; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G004410 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G004410
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionpathogenesis-related protein PR-4-like
Genome locationchr11:4609108..4610064
RNA-Seq ExpressionLsi11G004410
SyntenyLsi11G004410
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139239.1 pathogenesis-related protein PR-4 [Cucumis sativus]2.9e-7292.25Show/hide
Query:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        M +GSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYL+ASV+CATWDA+KPLEWRR+YGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        RIVDQC+NGGLDLDVNVFRRIDTNGNGN RGHLIVNY+FVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

XP_008456018.1 PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo]3.1e-7494.37Show/hide
Query:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+GSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYL+ASV+CATWDANKPLEWRRRYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        RIVDQC+NGGLDLDVNVFRRIDTNGNGNFRGHL VNY+FVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

XP_022946136.1 pathogenesis-related protein PR-4-like [Cucurbita moschata]1.9e-7190.85Show/hide
Query:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+ SI+MIL LALGVLSLANAQSA NVRATYHLYNPQDINWDYL+ASV+CATWDANKP+EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        RIVDQC+NGGLDLDVNVF+RIDTNGNG FRGHLIVNY+FVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

XP_022999102.1 pathogenesis-related protein PR-4-like [Cucurbita maxima]6.5e-7290.14Show/hide
Query:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+GS +MIL LALG+LSLANAQSA NVRATYHLYNPQDINWDYL+ASV+CATWDANKP+EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        RIVDQC+NGGLDLDVNVF+RIDTNGNG FRGHLIVNY+FVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

XP_038890575.1 pathogenesis-related protein PR-4-like [Benincasa hispida]4.5e-7392.25Show/hide
Query:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+GSIMMILVLALGVLS+ANAQSA NVRATYHLYNPQ+INWDYL+ASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGAS IV
Subjt:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        RIVDQCSNGGLDLDVNVF+++DTNGNGNFRGHL VNY+FVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LIC8 Barwin domain-containing protein1.4e-7292.25Show/hide
Query:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        M +GSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYL+ASV+CATWDA+KPLEWRR+YGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        RIVDQC+NGGLDLDVNVFRRIDTNGNGN RGHLIVNY+FVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

A0A1S3C3H6 pathogenesis-related protein PR-4-like1.5e-7494.37Show/hide
Query:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+GSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYL+ASV+CATWDANKPLEWRRRYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        RIVDQC+NGGLDLDVNVFRRIDTNGNGNFRGHL VNY+FVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

A0A5D3D4G8 Pathogenesis-related protein PR-4-like1.5e-7494.37Show/hide
Query:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+GSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYL+ASV+CATWDANKPLEWRRRYGWTAFCGPVGPRG+ SCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        RIVDQC+NGGLDLDVNVFRRIDTNGNGNFRGHL VNY+FVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

A0A6J1G2U1 pathogenesis-related protein PR-4-like9.2e-7290.85Show/hide
Query:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+ SI+MIL LALGVLSLANAQSA NVRATYHLYNPQDINWDYL+ASV+CATWDANKP+EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        RIVDQC+NGGLDLDVNVF+RIDTNGNG FRGHLIVNY+FVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

A0A6J1K9X1 pathogenesis-related protein PR-4-like3.2e-7290.14Show/hide
Query:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
        ME+GS +MIL LALG+LSLANAQSA NVRATYHLYNPQDINWDYL+ASV+CATWDANKP+EWRR+YGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV
Subjt:  MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIV

Query:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        RIVDQC+NGGLDLDVNVF+RIDTNGNG FRGHLIVNY+FVNC
Subjt:  RIVDQCSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN15.8e-5577.31Show/hide
Query:  SATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCSNGGLDLDVNVFRRIDT
        SA NVRATYH+YNPQ++ WD    S YC+TWDANKPL WR++YGWTAFCGPVGPRG+ SCG+CLRVTNT TGA   VRIVDQCSNGGLDLDVNVFR+IDT
Subjt:  SATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCSNGGLDLDVNVFRRIDT

Query:  NGNGNFRGHLIVNYEFVNC
        +GNGN +GHLIVNY+FV+C
Subjt:  NGNGNFRGHLIVNYEFVNC

P09762 Wound-induced protein WIN21.2e-5274.79Show/hide
Query:  SATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCSNGGLDLDVNVFRRIDT
        SA NVRATYH+YNPQ++ WD    S YC+TWDANKP  WR +YGWTAFCGPVGPRG+ SCG+CLRVTNT TGA   VRIVDQCSNGGLDLD+NVF++IDT
Subjt:  SATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCSNGGLDLDVNVFRRIDT

Query:  NGNGNFRGHLIVNYEFVNC
        +G GN +GHLIVNY+FVNC
Subjt:  NGNGNFRGHLIVNYEFVNC

P29062 Pathogenesis-related protein PR-4A2.6e-5571.53Show/hide
Query:  IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQ
        + + L++   V+++A AQSATNVR+TYHLYNPQ+INWD   AS +CATWDA+KPL WR++YGWTAFCGP GPRGQ SCGRCLRVTNT TG    VRIVDQ
Subjt:  IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQ

Query:  CSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        CSNGGLDLDVNVF ++DTNG G  +GHL VNYEFVNC
Subjt:  CSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

P29063 Pathogenesis-related protein PR-4B1.5e-5571.53Show/hide
Query:  IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQ
        + + L++   ++++A AQSATNVR+TYHLYNPQ+INWD   AS +CATWDA+KPL WR++YGWTAFCGP GPRGQ SCGRCLRVTNT TG    VRIVDQ
Subjt:  IMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQ

Query:  CSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        CSNGGLDLDVNVF ++DTNG G  +GHLIVNYEFVNC
Subjt:  CSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

P32045 Pathogenesis-related protein P29.5e-5874.13Show/hide
Query:  MERGSIMMILVLALG-VLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEI
        MER + + +    +  ++++A AQSATNVRATYHLYNPQ+INWD   ASVYCATWDA+KPLEWRRRYGWTAFCGP GP GQASCGRCLRVTNT TG  E 
Subjt:  MERGSIMMILVLALG-VLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEI

Query:  VRIVDQCSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC
        VRIVDQC NGGLDLDVNVF R+DTNG G  RG+L VNYEFVNC
Subjt:  VRIVDQCSNGGLDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 48.3e-4969.17Show/hide
Query:  QSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCSNGGLDLDVNVFRRID
        +SA+NVRATYH YNP   NWD    S YC+TWDA+KP  WR +YGWTAFCGP GPRGQASCG+CLRV NT T A+  VRIVDQCSNGGLDLDV +F +ID
Subjt:  QSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCSNGGLDLDVNVFRRID

Query:  TNGNGNFRGHLIVNYEFVNC
        T+G G  +GHLIV+Y+FV+C
Subjt:  TNGNGNFRGHLIVNYEFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGGAAGTATTATGATGATTTTGGTGTTGGCTTTGGGAGTTTTGAGCTTGGCAAATGCTCAAAGTGCCACAAATGTGAGAGCTACTTATCATTTATACAACCC
ACAAGACATCAATTGGGACTACCTTAAAGCAAGTGTTTATTGTGCCACATGGGATGCTAATAAGCCTTTGGAGTGGCGTCGTCGATACGGTTGGACCGCCTTCTGTGGCC
CTGTCGGCCCTCGTGGCCAAGCTTCTTGTGGACGTTGTTTGAGGGTGACTAACACTGAAACGGGAGCTTCAGAAATAGTAAGGATTGTTGATCAATGCTCCAATGGAGGG
TTGGATTTGGATGTGAATGTGTTTAGGAGGATTGACACTAATGGAAACGGAAACTTCCGAGGCCATCTTATTGTCAACTATGAGTTCGTCAATTGCTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAGAAAAGATTTGAGTTGAAAAGTATGCACTCATATTCTTCTATAAATTAAAGCACTCTCCCAATGAATCATTAAACTACAAACATTTATAAGTGTGAGAGAGTTA
TTAGAGAGAATTAAGAAAGCAAAGAATGGAGAGAGGAAGTATTATGATGATTTTGGTGTTGGCTTTGGGAGTTTTGAGCTTGGCAAATGCTCAAAGTGCCACAAATGTGA
GAGCTACTTATCATTTATACAACCCACAAGACATCAATTGGGACTACCTTAAAGCAAGTGTTTATTGTGCCACATGGGATGCTAATAAGCCTTTGGAGTGGCGTCGTCGA
TACGGTTGGACCGCCTTCTGTGGCCCTGTCGGCCCTCGTGGCCAAGCTTCTTGTGGACGTTGTTTGAGGGTGACTAACACTGAAACGGGAGCTTCAGAAATAGTAAGGAT
TGTTGATCAATGCTCCAATGGAGGGTTGGATTTGGATGTGAATGTGTTTAGGAGGATTGACACTAATGGAAACGGAAACTTCCGAGGCCATCTTATTGTCAACTATGAGT
TCGTCAATTGCTAAGATTTCTACTTTAATTTTATTTCATTCTTCCTAGAAGAAGAAAGGAAATCATGTTCTATGAATAAAGTATGAATAATAAAAAGTATGAAATAAATG
TTTCTTTAGTTTATGAGCTTGGTTGAGGAAATAAAATGGGATGGGTTTGAGTTGTAATATAATCCAAAACCCATGTTTGAATTGAGCTTTTTAGACTTGATTTATAATAT
TAAACTCATTCTGTTCAAA
Protein sequenceShow/hide protein sequence
MERGSIMMILVLALGVLSLANAQSATNVRATYHLYNPQDINWDYLKASVYCATWDANKPLEWRRRYGWTAFCGPVGPRGQASCGRCLRVTNTETGASEIVRIVDQCSNGG
LDLDVNVFRRIDTNGNGNFRGHLIVNYEFVNC