; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G004400 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G004400
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionpathogenesis-related protein PR-4-like
Genome locationchr11:4602177..4603027
RNA-Seq ExpressionLsi11G004400
SyntenyLsi11G004400
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139239.1 pathogenesis-related protein PR-4 [Cucumis sativus]2.9e-7292.25Show/hide
Query:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        M +GSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASV+CATWDA+KPLEWRR+YGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC
        RIVDQC+NGGLDLDVNVFR+IDTNGNGN+RGHL VNYQFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC

XP_008456018.1 PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo]1.4e-7495.07Show/hide
Query:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+GSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASV+CATWDANKPLEWRRRYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC
        RIVDQC+NGGLDLDVNVFR+IDTNGNGN RGHLTVNYQFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC

XP_022946136.1 pathogenesis-related protein PR-4-like [Cucurbita moschata]1.6e-7090.14Show/hide
Query:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+ SI+MIL LALGVLSLANAQSA NVRATYHLYNPQDINWDYLRASV+CATWDANKP+EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC
        RIVDQC+NGGLDLDVNVF++IDTNGNG  RGHL VNYQFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC

XP_022999102.1 pathogenesis-related protein PR-4-like [Cucurbita maxima]5.5e-7189.44Show/hide
Query:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+GS +MIL LALG+LSLANAQSA NVRATYHLYNPQDINWDYLRASV+CATWDANKP+EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC
        RIVDQC+NGGLDLDVNVF++IDTNGNG  RGHL VNYQFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC

XP_038890575.1 pathogenesis-related protein PR-4-like [Benincasa hispida]9.1e-7493.66Show/hide
Query:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+GSIMMILVLALGVLS+ANAQSA NVRATYHLYNPQ+INWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGAS IV
Subjt:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC
        RIVDQCSNGGLDLDVNVF+++DTNGNGN RGHLTVNYQFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LIC8 Barwin domain-containing protein1.4e-7292.25Show/hide
Query:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        M +GSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASV+CATWDA+KPLEWRR+YGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC
        RIVDQC+NGGLDLDVNVFR+IDTNGNGN+RGHL VNYQFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC

A0A1S3C3H6 pathogenesis-related protein PR-4-like6.8e-7595.07Show/hide
Query:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+GSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASV+CATWDANKPLEWRRRYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC
        RIVDQC+NGGLDLDVNVFR+IDTNGNGN RGHLTVNYQFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC

A0A5D3D4G8 Pathogenesis-related protein PR-4-like6.8e-7595.07Show/hide
Query:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+GSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASV+CATWDANKPLEWRRRYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC
        RIVDQC+NGGLDLDVNVFR+IDTNGNGN RGHLTVNYQFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC

A0A6J1G2U1 pathogenesis-related protein PR-4-like7.8e-7190.14Show/hide
Query:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+ SI+MIL LALGVLSLANAQSA NVRATYHLYNPQDINWDYLRASV+CATWDANKP+EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC
        RIVDQC+NGGLDLDVNVF++IDTNGNG  RGHL VNYQFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC

A0A6J1K9X1 pathogenesis-related protein PR-4-like2.7e-7189.44Show/hide
Query:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+GS +MIL LALG+LSLANAQSA NVRATYHLYNPQDINWDYLRASV+CATWDANKP+EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC
        RIVDQC+NGGLDLDVNVF++IDTNGNG  RGHL VNYQFVNC
Subjt:  RIVDQCSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN11.3e-5477.31Show/hide
Query:  SATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCSNGGLDLDVNVFRKIDT
        SA NVRATYH+YNPQ++ WD    S YC+TWDANKPL WR++YGWTAFCGPVGPRG+ SCG+CLRVTNT TGA   VRIVDQCSNGGLDLDVNVFR+IDT
Subjt:  SATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCSNGGLDLDVNVFRKIDT

Query:  NGNGNMRGHLTVNYQFVNC
        +GNGN +GHL VNYQFV+C
Subjt:  NGNGNMRGHLTVNYQFVNC

P09762 Wound-induced protein WIN29.2e-5374.79Show/hide
Query:  SATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCSNGGLDLDVNVFRKIDT
        SA NVRATYH+YNPQ++ WD    S YC+TWDANKP  WR +YGWTAFCGPVGPRG+ SCG+CLRVTNT TGA   VRIVDQCSNGGLDLD+NVF++IDT
Subjt:  SATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCSNGGLDLDVNVFRKIDT

Query:  NGNGNMRGHLTVNYQFVNC
        +G GN +GHL VNYQFVNC
Subjt:  NGNGNMRGHLTVNYQFVNC

P29062 Pathogenesis-related protein PR-4A5.2e-5671.53Show/hide
Query:  IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQ
        + + L++   V+++A AQSATNVR+TYHLYNPQ+INWD   AS +CATWDA+KPL WR++YGWTAFCGP GPRGQ SCGRCLRVTNT TG    VRIVDQ
Subjt:  IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQ

Query:  CSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC
        CSNGGLDLDVNVF ++DTNG G  +GHLTVNY+FVNC
Subjt:  CSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC

P29063 Pathogenesis-related protein PR-4B5.8e-5570.07Show/hide
Query:  IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQ
        + + L++   ++++A AQSATNVR+TYHLYNPQ+INWD   AS +CATWDA+KPL WR++YGWTAFCGP GPRGQ SCGRCLRVTNT TG    VRIVDQ
Subjt:  IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQ

Query:  CSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC
        CSNGGLDLDVNVF ++DTNG G  +GHL VNY+FVNC
Subjt:  CSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC

P32045 Pathogenesis-related protein P29.5e-5872.73Show/hide
Query:  MERGSIMMILVLALG-VLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEI
        MER + + +    +  ++++A AQSATNVRATYHLYNPQ+INWD   ASVYCATWDA+KPLEWRRRYGWTAFCGP GP GQASCGRCLRVTNT TG  E 
Subjt:  MERGSIMMILVLALG-VLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEI

Query:  VRIVDQCSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC
        VRIVDQC NGGLDLDVNVF ++DTNG G  RG+L VNY+FVNC
Subjt:  VRIVDQCSNGGLDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 48.3e-4969.17Show/hide
Query:  QSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCSNGGLDLDVNVFRKID
        +SA+NVRATYH YNP   NWD    S YC+TWDA+KP  WR +YGWTAFCGP GPRGQASCG+CLRV NT T A+  VRIVDQCSNGGLDLDV +F +ID
Subjt:  QSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCSNGGLDLDVNVFRKID

Query:  TNGNGNMRGHLTVNYQFVNC
        T+G G  +GHL V+YQFV+C
Subjt:  TNGNGNMRGHLTVNYQFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGGAAGTATTATGATGATTTTGGTGTTGGCTTTGGGAGTTTTGAGCTTGGCAAATGCTCAAAGTGCCACAAATGTGAGAGCTACTTATCATTTATACAACCC
ACAAGACATCAATTGGGACTACCTTAGAGCAAGTGTTTATTGTGCAACATGGGATGCTAACAAGCCTTTGGAGTGGCGTCGTCGGTACGGTTGGACCGCCTTCTGTGGCC
CTGTCGGCCCTCGTGGCCAAGCTTCTTGTGGACGTTGTTTGAGGGTGACTAACACTGAAACGGGAGCTTCAGAAATAGTAAGGATTGTTGATCAATGCTCCAATGGAGGG
TTGGATTTGGATGTGAATGTGTTTAGGAAGATCGATACTAATGGAAATGGAAACATGCGAGGCCATCTTACTGTCAACTATCAGTTTGTCAATTGCTAA
mRNA sequenceShow/hide mRNA sequence
GAAAAAAGAAAAGATTTGAGTTGAAAAGTATGCACTCATATTCTTCTATAAATTAAAGCACTCTCCCAATGAATCATTAAACTACAAACATTTATAAGTGTGAGAGAGTT
ATTAGAGAGAATTAAGAAAGCAAAGAATGGAGAGAGGAAGTATTATGATGATTTTGGTGTTGGCTTTGGGAGTTTTGAGCTTGGCAAATGCTCAAAGTGCCACAAATGTG
AGAGCTACTTATCATTTATACAACCCACAAGACATCAATTGGGACTACCTTAGAGCAAGTGTTTATTGTGCAACATGGGATGCTAACAAGCCTTTGGAGTGGCGTCGTCG
GTACGGTTGGACCGCCTTCTGTGGCCCTGTCGGCCCTCGTGGCCAAGCTTCTTGTGGACGTTGTTTGAGGGTGACTAACACTGAAACGGGAGCTTCAGAAATAGTAAGGA
TTGTTGATCAATGCTCCAATGGAGGGTTGGATTTGGATGTGAATGTGTTTAGGAAGATCGATACTAATGGAAATGGAAACATGCGAGGCCATCTTACTGTCAACTATCAG
TTTGTCAATTGCTAAGATTTCTACTTTAATTTCATTTCATTCTTCTTAGAAGGAGAAAGAAAATCATGTTCTAATGAATAAAGTATGAATAATAAAAGTATAAAATAAAG
GTTCCTTTTGGGTTGTATTTGTAAA
Protein sequenceShow/hide protein sequence
MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLRASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCSNGG
LDLDVNVFRKIDTNGNGNMRGHLTVNYQFVNC