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Lsi11G004390 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G004390
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPathogenesis-related protein PR-4-like
Genome locationchr11:4590735..4594128
RNA-Seq ExpressionLsi11G004390
SyntenyLsi11G004390
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063600.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa]9.7e-7088.65Show/hide
Query:  TKSLM-FVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVR
        T+S++ FVMLLCSCLVMMSKAQSGSN+RATFNLYNAPQINWDLN VSAFCSTWDA+KPLEWRSQYGWTAFCGP+GP GQDSCGLCL VTN++TG +ETVR
Subjt:  TKSLM-FVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVR

Query:  IVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC
        IVDQCSNGGLDLD+GVFQ+LDTDGNGNANGFLTVNYDFVNC
Subjt:  IVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC

KAG6599313.1 Wound-induced protein WIN1, partial [Cucurbita argyrosperma subsp. sororia]5.0e-6683.57Show/hide
Query:  TKSLMFVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRI
        TK LM + L C CLVM+SKAQS SN+RATFNLYNAP+INWD N VSAFCSTWDAD+PLEWRSQYGWTAFCGPVGPQG+DSCGLCL VTN ETGA++TVRI
Subjt:  TKSLMFVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRI

Query:  VDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC
        VDQC+NGGLDLD+GVF++LDTDGNGNANGFLTV+YDFVNC
Subjt:  VDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC

XP_004139240.1 pathogenesis-related protein PR-4 [Cucumis sativus]1.0e-6687.14Show/hide
Query:  KSLM-FVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRI
        KSL+ FVMLLCSCLVMMSKAQSGSN+RATFNLYNAPQINWDLN VSAFCSTWDA++PLEWRSQYGWTAFCGP+GP GQ SCGLCL VTN++TGA++TVRI
Subjt:  KSLM-FVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRI

Query:  VDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC
        VDQCSNGGLDLD+GVFQ+LDTDGNG ANGFLT+NYDFVNC
Subjt:  VDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC

XP_022946139.1 pathogenesis-related protein PR-4-like [Cucurbita moschata]6.5e-6684.29Show/hide
Query:  TKSLMFVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRI
        TK LM + L C CLVM+SKAQS SN+RATFNLYNAP+INWDLN VSAFCSTWDAD+PLEWRSQYGWTAFCGPVGPQG+DSCGLCL VTN ETGA++ VRI
Subjt:  TKSLMFVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRI

Query:  VDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC
        VDQC+NGGLDLD+GVFQ+LDTDGNGNANGFLTV+YDFVNC
Subjt:  VDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC

XP_022999104.1 pathogenesis-related protein PR-4-like [Cucurbita maxima]6.5e-6684.29Show/hide
Query:  TKSLMFVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRI
        TK LM + L C CLVM+SKAQS SN+RATFNLYNAP+INWDLN VSAFCSTWDAD+PLEWRSQYGWTAFCGPVGPQGQDSCGLCL VTN ETGA++TVRI
Subjt:  TKSLMFVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRI

Query:  VDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC
        VDQC+NGGLDLD+GVFQ+LDTDGNGNANGFL V+YDFV C
Subjt:  VDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LG74 Barwin domain-containing protein6.8e-6187.1Show/hide
Query:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF
        MSKAQSGSN+RATFNLYNAPQINWDLN VSAFCSTWDA++PLEWRSQYGWTAFCGP+GP GQ SCGLCL VTN++TGA++TVRIVDQCSNGGLDLD+GVF
Subjt:  MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVF

Query:  QNLDTDGNGNANGFLTVNYDFVNC
        Q+LDTDGNG ANGFLT+NYDFVNC
Subjt:  QNLDTDGNGNANGFLTVNYDFVNC

A0A5D3D4F5 Pathogenesis-related protein PR-4-like4.7e-7088.65Show/hide
Query:  TKSLM-FVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVR
        T+S++ FVMLLCSCLVMMSKAQSGSN+RATFNLYNAPQINWDLN VSAFCSTWDA+KPLEWRSQYGWTAFCGP+GP GQDSCGLCL VTN++TG +ETVR
Subjt:  TKSLM-FVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVR

Query:  IVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC
        IVDQCSNGGLDLD+GVFQ+LDTDGNGNANGFLTVNYDFVNC
Subjt:  IVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC

A0A6J1CMK0 pathogenesis-related protein PR-4-like2.1e-6280.42Show/hide
Query:  TKSL--MFVMLLCSCLVM-MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARET
        TKSL  + +++LC CLV+ +S+ QSGSN+RAT+NLYNAPQINWDLN VSAFC+TWDA++PLEWRSQYGWTAFCGPVGP GQDSCG CL VTN ETGA++T
Subjt:  TKSL--MFVMLLCSCLVM-MSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARET

Query:  VRIVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC
        VRIVDQCSNGGLDLD+GVFQ+LDT+GNGNANGFLTVNYDFVNC
Subjt:  VRIVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC

A0A6J1G2Y5 pathogenesis-related protein PR-4-like3.1e-6684.29Show/hide
Query:  TKSLMFVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRI
        TK LM + L C CLVM+SKAQS SN+RATFNLYNAP+INWDLN VSAFCSTWDAD+PLEWRSQYGWTAFCGPVGPQG+DSCGLCL VTN ETGA++ VRI
Subjt:  TKSLMFVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRI

Query:  VDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC
        VDQC+NGGLDLD+GVFQ+LDTDGNGNANGFLTV+YDFVNC
Subjt:  VDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC

A0A6J1KG47 pathogenesis-related protein PR-4-like3.1e-6684.29Show/hide
Query:  TKSLMFVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRI
        TK LM + L C CLVM+SKAQS SN+RATFNLYNAP+INWDLN VSAFCSTWDAD+PLEWRSQYGWTAFCGPVGPQGQDSCGLCL VTN ETGA++TVRI
Subjt:  TKSLMFVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRI

Query:  VDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC
        VDQC+NGGLDLD+GVFQ+LDTDGNGNANGFL V+YDFV C
Subjt:  VDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN12.6e-4969.75Show/hide
Query:  SGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDT
        S  N+RAT+++YN   + WDLN VSA+CSTWDA+KPL WR +YGWTAFCGPVGP+G+DSCG CL VTN  TGA+ TVRIVDQCSNGGLDLD+ VF+ +DT
Subjt:  SGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDT

Query:  DGNGNANGFLTVNYDFVNC
        DGNGN  G L VNY FV+C
Subjt:  DGNGNANGFLTVNYDFVNC

P09762 Wound-induced protein WIN22.6e-4971.43Show/hide
Query:  SGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDT
        S  N+RAT+++YN   + WDLN VSA+CSTWDA+KP  WRS+YGWTAFCGPVGP+G+DSCG CL VTN  TGA+ TVRIVDQCSNGGLDLDI VFQ +DT
Subjt:  SGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDT

Query:  DGNGNANGFLTVNYDFVNC
        DG GN  G L VNY FVNC
Subjt:  DGNGNANGFLTVNYDFVNC

P29062 Pathogenesis-related protein PR-4A8.0e-5163.83Show/hide
Query:  NTKSLMFVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVR
        N   L   +L+ S ++ M+ AQS +N+R+T++LYN   INWDL   SAFC+TWDADKPL WR +YGWTAFCGP GP+GQDSCG CL VTN  TG + TVR
Subjt:  NTKSLMFVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVR

Query:  IVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC
        IVDQCSNGGLDLD+ VF  LDT+G G   G LTVNY+FVNC
Subjt:  IVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC

P29063 Pathogenesis-related protein PR-4B3.0e-5063.12Show/hide
Query:  NTKSLMFVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVR
        N   L   +L+ S ++ M+ AQS +N+R+T++LYN   INWDL   SAFC+TWDADKPL WR +YGWTAFCGP GP+GQDSCG CL VTN  TG + TVR
Subjt:  NTKSLMFVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVR

Query:  IVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC
        IVDQCSNGGLDLD+ VF  LDT+G G   G L VNY+FVNC
Subjt:  IVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC

P32045 Pathogenesis-related protein P25.4e-4761.31Show/hide
Query:  LMFVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQ
        L     + + ++ ++ AQS +N+RAT++LYN   INWDL   S +C+TWDADKPLEWR +YGWTAFCGP GP GQ SCG CL VTN  TG +ETVRIVDQ
Subjt:  LMFVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQ

Query:  CSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC
        C NGGLDLD+ VF  LDT+G G   G L VNY+FVNC
Subjt:  CSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 41.4e-4565.83Show/hide
Query:  QSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLD
        +S SN+RAT++ YN  Q NWDL  VSA+CSTWDADKP  WRS+YGWTAFCGP GP+GQ SCG CL V N  T A  TVRIVDQCSNGGLDLD+ +F  +D
Subjt:  QSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQDSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLD

Query:  TDGNGNANGFLTVNYDFVNC
        TDG G   G L V+Y FV+C
Subjt:  TDGNGNANGFLTVNYDFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGTCAGAAATTACTAAGAATAATATATCGAAGTAAGTTTAGGTCGGCAATCTACACGTCCGAATTCAATCTTATCGACATTTTTATTTTTTCAAACACAAAAAGTTTGAT
GTTTGTAATGTTGTTGTGTTCATGTCTTGTAATGATGTCCAAAGCTCAAAGTGGGAGCAATATTAGAGCAACATTTAACTTATACAATGCCCCACAAATCAATTGGGATT
TGAATGTTGTGAGTGCATTTTGTTCAACATGGGATGCTGATAAGCCTTTGGAATGGCGTAGCCAATATGGATGGACTGCCTTTTGTGGCCCTGTTGGACCTCAAGGCCAA
GACTCTTGTGGCCTATGTTTATCGGTGACGAATATTGAAACAGGCGCTCGAGAAACCGTTAGAATTGTAGATCAATGTAGTAATGGAGGCCTAGATTTGGACATTGGGGT
GTTTCAAAATCTCGATACCGATGGAAATGGCAATGCTAATGGCTTTCTCACAGTCAACTATGATTTTGTTAATTGTTGA
mRNA sequenceShow/hide mRNA sequence
TGTCAGAAATTACTAAGAATAATATATCGAAGTAAGTTTAGGTCGGCAATCTACACGTCCGAATTCAATCTTATCGACATTTTTATTTTTTCAAACACAAAAAGTTTGAT
GTTTGTAATGTTGTTGTGTTCATGTCTTGTAATGATGTCCAAAGCTCAAAGTGGGAGCAATATTAGAGCAACATTTAACTTATACAATGCCCCACAAATCAATTGGGATT
TGAATGTTGTGAGTGCATTTTGTTCAACATGGGATGCTGATAAGCCTTTGGAATGGCGTAGCCAATATGGATGGACTGCCTTTTGTGGCCCTGTTGGACCTCAAGGCCAA
GACTCTTGTGGCCTATGTTTATCGGTGACGAATATTGAAACAGGCGCTCGAGAAACCGTTAGAATTGTAGATCAATGTAGTAATGGAGGCCTAGATTTGGACATTGGGGT
GTTTCAAAATCTCGATACCGATGGAAATGGCAATGCTAATGGCTTTCTCACAGTCAACTATGATTTTGTTAATTGTTGA
Protein sequenceShow/hide protein sequence
CQKLLRIIYRSKFRSAIYTSEFNLIDIFIFSNTKSLMFVMLLCSCLVMMSKAQSGSNIRATFNLYNAPQINWDLNVVSAFCSTWDADKPLEWRSQYGWTAFCGPVGPQGQ
DSCGLCLSVTNIETGARETVRIVDQCSNGGLDLDIGVFQNLDTDGNGNANGFLTVNYDFVNC