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Lsi11G004600 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G004600
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNeurogenic locus notch-like protein
Genome locationchr11:4795011..4800681
RNA-Seq ExpressionLsi11G004600
SyntenyLsi11G004600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139226.1 uncharacterized protein LOC101221137 [Cucumis sativus]3.7e-5965.36Show/hide
Query:  DKICEEVNCGKGNCTADASY-PFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVPNNSSFF----------------------
        DK+CEEVNCGKGNCT    + PFGF C+CD GWKRTR+NDDDL FLPCVIPNC+L+YGCQPAPPPVPEKPVP NSSFF                      
Subjt:  DKICEEVNCGKGNCTADASY-PFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVPNNSSFF----------------------

Query:  --------------------DRTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSILPGKFQWVAIAILFAMAMELWN
                            D TIGSDCAKLGIKVANVN T NGSGSGNGTG GNSILPGKFQWVA+AILFAMAMELWN
Subjt:  --------------------DRTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSILPGKFQWVAIAILFAMAMELWN

XP_022143152.1 uncharacterized protein LOC111013088 [Momordica charantia]9.7e-6065.56Show/hide
Query:  FTDKICEEVNCGKGNCTADASYPFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVPNNSSFFDR-------------------
        F +K+CEEVNCGKGNCTADA YPFGFIC CDSGWKRTR+NDDDLTFLPCVIPNCSLNYGCQPAPPPVP+K VP NSSFFD                    
Subjt:  FTDKICEEVNCGKGNCTADASYPFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVPNNSSFFDR-------------------

Query:  -----------------------TIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSILPGKFQWVAIAILFAMAMELWN
                               TIGSDCAKLGIKVANVN+TGN  G+G GTGQGNSI+PGKFQ VA+AI+F+MAMELWN
Subjt:  -----------------------TIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSILPGKFQWVAIAILFAMAMELWN

XP_022937685.1 uncharacterized protein LOC111444015 [Cucurbita moschata]3.2e-5562.78Show/hide
Query:  FTDKICEEVNCGKGNCTADASYPFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVPNNSSFF---------------------
        F DKIC+EVNCGKGNCT D  YPF F C+CDSGWKRTR++DDDLTFLPCVIPNCSL+YGCQ APPPVP+KPVP NSSFF                     
Subjt:  FTDKICEEVNCGKGNCTADASYPFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVPNNSSFF---------------------

Query:  ---------------------DRTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSILPGKFQWVAIAILFAMAMELWN
                             D TIGSDCAKLGIKVANVN++ NGSG G+GTGQGNS+LPGKF WVA+AILF M MELWN
Subjt:  ---------------------DRTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSILPGKFQWVAIAILFAMAMELWN

XP_023521139.1 uncharacterized protein LOC111784759 [Cucurbita pepo subsp. pepo]3.2e-5562.78Show/hide
Query:  FTDKICEEVNCGKGNCTADASYPFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVPNNSSFF---------------------
        F DKIC+EVNCGKGNCT D  YPF F C+CDSGWKRTR++DDDLTFLPCVIPNCSL+YGCQ APPPVP+KPVP NSSFF                     
Subjt:  FTDKICEEVNCGKGNCTADASYPFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVPNNSSFF---------------------

Query:  ---------------------DRTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSILPGKFQWVAIAILFAMAMELWN
                             D TIGSDCAKLGIKVANVN++ NGSG G+GTGQGNS+LPGKF WVA+AILF M MELWN
Subjt:  ---------------------DRTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSILPGKFQWVAIAILFAMAMELWN

XP_038891234.1 uncharacterized protein LOC120080588 [Benincasa hispida]1.1e-5867.42Show/hide
Query:  FTDKICEEVNCGKGNCTADASYPFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVPNNSSFF---------------------
        F DKICEEVNCGKGNCTADA YPFGF C+C+SGWKRTRE+DDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVPNNSSFF                     
Subjt:  FTDKICEEVNCGKGNCTADASYPFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVPNNSSFF---------------------

Query:  ---------------------DRTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSILPGKFQWVAIAILFAMAMEL
                             D TIGSDCAKLGIKVANVN+T NGSG   GTGQGNSILP K  WVAIAILFAM+MEL
Subjt:  ---------------------DRTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSILPGKFQWVAIAILFAMAMEL

TrEMBL top hitse value%identityAlignment
A0A0A0LLE2 Uncharacterized protein1.8e-5965.36Show/hide
Query:  DKICEEVNCGKGNCTADASY-PFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVPNNSSFF----------------------
        DK+CEEVNCGKGNCT    + PFGF C+CD GWKRTR+NDDDL FLPCVIPNC+L+YGCQPAPPPVPEKPVP NSSFF                      
Subjt:  DKICEEVNCGKGNCTADASY-PFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVPNNSSFF----------------------

Query:  --------------------DRTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSILPGKFQWVAIAILFAMAMELWN
                            D TIGSDCAKLGIKVANVN T NGSGSGNGTG GNSILPGKFQWVA+AILFAMAMELWN
Subjt:  --------------------DRTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSILPGKFQWVAIAILFAMAMELWN

A0A5A7VDL6 MtN261.6e-4460.38Show/hide
Query:  FFTDKICEEVNCGKGNCTADASY-PFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVPNNSSFF-------------------
        F  DK+CEEVNCGKGNCT    + PFGF C+CD GWKRTR+NDDDL FLPCVIPNC+LNYGCQPAPPPVPEKPVP NSSFF                   
Subjt:  FFTDKICEEVNCGKGNCTADASY-PFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVPNNSSFF-------------------

Query:  -----------------------DRTIGSDCAKLGIKVANVNAT-GNGSGSGNGTGQGN
                               D TIGSDCAKLGIKVANVN T  NGSGSGNGTG GN
Subjt:  -----------------------DRTIGSDCAKLGIKVANVNAT-GNGSGSGNGTGQGN

A0A6J1CPY4 uncharacterized protein LOC1110130884.7e-6065.56Show/hide
Query:  FTDKICEEVNCGKGNCTADASYPFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVPNNSSFFDR-------------------
        F +K+CEEVNCGKGNCTADA YPFGFIC CDSGWKRTR+NDDDLTFLPCVIPNCSLNYGCQPAPPPVP+K VP NSSFFD                    
Subjt:  FTDKICEEVNCGKGNCTADASYPFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVPNNSSFFDR-------------------

Query:  -----------------------TIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSILPGKFQWVAIAILFAMAMELWN
                               TIGSDCAKLGIKVANVN+TGN  G+G GTGQGNSI+PGKFQ VA+AI+F+MAMELWN
Subjt:  -----------------------TIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSILPGKFQWVAIAILFAMAMELWN

A0A6J1FHH1 uncharacterized protein LOC1114440151.6e-5562.78Show/hide
Query:  FTDKICEEVNCGKGNCTADASYPFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVPNNSSFF---------------------
        F DKIC+EVNCGKGNCT D  YPF F C+CDSGWKRTR++DDDLTFLPCVIPNCSL+YGCQ APPPVP+KPVP NSSFF                     
Subjt:  FTDKICEEVNCGKGNCTADASYPFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVPNNSSFF---------------------

Query:  ---------------------DRTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSILPGKFQWVAIAILFAMAMELWN
                             D TIGSDCAKLGIKVANVN++ NGSG G+GTGQGNS+LPGKF WVA+AILF M MELWN
Subjt:  ---------------------DRTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSILPGKFQWVAIAILFAMAMELWN

A0A6J1HQE9 uncharacterized protein LOC1114656667.8e-5561.67Show/hide
Query:  FTDKICEEVNCGKGNCTADASYPFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVPNNSSFF---------------------
        F DKIC+EVNCGKGNCT D  YPF F C+CDSGWKRTR++DDDLTFLPCVIPNCSL+YGCQ APPPVP+KPVP NSSFF                     
Subjt:  FTDKICEEVNCGKGNCTADASYPFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVPNNSSFF---------------------

Query:  ---------------------DRTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSILPGKFQWVAIAILFAMAMELWN
                             D TIGSDCAKLGIKVANVN++ NGSG G+GTGQGNS+LPGKF W A+AI+F M MELWN
Subjt:  ---------------------DRTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSILPGKFQWVAIAILFAMAMELWN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G14746.1 CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); Has 259 Blast hits to 234 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).6.4e-1744.83Show/hide
Query:  DKICEEVNCGKGNCTADASYPFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVP--NNSSFFDRTIGSDC
        D IC+EV CGKG C A ++  F + C+C+ GWK   + D  L FLPC+ PNC+ +  C  A  P   KP P  N +SFFD     DC
Subjt:  DKICEEVNCGKGNCTADASYPFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVP--NNSSFFDRTIGSDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATTTTTTACAGATAAAATATGTGAAGAAGTGAACTGTGGAAAGGGAAATTGTACAGCGGACGCCAGTTATCCGTTCGGATTCATATGCCAATGCGATTCCGGTTG
GAAGCGAACTCGCGAAAACGACGACGATCTCACTTTTCTTCCTTGCGTAATCCCTAACTGTTCTCTCAATTATGGCTGCCAGCCGGCGCCCCCGCCGGTGCCGGAGAAGC
CGGTTCCGAATAACTCCTCTTTCTTCGACCGCACAATTGGATCAGATTGTGCAAAGCTTGGGATTAAAGTTGCGAATGTGAATGCTACTGGTAATGGAAGTGGTTCTGGC
AATGGCACTGGACAAGGAAACTCCATTCTACCAGGAAAGTTTCAGTGGGTAGCTATAGCAATTTTATTTGCCATGGCTATGGAGCTTTGGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTATTTTTTACAGATAAAATATGTGAAGAAGTGAACTGTGGAAAGGGAAATTGTACAGCGGACGCCAGTTATCCGTTCGGATTCATATGCCAATGCGATTCCGGTTG
GAAGCGAACTCGCGAAAACGACGACGATCTCACTTTTCTTCCTTGCGTAATCCCTAACTGTTCTCTCAATTATGGCTGCCAGCCGGCGCCCCCGCCGGTGCCGGAGAAGC
CGGTTCCGAATAACTCCTCTTTCTTCGACCGCACAATTGGATCAGATTGTGCAAAGCTTGGGATTAAAGTTGCGAATGTGAATGCTACTGGTAATGGAAGTGGTTCTGGC
AATGGCACTGGACAAGGAAACTCCATTCTACCAGGAAAGTTTCAGTGGGTAGCTATAGCAATTTTATTTGCCATGGCTATGGAGCTTTGGAACTAGCATATCCTTGATCA
TATCGATATTCATTTTGGTTGTCACACTGTTTTGATTTCATATAGATTATATTATTCTTATATCTTATGTTTGGAGTTTGGTATATATAATAAATAAATCATATCTTTAG
TCCTTGGAGGCTGGTGATGACTGATTTTGTAATAGTTTTGTACAGATATTCATATTATAATGTTATTGTATTATTAATTACT
Protein sequenceShow/hide protein sequence
MVFFTDKICEEVNCGKGNCTADASYPFGFICQCDSGWKRTRENDDDLTFLPCVIPNCSLNYGCQPAPPPVPEKPVPNNSSFFDRTIGSDCAKLGIKVANVNATGNGSGSG
NGTGQGNSILPGKFQWVAIAILFAMAMELWN