   AP +V  K +   R  PKL  + L+SE GL   LRH     K++G+GHE  DL+ LI     W   + P   FE F+
Subjt:  PSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLYREWHSHILPYYSFEHFV

Query:  HKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVENDDDVNNEKEAKDPEDIFDNQEEASLRNNGADDIEENMLQEVYEKATEEPVQNLQSDSFTNG
         +VE + + K V+ CL  +R             + P+ ++D V+N                        D++ EN          E  V + + D F   
Subjt:  HKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVENDDDVNNEKEAKDPEDIFDNQEEASLRNNGADDIEENMLQEVYEKATEEPVQNLQSDSFTNG

Query:  ETMEDVANQEPNTSNSSETQLTEEQRGRMEANRLKALERAAAKARS
          + +++  E   S  S + LTEEQ+ R+E N+  ALER  AK  S
Subjt:  ETMEDVANQEPNTSNSSETQLTEEQRGRMEANRLKALERAAAKARS

Arabidopsis top hitse value%identityAlignment
AT3G02820.1 zinc knuckle (CCHC-type) family protein3.7e-6153.6Show/hide
Query:  AAPTGCYKCGKPGHWSRDCPSSAP--NPNPTSNSSRP---PFSSAPAAPSK----VAEKPK--KAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRG
        +APTGC+KCG+PGHWSRDCPSSAP    N  S+SS P   P +    + SK    +A  PK  K    RPKLTPELLLSEDGLGYVLR+FP++FKYRGRG
Subjt:  AAPTGCYKCGKPGHWSRDCPSSAP--NPNPTSNSSRP---PFSSAPAAPSK----VAEKPK--KAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRG

Query:  HEISDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVEN---DDDVNNEKEAKDPEDIFDNQEEASLRNN
         E+SDL NLI LY EWH+H+LPYYSF+HFVHKV+QVA+TKRVK C+ ELRERVA G DP K  E   EN    DD + ++ + D E+I     +A   + 
Subjt:  HEISDLENLIGLYREWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVEN---DDDVNNEKEAKDPEDIFDNQEEASLRNN

Query:  GADDIEENMLQEVYEKATEEPVQNLQSDSFTNGETMEDVANQEPNTSNSSE--TQLTEEQRGRMEANRLKALERAAAK
         AD  E++ML E+++ A++ P      D  ++  T E  A  E N   + E    ++EEQR RMEANRLKALERA A+
Subjt:  GADDIEENMLQEVYEKATEEPVQNLQSDSFTNGETMEDVANQEPNTSNSSE--TQLTEEQRGRMEANRLKALERAAAK

AT3G42860.1 zinc knuckle (CCHC-type) family protein4.2e-0457.14Show/hide
Query:  AVAAPTGCYKCGKPGHWSRDCPSSAPNP
        + +A   C+KCGKPGHWSRDC + + NP
Subjt:  AVAAPTGCYKCGKPGHWSRDCPSSAPNP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGGACAACGCCGCCGTCGCAGCGCCGACGGGATGCTACAAGTGCGGGAAGCCGGGCCACTGGTCTCGTGATTGCCCTTCCTCTGCTCCAAATCCCAATCCCAC
TTCCAATTCTTCAAGACCTCCTTTCTCCTCTGCTCCTGCTGCCCCTTCAAAAGTTGCAGAGAAGCCCAAGAAAGCCCCCAGAACCAGGCCCAAGCTCACTCCTGAGCTAC
TCCTTTCCGAGGATGGTCTAGGTTACGTCCTTCGCCATTTCCCTCGCGCTTTCAAGTATCGCGGCCGTGGACACGAGATCAGTGATTTGGAAAACCTTATTGGCTTATAC
AGGGAATGGCATTCTCATATACTCCCTTATTACTCTTTCGAGCATTTTGTACACAAGGTGGAACAAGTAGCTGCTACGAAACGTGTAAAGATGTGTCTTGGAGAATTAAG
AGAGAGAGTTGCCAGGGGAGGGGATCCTACAAAGTGGCGTGAGGCACCAGTTGAAAATGATGATGATGTCAATAATGAAAAAGAAGCCAAAGACCCGGAAGACATATTCG
ATAATCAGGAAGAAGCTTCTTTGAGGAATAATGGTGCTGATGACATTGAAGAGAACATGCTTCAGGAAGTTTATGAGAAAGCTACGGAAGAACCAGTGCAGAATTTACAA
AGTGATTCCTTCACCAATGGTGAAACTATGGAAGATGTGGCCAACCAAGAACCAAACACTAGCAATTCAAGTGAAACTCAACTCACAGAGGAACAGAGAGGTCGAATGGA
AGCAAACAGGTTAAAGGCATTAGAAAGAGCTGCAGCCAAGGCCCGCTCGTTGCCGACTGTCTGA
mRNA sequenceShow/hide mRNA sequence
AAGAAATTTTCCCCATAGGGTTTATCATGTTTTGTTCATAATTACAACACTCAATTCAGATTCTTCAGAAAATTTTCCAATTTCCTCATCCGATCGGATCAAACCGCTCC
AAGCCGACTGAAGTTTGCGAATAGCGAGAGGGATCTATCATGGAGAAGGACAACGCCGCCGTCGCAGCGCCGACGGGATGCTACAAGTGCGGGAAGCCGGGCCACTGGTC
TCGTGATTGCCCTTCCTCTGCTCCAAATCCCAATCCCACTTCCAATTCTTCAAGACCTCCTTTCTCCTCTGCTCCTGCTGCCCCTTCAAAAGTTGCAGAGAAGCCCAAGA
AAGCCCCCAGAACCAGGCCCAAGCTCACTCCTGAGCTACTCCTTTCCGAGGATGGTCTAGGTTACGTCCTTCGCCATTTCCCTCGCGCTTTCAAGTATCGCGGCCGTGGA
CACGAGATCAGTGATTTGGAAAACCTTATTGGCTTATACAGGGAATGGCATTCTCATATACTCCCTTATTACTCTTTCGAGCATTTTGTACACAAGGTGGAACAAGTAGC
TGCTACGAAACGTGTAAAGATGTGTCTTGGAGAATTAAGAGAGAGAGTTGCCAGGGGAGGGGATCCTACAAAGTGGCGTGAGGCACCAGTTGAAAATGATGATGATGTCA
ATAATGAAAAAGAAGCCAAAGACCCGGAAGACATATTCGATAATCAGGAAGAAGCTTCTTTGAGGAATAATGGTGCTGATGACATTGAAGAGAACATGCTTCAGGAAGTT
TATGAGAAAGCTACGGAAGAACCAGTGCAGAATTTACAAAGTGATTCCTTCACCAATGGTGAAACTATGGAAGATGTGGCCAACCAAGAACCAAACACTAGCAATTCAAG
TGAAACTCAACTCACAGAGGAACAGAGAGGTCGAATGGAAGCAAACAGGTTAAAGGCATTAGAAAGAGCTGCAGCCAAGGCCCGCTCGTTGCCGACTGTCTGATTCATGT
GCTTGCTTTATGTGGATTTCACTTCATTGCAAAGGCCATATTAAACTAACATTCAAAGATAGTTTTTGGCTAGTGAAGGCTCAACCACCTTAGGGAGTTCTTCCTTGAAT
CTCCAAAAATTTCTAAATTTGGACTACTGAGTCTTTAGAGTGTCAATTAGGAATTTTACTTGCTCATTTTGAAAGGTTATCATTAATCAATTGAGCTTGCATAAAAGGAG
ATAAAGTCTCAATAAATGGCTAAGAGGTCATGGGTTCAATCCGTGGTGGCCACCTACTTAGTAATTAATTTCTTATGAGTTTTCTTGACACCCAAATGTTGTAGGGTCAG
GTGGGTTGTCCCGTGAGATTAGTTGAGGCCAGCGTATGCTGGTCTGGACAGTCACGAATATAAAAAAGAAAAAAAAATCAATTGAGCTTGCATTGTAAATTAATAATATT
TTTTAGTCCAACGAAAGGAGAGGCACGAGGTATATGTTAACTATATTTTCCTTATTGGACATTTTATAG
Protein sequenceShow/hide protein sequence
MEKDNAAVAAPTGCYKCGKPGHWSRDCPSSAPNPNPTSNSSRPPFSSAPAAPSKVAEKPKKAPRTRPKLTPELLLSEDGLGYVLRHFPRAFKYRGRGHEISDLENLIGLY
REWHSHILPYYSFEHFVHKVEQVAATKRVKMCLGELRERVARGGDPTKWREAPVENDDDVNNEKEAKDPEDIFDNQEEASLRNNGADDIEENMLQEVYEKATEEPVQNLQ
SDSFTNGETMEDVANQEPNTSNSSETQLTEEQRGRMEANRLKALERAAAKARSLPTV