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Lsi11G004200 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G004200
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPhosphoribosylaminoimidazole carboxylase atpase-subunit isoform 1
Genome locationchr11:4452978..4453238
RNA-Seq ExpressionLsi11G004200
SyntenyLsi11G004200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063581.1 hypothetical protein E6C27_scaffold329G00910 [Cucumis melo var. makuwa]1.5e-3185.71Show/hide
Query:  AAARFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDSSLSS
        +  R+ PG R+ IAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEV+DG   VHGGSSAFPGLNADGFAAASMVNQTQKQDSSLSS
Subjt:  AAARFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDSSLSS

KAG6586324.1 hypothetical protein SDJN03_19057, partial [Cucurbita argyrosperma subsp. sororia]9.6e-1865.52Show/hide
Query:  AAARFFPGPR---LSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVED--GPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDSSL
        +AAR   G R   +S  +LRG VP S RNPCSFIPG  RGRCTLSEVED  G     GGSSAFPG+N DGF+AA+MVN TQKQD SL
Subjt:  AAARFFPGPR---LSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVED--GPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDSSL

KAG6599331.1 hypothetical protein SDJN03_09109, partial [Cucurbita argyrosperma subsp. sororia]3.6e-2575.95Show/hide
Query:  RFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDSSL
        R+ P PR+ +A+LRG VPSSSRNPCSFIPGFSRGRCTLSE +DG   VHGGSSA  GLNADGFAAASM N+TQK+D SL
Subjt:  RFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDSSL

KGN60782.1 hypothetical protein Csa_019261 [Cucumis sativus]6.0e-2880.25Show/hide
Query:  RFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDSSLSS
        R+ PG  +  A+LRGPVPSSSRNPCSFIPGFSRGRCTLSEV++G   V GGSSAFPGLNADGFAAAS+VNQTQKQDSS+SS
Subjt:  RFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDSSLSS

XP_021888699.1 uncharacterized protein LOC110807772 [Carica papaya]1.7e-0651.47Show/hide
Query:  RGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAA---SMVNQTQKQDSS
        RGPVP S  NPC+FIPG +RGRCTLSE++         ++AFP +  D  A     S  N+TQKQDSS
Subjt:  RGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAA---SMVNQTQKQDSS

TrEMBL top hitse value%identityAlignment
A0A0A0LJ84 Uncharacterized protein2.9e-2880.25Show/hide
Query:  RFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDSSLSS
        R+ PG  +  A+LRGPVPSSSRNPCSFIPGFSRGRCTLSEV++G   V GGSSAFPGLNADGFAAAS+VNQTQKQDSS+SS
Subjt:  RFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDSSLSS

A0A5A7VCY2 Uncharacterized protein7.4e-3285.71Show/hide
Query:  AAARFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDSSLSS
        +  R+ PG R+ IAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEV+DG   VHGGSSAFPGLNADGFAAASMVNQTQKQDSSLSS
Subjt:  AAARFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDSSLSS

A0A5B6Z7Q1 Uncharacterized protein (Fragment)4.5e-0548.57Show/hide
Query:  RGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGG-----SSAFPGLNADGFAAASMVNQTQKQDSS
        RGPVPSS  NPC++IPG   GRCTL+E E      H        +AFP      FAAAS  N T+K+D+S
Subjt:  RGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGG-----SSAFPGLNADGFAAASMVNQTQKQDSS

A0A5B6Z868 Uncharacterized protein5.3e-0652.24Show/hide
Query:  RGPVPSSSRNPCSFIPGFSRGRCTLSEVE---DGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDS
        RGPVPSS  NPC++IPG   GRCTL+E E    G +  H    AFP    + FAAAS  N TQK+D+
Subjt:  RGPVPSSSRNPCSFIPGFSRGRCTLSEVE---DGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDS

A0A6A4KR04 Uncharacterized protein (Fragment)1.2e-0551.47Show/hide
Query:  RGPVPSSSRNPCSFIPGFSRGRCTLSEVE---DGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDSS
        RGPV  S  NPC++IPG  RGRCTL+E E    G V  H    AFPG+    FA AS  N ++KQD S
Subjt:  RGPVPSSSRNPCSFIPGFSRGRCTLSEVE---DGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGCCGCCGCTAGGTTCTTTCCGGGGCCGAGGCTTTCCATCGCGGTGCTGCGAGGTCCCGTGCCCAGTTCTAGTAGGAATCCGTGTTCCTTTATTCCGGGGTTTAG
TCGGGGCCGGTGTACGTTGAGCGAGGTGGAGGACGGTCCTGTCGATGTCCATGGTGGCTCCTCCGCCTTCCCTGGCCTGAATGCTGATGGGTTTGCTGCGGCTTCTATGG
TTAACCAAACCCAGAAGCAAGATTCTTCTTTGAGCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCGCCGCCGCTAGGTTCTTTCCGGGGCCGAGGCTTTCCATCGCGGTGCTGCGAGGTCCCGTGCCCAGTTCTAGTAGGAATCCGTGTTCCTTTATTCCGGGGTTTAG
TCGGGGCCGGTGTACGTTGAGCGAGGTGGAGGACGGTCCTGTCGATGTCCATGGTGGCTCCTCCGCCTTCCCTGGCCTGAATGCTGATGGGTTTGCTGCGGCTTCTATGG
TTAACCAAACCCAGAAGCAAGATTCTTCTTTGAGCTCTTGA
Protein sequenceShow/hide protein sequence
MSAAARFFPGPRLSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGPVDVHGGSSAFPGLNADGFAAASMVNQTQKQDSSLSS