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Lsi11G004770 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G004770
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr11:5042151..5042735
RNA-Seq ExpressionLsi11G004770
SyntenyLsi11G004770
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33904.1 hypothetical protein [Cucumis melo subsp. melo]7.3e-5865.17Show/hide
Query:  MADFRYGFFCRPDNKKIESRPEEKSKTSHISDSKSKPARVDAGGRRQPISVLPGTRYVTTTEKYTEEVNS-------STSSGNFQHNHILNQPIEFNKLI
        MADFRYGFF RPDNKKIES PEEKS+  HIS+ KSKP  +D GGR++P ++LP TRYVT  EK+TEEV++       ++  G    N  +NQ IEFNKL+
Subjt:  MADFRYGFFCRPDNKKIESRPEEKSKTSHISDSKSKPARVDAGGRRQPISVLPGTRYVTTTEKYTEEVNS-------STSSGNFQHNHILNQPIEFNKLI

Query:  AKGQKEARQPKHEMISLSDPMNDIEKAMEYLKEAVKLHSGKNNASSASDPHKKDSCTKTIDSKEAARRYGKFGAPTGSVSGANVATIDCKEAARKYKGAT
        AK Q+E R PK+EM  LS+PMNDI KA+E LKEAV L   KNNA SAS  H KDSCTKTIDSKEAARRYG FGA  G VS AN ATI+CKEAARKY GA 
Subjt:  AKGQKEARQPKHEMISLSDPMNDIEKAMEYLKEAVKLHSGKNNASSASDPHKKDSCTKTIDSKEAARRYGKFGAPTGSVSGANVATIDCKEAARKYKGAT

Query:  V
        V
Subjt:  V

KAA0063635.1 hypothetical protein E6C27_scaffold329G001480 [Cucumis melo var. makuwa]2.5e-5865.67Show/hide
Query:  MADFRYGFFCRPDNKKIESRPEEKSKTSHISDSKSKPARVDAGGRRQPISVLPGTRYVTTTEKYTEEVNS-------STSSGNFQHNHILNQPIEFNKLI
        MADFRYGFF RPDNKKIES PEEKS+  HIS+ KSKP  +DAGGR++P ++LP TRYVT  EK+TEEV++       ++  G    N  +NQ IEFNKL+
Subjt:  MADFRYGFFCRPDNKKIESRPEEKSKTSHISDSKSKPARVDAGGRRQPISVLPGTRYVTTTEKYTEEVNS-------STSSGNFQHNHILNQPIEFNKLI

Query:  AKGQKEARQPKHEMISLSDPMNDIEKAMEYLKEAVKLHSGKNNASSASDPHKKDSCTKTIDSKEAARRYGKFGAPTGSVSGANVATIDCKEAARKYKGAT
        AK Q+E R PK+EM  LS+PMNDI KA+E LKEAV L   KNNA SAS  H KDSCTKTIDSKEAARRYG FGA  G VS AN ATI+CKEAARKY GA 
Subjt:  AKGQKEARQPKHEMISLSDPMNDIEKAMEYLKEAVKLHSGKNNASSASDPHKKDSCTKTIDSKEAARRYGKFGAPTGSVSGANVATIDCKEAARKYKGAT

Query:  V
        V
Subjt:  V

KAG6599284.1 putative nucleolar protein 5-2, partial [Cucurbita argyrosperma subsp. sororia]1.3e-4956.94Show/hide
Query:  MADFRYGFFCRPDNKKIESRPEEKSKTSHISDSKSKPARVDAGGRRQPISVLPGTRYVTTTEKYTEEVNSSTSSGNFQHNH-------------------
        MADFRYGFFCRPDNK +E + EEK+ TSHI D K KPA VDAGGRR P  VLP  RYVTTTE YTEE  S++  G FQ++H                   
Subjt:  MADFRYGFFCRPDNKKIESRPEEKSKTSHISDSKSKPARVDAGGRRQPISVLPGTRYVTTTEKYTEEVNSSTSSGNFQHNH-------------------

Query:  -----ILNQPIEFNKLIAKGQKEARQPKHEMISLSDPMNDIEKAMEYLKEAVKLHSGKNNASSASDPHKKDSCTKTIDSKEAARRYGKFGAPTGSVSGAN
              LN+P EFN+L+ K + E  Q KHEM  +S PMNDIEKA+E+ KEAV L   KNNA  A D  KKD  TKTIDS EAARR+G FG P   V  AN
Subjt:  -----ILNQPIEFNKLIAKGQKEARQPKHEMISLSDPMNDIEKAMEYLKEAVKLHSGKNNASSASDPHKKDSCTKTIDSKEAARRYGKFGAPTGSVSGAN

Query:  VATIDCKEAARKYKGA
         ATI+CKEAARKYK +
Subjt:  VATIDCKEAARKYKGA

KGN60838.1 hypothetical protein Csa_019431 [Cucumis sativus]1.5e-5866.83Show/hide
Query:  MADFRYGFFCRPDNKKIESRPEE-KSKTSHISDSKSKPARVDAGGRRQPISVLPGTRYVTTTEKYTEEVNS-------STSSGNFQHNHILNQPIEFNKL
        MADFRYGFF RPDNKKIES P E KSK  HISD KSKP  +DAGGR+QPI++LP TRYVT  EKYTEEV++       ++  G    +  +NQ IEFNKL
Subjt:  MADFRYGFFCRPDNKKIESRPEE-KSKTSHISDSKSKPARVDAGGRRQPISVLPGTRYVTTTEKYTEEVNS-------STSSGNFQHNHILNQPIEFNKL

Query:  IAKGQKEARQPKHEMISLSDPMNDIEKAMEYLKEAVKLHSGKNNASSASDPHKKDSCTKTIDSKEAARRYGKFGAPTGSVSGANVATIDCKEAARKYKGA
        +A  QKEAR PK+EM  LS+PM DI KA+E LKE V L   KNNA +AS   +KDSCTKTIDSKEAARRYGKFGAP   VS ANVATIDCKEAARKY GA
Subjt:  IAKGQKEARQPKHEMISLSDPMNDIEKAMEYLKEAVKLHSGKNNASSASDPHKKDSCTKTIDSKEAARRYGKFGAPTGSVSGANVATIDCKEAARKYKGA

Query:  TV
         V
Subjt:  TV

XP_022743270.1 uncharacterized protein LOC111294277 [Durio zibethinus]5.0e-0645.74Show/hide
Query:  SLSDPMNDIEKAMEYLKEAVKLHSG-----KNNASSASDPHKKDSCTKTIDSKEAARRYGKF---GAPTGSVSGANVATIDCKEAARKYKGATV
        +LS+P +DI  A+ YLKEAV   SG          +AS   K+++  +TIDSKEA RRYG F     PT + +     TID +EAARKY+G TV
Subjt:  SLSDPMNDIEKAMEYLKEAVKLHSG-----KNNASSASDPHKKDSCTKTIDSKEAARRYGKF---GAPTGSVSGANVATIDCKEAARKYKGATV

TrEMBL top hitse value%identityAlignment
A0A0A0LG87 Uncharacterized protein7.2e-5966.83Show/hide
Query:  MADFRYGFFCRPDNKKIESRPEE-KSKTSHISDSKSKPARVDAGGRRQPISVLPGTRYVTTTEKYTEEVNS-------STSSGNFQHNHILNQPIEFNKL
        MADFRYGFF RPDNKKIES P E KSK  HISD KSKP  +DAGGR+QPI++LP TRYVT  EKYTEEV++       ++  G    +  +NQ IEFNKL
Subjt:  MADFRYGFFCRPDNKKIESRPEE-KSKTSHISDSKSKPARVDAGGRRQPISVLPGTRYVTTTEKYTEEVNS-------STSSGNFQHNHILNQPIEFNKL

Query:  IAKGQKEARQPKHEMISLSDPMNDIEKAMEYLKEAVKLHSGKNNASSASDPHKKDSCTKTIDSKEAARRYGKFGAPTGSVSGANVATIDCKEAARKYKGA
        +A  QKEAR PK+EM  LS+PM DI KA+E LKE V L   KNNA +AS   +KDSCTKTIDSKEAARRYGKFGAP   VS ANVATIDCKEAARKY GA
Subjt:  IAKGQKEARQPKHEMISLSDPMNDIEKAMEYLKEAVKLHSGKNNASSASDPHKKDSCTKTIDSKEAARRYGKFGAPTGSVSGANVATIDCKEAARKYKGA

Query:  TV
         V
Subjt:  TV

A0A1R3JVS0 Uncharacterized protein3.2e-0644.68Show/hide
Query:  SLSDPMNDIEKAMEYLKEAVKLHSG-------KNNASSASDPHKKDSCTKTIDSKEAARRYGKFG-APTGSVSGANVATIDCKEAARKYKGATV
        +L +P +DI  A+E+LKE VK  SG       + +    S   K+DS  + IDSKEAARRYG +  A T  +      TID +EAARKY G TV
Subjt:  SLSDPMNDIEKAMEYLKEAVKLHSG-------KNNASSASDPHKKDSCTKTIDSKEAARRYGKFG-APTGSVSGANVATIDCKEAARKYKGATV

A0A5A7VCJ6 Uncharacterized protein1.2e-5865.67Show/hide
Query:  MADFRYGFFCRPDNKKIESRPEEKSKTSHISDSKSKPARVDAGGRRQPISVLPGTRYVTTTEKYTEEVNS-------STSSGNFQHNHILNQPIEFNKLI
        MADFRYGFF RPDNKKIES PEEKS+  HIS+ KSKP  +DAGGR++P ++LP TRYVT  EK+TEEV++       ++  G    N  +NQ IEFNKL+
Subjt:  MADFRYGFFCRPDNKKIESRPEEKSKTSHISDSKSKPARVDAGGRRQPISVLPGTRYVTTTEKYTEEVNS-------STSSGNFQHNHILNQPIEFNKLI

Query:  AKGQKEARQPKHEMISLSDPMNDIEKAMEYLKEAVKLHSGKNNASSASDPHKKDSCTKTIDSKEAARRYGKFGAPTGSVSGANVATIDCKEAARKYKGAT
        AK Q+E R PK+EM  LS+PMNDI KA+E LKEAV L   KNNA SAS  H KDSCTKTIDSKEAARRYG FGA  G VS AN ATI+CKEAARKY GA 
Subjt:  AKGQKEARQPKHEMISLSDPMNDIEKAMEYLKEAVKLHSGKNNASSASDPHKKDSCTKTIDSKEAARRYGKFGAPTGSVSGANVATIDCKEAARKYKGAT

Query:  V
        V
Subjt:  V

A0A6P5YSZ0 uncharacterized protein LOC1112942772.4e-0645.74Show/hide
Query:  SLSDPMNDIEKAMEYLKEAVKLHSG-----KNNASSASDPHKKDSCTKTIDSKEAARRYGKF---GAPTGSVSGANVATIDCKEAARKYKGATV
        +LS+P +DI  A+ YLKEAV   SG          +AS   K+++  +TIDSKEA RRYG F     PT + +     TID +EAARKY+G TV
Subjt:  SLSDPMNDIEKAMEYLKEAVKLHSG-----KNNASSASDPHKKDSCTKTIDSKEAARRYGKF---GAPTGSVSGANVATIDCKEAARKYKGATV

E5GBR2 Uncharacterized protein3.6e-5865.17Show/hide
Query:  MADFRYGFFCRPDNKKIESRPEEKSKTSHISDSKSKPARVDAGGRRQPISVLPGTRYVTTTEKYTEEVNS-------STSSGNFQHNHILNQPIEFNKLI
        MADFRYGFF RPDNKKIES PEEKS+  HIS+ KSKP  +D GGR++P ++LP TRYVT  EK+TEEV++       ++  G    N  +NQ IEFNKL+
Subjt:  MADFRYGFFCRPDNKKIESRPEEKSKTSHISDSKSKPARVDAGGRRQPISVLPGTRYVTTTEKYTEEVNS-------STSSGNFQHNHILNQPIEFNKLI

Query:  AKGQKEARQPKHEMISLSDPMNDIEKAMEYLKEAVKLHSGKNNASSASDPHKKDSCTKTIDSKEAARRYGKFGAPTGSVSGANVATIDCKEAARKYKGAT
        AK Q+E R PK+EM  LS+PMNDI KA+E LKEAV L   KNNA SAS  H KDSCTKTIDSKEAARRYG FGA  G VS AN ATI+CKEAARKY GA 
Subjt:  AKGQKEARQPKHEMISLSDPMNDIEKAMEYLKEAVKLHSGKNNASSASDPHKKDSCTKTIDSKEAARRYGKFGAPTGSVSGANVATIDCKEAARKYKGAT

Query:  V
        V
Subjt:  V

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGATTTTCGATATGGTTTTTTTTGTCGCCCAGACAACAAGAAAATTGAATCACGCCCTGAAGAAAAGAGCAAAACAAGCCATATCTCTGATTCCAAATCTAAGCC
AGCTCGTGTCGATGCCGGAGGAAGGCGACAACCTATCTCCGTGCTGCCCGGAACAAGGTATGTTACGACAACCGAGAAATATACTGAAGAAGTTAACTCAAGTACTTCAA
GTGGTAACTTCCAACATAACCATATTCTTAACCAGCCTATAGAATTCAATAAACTTATAGCCAAAGGCCAAAAGGAAGCAAGGCAGCCAAAACATGAAATGATTAGCTTA
AGTGATCCAATGAATGATATTGAGAAGGCTATGGAGTACTTGAAAGAAGCTGTGAAACTTCACTCTGGCAAAAATAATGCTTCTTCTGCATCAGATCCTCATAAGAAAGA
TAGTTGCACAAAAACTATTGACAGCAAAGAAGCAGCACGACGGTACGGGAAGTTCGGGGCACCGACTGGCTCGGTGTCGGGTGCCAATGTAGCAACCATTGATTGCAAAG
AGGCTGCTAGGAAGTATAAAGGTGCAACCGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGATTTTCGATATGGTTTTTTTTGTCGCCCAGACAACAAGAAAATTGAATCACGCCCTGAAGAAAAGAGCAAAACAAGCCATATCTCTGATTCCAAATCTAAGCC
AGCTCGTGTCGATGCCGGAGGAAGGCGACAACCTATCTCCGTGCTGCCCGGAACAAGGTATGTTACGACAACCGAGAAATATACTGAAGAAGTTAACTCAAGTACTTCAA
GTGGTAACTTCCAACATAACCATATTCTTAACCAGCCTATAGAATTCAATAAACTTATAGCCAAAGGCCAAAAGGAAGCAAGGCAGCCAAAACATGAAATGATTAGCTTA
AGTGATCCAATGAATGATATTGAGAAGGCTATGGAGTACTTGAAAGAAGCTGTGAAACTTCACTCTGGCAAAAATAATGCTTCTTCTGCATCAGATCCTCATAAGAAAGA
TAGTTGCACAAAAACTATTGACAGCAAAGAAGCAGCACGACGGTACGGGAAGTTCGGGGCACCGACTGGCTCGGTGTCGGGTGCCAATGTAGCAACCATTGATTGCAAAG
AGGCTGCTAGGAAGTATAAAGGTGCAACCGTGTGA
Protein sequenceShow/hide protein sequence
MADFRYGFFCRPDNKKIESRPEEKSKTSHISDSKSKPARVDAGGRRQPISVLPGTRYVTTTEKYTEEVNSSTSSGNFQHNHILNQPIEFNKLIAKGQKEARQPKHEMISL
SDPMNDIEKAMEYLKEAVKLHSGKNNASSASDPHKKDSCTKTIDSKEAARRYGKFGAPTGSVSGANVATIDCKEAARKYKGATV