; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G004110 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G004110
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionc-Myc-binding protein homolog
Genome locationchr11:4286648..4290399
RNA-Seq ExpressionLsi11G004110
SyntenyLsi11G004110
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR026060 - Associate of Myc 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063570.1 C-Myc-binding protein-like protein [Cucumis melo var. makuwa]3.1e-4170.55Show/hide
Query:  EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKETFYTFGLTGDKVHKHSSGSSVS
        EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPS AEYE LQSEMADLQVKYDELLATHKET                     
Subjt:  EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKETFYTFGLTGDKVHKHSSGSSVS

Query:  FLYIENLLKFIGRYVVLQLEELKSSHNITITSIKDTTDDEDENDKL
                         +LEELKSSHNIT+TS KDTTDDEDENDKL
Subjt:  FLYIENLLKFIGRYVVLQLEELKSSHNITITSIKDTTDDEDENDKL
KAG7021180.1 C-Myc-binding protein [Cucurbita argyrosperma subsp. argyrosperma]3.2e-3864.86Show/hide
Query:  ITEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKETFYTFGLTGDKVHKHSSGSS
        I EKEAKKEAFRKYLESNG+VDALTKVLVAL+EQ+DKPSSALEFIQQRLGGPS+AEYE LQSEMADLQVKYDELLATHKET                   
Subjt:  ITEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKETFYTFGLTGDKVHKHSSGSS

Query:  VSFLYIENLLKFIGRYVVLQLEELKSSHNITITSIKDTTDDEDENDKL
                           +LE LKSSHN+T  S KDTTDDE+ENDK+
Subjt:  VSFLYIENLLKFIGRYVVLQLEELKSSHNITITSIKDTTDDEDENDKL
XP_004139253.1 c-Myc-binding protein homolog isoform X1 [Cucumis sativus]7.5e-4068.49Show/hide
Query:  EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKETFYTFGLTGDKVHKHSSGSSVS
        EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPS AEYE LQSEMADLQVKYDELLATHKET                     
Subjt:  EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKETFYTFGLTGDKVHKHSSGSSVS

Query:  FLYIENLLKFIGRYVVLQLEELKSSHNITITSIKDTTDDEDENDKL
                         +LEELK SHN+T+TS KDTTDDE+ENDKL
Subjt:  FLYIENLLKFIGRYVVLQLEELKSSHNITITSIKDTTDDEDENDKL
XP_008456430.1 PREDICTED: C-Myc-binding protein homolog [Cucumis melo]3.1e-4170.55Show/hide
Query:  EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKETFYTFGLTGDKVHKHSSGSSVS
        EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPS AEYE LQSEMADLQVKYDELLATHKET                     
Subjt:  EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKETFYTFGLTGDKVHKHSSGSSVS

Query:  FLYIENLLKFIGRYVVLQLEELKSSHNITITSIKDTTDDEDENDKL
                         +LEELKSSHNIT+TS KDTTDDEDENDKL
Subjt:  FLYIENLLKFIGRYVVLQLEELKSSHNITITSIKDTTDDEDENDKL
XP_022965975.1 c-Myc-binding protein homolog [Cucurbita maxima]6.4e-3965.54Show/hide
Query:  ITEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKETFYTFGLTGDKVHKHSSGSS
        I EKEAKKEAFRKYLESNG+VDALTKVLVAL+EQNDKPSSALEFIQQRLGGPS+AEYE LQSEMADLQVKYDELLATHKET                   
Subjt:  ITEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKETFYTFGLTGDKVHKHSSGSS

Query:  VSFLYIENLLKFIGRYVVLQLEELKSSHNITITSIKDTTDDEDENDKL
                           +L  L+SSHN+T TSIKDTTDDE+ENDK+
Subjt:  VSFLYIENLLKFIGRYVVLQLEELKSSHNITITSIKDTTDDEDENDKL
TrEMBL top hitse value%identityAlignment
A0A1S3C377 c-Myc-binding protein homolog1.5e-4170.55Show/hide
Query:  EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKETFYTFGLTGDKVHKHSSGSSVS
        EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPS AEYE LQSEMADLQVKYDELLATHKET                     
Subjt:  EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKETFYTFGLTGDKVHKHSSGSSVS

Query:  FLYIENLLKFIGRYVVLQLEELKSSHNITITSIKDTTDDEDENDKL
                         +LEELKSSHNIT+TS KDTTDDEDENDKL
Subjt:  FLYIENLLKFIGRYVVLQLEELKSSHNITITSIKDTTDDEDENDKL
A0A5A7V8R5 c-Myc-binding protein-like protein1.5e-4170.55Show/hide
Query:  EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKETFYTFGLTGDKVHKHSSGSSVS
        EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPS AEYE LQSEMADLQVKYDELLATHKET                     
Subjt:  EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKETFYTFGLTGDKVHKHSSGSSVS

Query:  FLYIENLLKFIGRYVVLQLEELKSSHNITITSIKDTTDDEDENDKL
                         +LEELKSSHNIT+TS KDTTDDEDENDKL
Subjt:  FLYIENLLKFIGRYVVLQLEELKSSHNITITSIKDTTDDEDENDKL
A0A6J1CPJ0 c-Myc-binding protein homolog1.0e-3763.7Show/hide
Query:  EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKETFYTFGLTGDKVHKHSSGSSVS
        EKEAKKEAFRKYLESNG+VDA TKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYE LQSE+ADL+VKYDELL+THKET                     
Subjt:  EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKETFYTFGLTGDKVHKHSSGSSVS

Query:  FLYIENLLKFIGRYVVLQLEELKSSHNITITSIKDTTDDEDENDKL
                         +LEELKSSHN+ ++S +DTTD ED+NDKL
Subjt:  FLYIENLLKFIGRYVVLQLEELKSSHNITITSIKDTTDDEDENDKL
A0A6J1FDN0 c-Myc-binding protein homolog7.6e-3864.19Show/hide
Query:  ITEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKETFYTFGLTGDKVHKHSSGSS
        I EKEAKKEAFRKYLESNG+VDALTKVLVAL+EQ+DKPSSALEFIQQRLGGPS+AEYE LQSEMADLQVKYDELLATHKET                   
Subjt:  ITEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKETFYTFGLTGDKVHKHSSGSS

Query:  VSFLYIENLLKFIGRYVVLQLEELKSSHNITITSIKDTTDDEDENDKL
                           +LE LKS HN+T  S KDTTDDE+ENDK+
Subjt:  VSFLYIENLLKFIGRYVVLQLEELKSSHNITITSIKDTTDDEDENDKL
A0A6J1HQ97 c-Myc-binding protein homolog3.1e-3965.54Show/hide
Query:  ITEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKETFYTFGLTGDKVHKHSSGSS
        I EKEAKKEAFRKYLESNG+VDALTKVLVAL+EQNDKPSSALEFIQQRLGGPS+AEYE LQSEMADLQVKYDELLATHKET                   
Subjt:  ITEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKETFYTFGLTGDKVHKHSSGSS

Query:  VSFLYIENLLKFIGRYVVLQLEELKSSHNITITSIKDTTDDEDENDKL
                           +L  L+SSHN+T TSIKDTTDDE+ENDK+
Subjt:  VSFLYIENLLKFIGRYVVLQLEELKSSHNITITSIKDTTDDEDENDKL
SwissProt top hitse value%identityAlignment
Q2TBP7 c-Myc-binding protein3.7e-1346.15Show/hide
Query:  EAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGG--PSVAEYENLQSEMADLQVKYDELLATHKE
        ++K+E FR+YLE +G++D LTKVLVALYE+ +KP+SAL+F++  LG   P   E E L+ E+A+++ KY+ ++  +K+
Subjt:  EAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGG--PSVAEYENLQSEMADLQVKYDELLATHKE
Q54I57 c-Myc-binding protein homolog1.8e-1250Show/hide
Query:  EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDEL
        +  A+KE F+ YLE +G++DALTKVLV LYE++DKPS ALEFI++ LG     + + L+ E ADL+ +   L
Subjt:  EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDEL
Q5R7A8 c-Myc-binding protein3.7e-1346.15Show/hide
Query:  EAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGG--PSVAEYENLQSEMADLQVKYDELLATHKE
        ++K+E FR+YLE +G++D LTKVLVALYE+ +KP+SAL+F++  LG   P   E E L+ E+A+++ KY+ ++  +K+
Subjt:  EAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGG--PSVAEYENLQSEMADLQVKYDELLATHKE
Q99417 c-Myc-binding protein3.7e-1346.15Show/hide
Query:  EAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGG--PSVAEYENLQSEMADLQVKYDELLATHKE
        ++K+E FR+YLE +G++D LTKVLVALYE+ +KP+SAL+F++  LG   P   E E L+ E+A+++ KY+ ++  +K+
Subjt:  EAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGG--PSVAEYENLQSEMADLQVKYDELLATHKE
Q9EQS3 c-Myc-binding protein8.2e-1346.15Show/hide
Query:  EAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGG--PSVAEYENLQSEMADLQVKYDELLATHKE
        ++K+E FR+YLE +G++D LTKVLVALYE+ +KP+SAL+F++  LG   P   E E L+ E+A+++ KY+  +  +K+
Subjt:  EAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGG--PSVAEYENLQSEMADLQVKYDELLATHKE
Arabidopsis top hitse value%identityAlignment
AT2G14045.1 unknown protein1.2e-3078.48Show/hide
Query:  EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKET
        EKE KKEAFRKYLES+G++D+LTKVLV+LYEQNDKPSSALEFIQQ+LGGPSV++YE LQ+E +DLQ+KY+ELLA H+ET
Subjt:  EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKET
AT2G14045.2 unknown protein1.2e-3078.48Show/hide
Query:  EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKET
        EKE KKEAFRKYLES+G++D+LTKVLV+LYEQNDKPSSALEFIQQ+LGGPSV++YE LQ+E +DLQ+KY+ELLA H+ET
Subjt:  EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVKYDELLATHKET
AT2G14045.3 unknown protein1.1e-2579.41Show/hide
Query:  EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVK
        EKE KKEAFRKYLES+G++D+LTKVLV+LYEQNDKPSSALEFIQQ+LGGPSV++YE LQ+E +DLQ+K
Subjt:  EKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEYENLQSEMADLQVK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGGTGCTTTTATTTTTGTAGCCAATTTAAGACTCTCCTTCCTTTGTTATGGGATATCAGTGAAAAGTAGTATGAATAAGGAAATGAAACCATACATTTTAGGCAT
TTCCCAGCATATACAATCCAGTAATGTTTTGGGCTATGGTGAAGCTGAAACTCACCATCATGGGCCAAGGAAATCAATGGCAATCACTGAAAAAGAAGCGAAGAAGGAAG
CTTTTAGGAAGTATTTGGAGTCTAATGGCATTGTTGATGCTCTCACCAAAGTTCTGGTTGCATTGTATGAGCAAAATGACAAGCCTTCCTCTGCTCTCGAATTTATTCAA
CAAAGACTTGGAGGTCCATCTGTAGCTGAATATGAGAACTTACAATCCGAGATGGCAGATTTGCAAGTCAAGTATGATGAGCTTTTAGCTACACACAAAGAAACCTTTTA
TACTTTTGGGTTGACTGGTGACAAGGTACATAAACATAGTTCGGGTAGTTCTGTTAGTTTTCTGTACATTGAGAACCTCTTGAAATTCATTGGTCGATATGTTGTGCTGC
AGTTGGAAGAACTTAAAAGCTCGCATAATATCACTATAACATCGATTAAGGATACCACTGATGATGAGGATGAAAATGATAAGCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGGTGCTTTTATTTTTGTAGCCAATTTAAGACTCTCCTTCCTTTGTTATGGGATATCAGTGAAAAGTAGTATGAATAAGGAAATGAAACCATACATTTTAGGCAT
TTCCCAGCATATACAATCCAGTAATGTTTTGGGCTATGGTGAAGCTGAAACTCACCATCATGGGCCAAGGAAATCAATGGCAATCACTGAAAAAGAAGCGAAGAAGGAAG
CTTTTAGGAAGTATTTGGAGTCTAATGGCATTGTTGATGCTCTCACCAAAGTTCTGGTTGCATTGTATGAGCAAAATGACAAGCCTTCCTCTGCTCTCGAATTTATTCAA
CAAAGACTTGGAGGTCCATCTGTAGCTGAATATGAGAACTTACAATCCGAGATGGCAGATTTGCAAGTCAAGTATGATGAGCTTTTAGCTACACACAAAGAAACCTTTTA
TACTTTTGGGTTGACTGGTGACAAGGTACATAAACATAGTTCGGGTAGTTCTGTTAGTTTTCTGTACATTGAGAACCTCTTGAAATTCATTGGTCGATATGTTGTGCTGC
AGTTGGAAGAACTTAAAAGCTCGCATAATATCACTATAACATCGATTAAGGATACCACTGATGATGAGGATGAAAATGATAAGCTGTGA
Protein sequenceShow/hide protein sequence
MIGAFIFVANLRLSFLCYGISVKSSMNKEMKPYILGISQHIQSSNVLGYGEAETHHHGPRKSMAITEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQ
QRLGGPSVAEYENLQSEMADLQVKYDELLATHKETFYTFGLTGDKVHKHSSGSSVSFLYIENLLKFIGRYVVLQLEELKSSHNITITSIKDTTDDEDENDKL