; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G004960 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G004960
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNBS-LRR resistance protein
Genome locationchr11:5245101..5245526
RNA-Seq ExpressionLsi11G004960
SyntenyLsi11G004960
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0043531 - ADP binding (molecular function)
InterPro domainsIPR002182 - NB-ARC
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR042197 - Apoptotic protease-activating factors, helical domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AIU36098.1 vat protein [Cucumis melo]7.0e-5075.18Show/hide
Query:  MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIA
        ME+SILV+LDDVW+YI+LETIGIPSVEDHTGCKILFT+R  HL +N++  +KIFEIKVLG+DESWNLF+A MAG I+D A DL PIAI+IVREC GLPIA
Subjt:  MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIA

Query:  ITTVAKALQNKPSAIWKDALDQLRRDDVVMSNIRGMNKKVY
        ITTVAKAL+NKPS IW DALDQL+  DV M+NI  M KKVY
Subjt:  ITTVAKALQNKPSAIWKDALDQLRRDDVVMSNIRGMNKKVY

AIU36099.1 vat-like protein [Cucumis melo]7.0e-5075.18Show/hide
Query:  MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIA
        ME+SILV+LDDVW+YI+LETIGIPSVEDHTGCKILFT+R  HL +N++  +KIFEIKVLG+DESWNLF+A MAG I+D A DL PIAI+IVREC GLPIA
Subjt:  MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIA

Query:  ITTVAKALQNKPSAIWKDALDQLRRDDVVMSNIRGMNKKVY
        ITTVAKAL+NKPS IW DALDQL+  DV M+NI  M KKVY
Subjt:  ITTVAKALQNKPSAIWKDALDQLRRDDVVMSNIRGMNKKVY

KAA0063669.1 vat protein [Cucumis melo var. makuwa]7.0e-5075.18Show/hide
Query:  MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIA
        ME+SILV+LDDVW+YI+LETIGIPSVEDHTGCKILFT+R  HL +N++  +KIFEIKVLG+DESWNLF+A MAG I+D A DL PIAI+IVREC GLPIA
Subjt:  MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIA

Query:  ITTVAKALQNKPSAIWKDALDQLRRDDVVMSNIRGMNKKVY
        ITTVAKAL+NKPS IW DALDQL+  DV M+NI  M KKVY
Subjt:  ITTVAKALQNKPSAIWKDALDQLRRDDVVMSNIRGMNKKVY

TYK18357.1 putative disease resistance protein [Cucumis melo var. makuwa]7.0e-5075.18Show/hide
Query:  MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIA
        ME+SILV+LDDVW+YI+LETIGIPSVEDHTGCKILFT+R  HL +N++  +KIFEIKVLG+DESWNLF+A MAG I+D A DL PIAI+IVREC GLPIA
Subjt:  MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIA

Query:  ITTVAKALQNKPSAIWKDALDQLRRDDVVMSNIRGMNKKVY
        ITTVAKAL+NKPS IW DALDQL+  DV M+NI  M KKVY
Subjt:  ITTVAKALQNKPSAIWKDALDQLRRDDVVMSNIRGMNKKVY

XP_011650207.1 probable disease resistance protein At4g27220 [Cucumis sativus]1.1e-5074.47Show/hide
Query:  MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIA
        ME+ ILV+LDD+W+YI+LETIGIPSVEDHTGCKILFTSR+ HL +N++  ++IFEIKVLGE+ESWNLF+A MAGKI+ EA DL PIAIQ+VREC GLPIA
Subjt:  MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIA

Query:  ITTVAKALQNKPSAIWKDALDQLRRDDVVMSNIRGMNKKVY
        ITTVAKAL+NKPS IW DALDQL+  DV M+NI  M+KKVY
Subjt:  ITTVAKALQNKPSAIWKDALDQLRRDDVVMSNIRGMNKKVY

TrEMBL top hitse value%identityAlignment
A0A097NYW9 Vat-like protein3.4e-5075.18Show/hide
Query:  MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIA
        ME+SILV+LDDVW+YI+LETIGIPSVEDHTGCKILFT+R  HL +N++  +KIFEIKVLG+DESWNLF+A MAG I+D A DL PIAI+IVREC GLPIA
Subjt:  MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIA

Query:  ITTVAKALQNKPSAIWKDALDQLRRDDVVMSNIRGMNKKVY
        ITTVAKAL+NKPS IW DALDQL+  DV M+NI  M KKVY
Subjt:  ITTVAKALQNKPSAIWKDALDQLRRDDVVMSNIRGMNKKVY

A0A097NYY2 Vat protein3.4e-5075.18Show/hide
Query:  MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIA
        ME+SILV+LDDVW+YI+LETIGIPSVEDHTGCKILFT+R  HL +N++  +KIFEIKVLG+DESWNLF+A MAG I+D A DL PIAI+IVREC GLPIA
Subjt:  MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIA

Query:  ITTVAKALQNKPSAIWKDALDQLRRDDVVMSNIRGMNKKVY
        ITTVAKAL+NKPS IW DALDQL+  DV M+NI  M KKVY
Subjt:  ITTVAKALQNKPSAIWKDALDQLRRDDVVMSNIRGMNKKVY

A0A0A0LMT4 NB-ARC domain-containing protein5.2e-5174.47Show/hide
Query:  MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIA
        ME+ ILV+LDD+W+YI+LETIGIPSVEDHTGCKILFTSR+ HL +N++  ++IFEIKVLGE+ESWNLF+A MAGKI+ EA DL PIAIQ+VREC GLPIA
Subjt:  MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIA

Query:  ITTVAKALQNKPSAIWKDALDQLRRDDVVMSNIRGMNKKVY
        ITTVAKAL+NKPS IW DALDQL+  DV M+NI  M+KKVY
Subjt:  ITTVAKALQNKPSAIWKDALDQLRRDDVVMSNIRGMNKKVY

A0A5A7VDU6 Vat protein3.4e-5075.18Show/hide
Query:  MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIA
        ME+SILV+LDDVW+YI+LETIGIPSVEDHTGCKILFT+R  HL +N++  +KIFEIKVLG+DESWNLF+A MAG I+D A DL PIAI+IVREC GLPIA
Subjt:  MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIA

Query:  ITTVAKALQNKPSAIWKDALDQLRRDDVVMSNIRGMNKKVY
        ITTVAKAL+NKPS IW DALDQL+  DV M+NI  M KKVY
Subjt:  ITTVAKALQNKPSAIWKDALDQLRRDDVVMSNIRGMNKKVY

A0A5D3D490 Putative disease resistance protein3.4e-5075.18Show/hide
Query:  MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIA
        ME+SILV+LDDVW+YI+LETIGIPSVEDHTGCKILFT+R  HL +N++  +KIFEIKVLG+DESWNLF+A MAG I+D A DL PIAI+IVREC GLPIA
Subjt:  MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIA

Query:  ITTVAKALQNKPSAIWKDALDQLRRDDVVMSNIRGMNKKVY
        ITTVAKAL+NKPS IW DALDQL+  DV M+NI  M KKVY
Subjt:  ITTVAKALQNKPSAIWKDALDQLRRDDVVMSNIRGMNKKVY

SwissProt top hitse value%identityAlignment
O64790 Probable disease resistance protein At1g613003.8e-1430.15Show/hide
Query:  KSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRE----CGGLP
        K  +++LDD+W+ ++LE IG+P   +   CK+ FT+RD  +   E+   K  ++K L  +++W LF+     K+ D      P+ +++ RE    C GLP
Subjt:  KSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRE----CGGLP

Query:  IAITTVAKALQNKPSA-IWKDALDQLRRDDVVMSNI
        +A++ + + + +K     W+ A+D L R     SN+
Subjt:  IAITTVAKALQNKPSA-IWKDALDQLRRDDVVMSNI

O64973 Disease resistance protein RPS51.3e-1429.55Show/hide
Query:  KSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAIT
        +  ++LLDD+W+ +NL+ +G+P      GCK+ FT+R   +    + VD   E+  L  +ESW+LF+  +    +    D+  +A ++ R+C GLP+A+ 
Subjt:  KSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAIT

Query:  TVAKALQNKPSA-IWKDALDQLRRDDVVMSNI
         + +A+  K +   W  A+D L    +  S +
Subjt:  TVAKALQNKPSA-IWKDALDQLRRDDVVMSNI

P60838 Disease resistance protein SUMM21.1e-1329.27Show/hide
Query:  EKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAI
        ++  ++LLDD+W+ +NLE +G+P      GCK++FT+R   +    + VD   E+  L  +E+W LF+  +    +    D+  +A ++  +C GLP+A+
Subjt:  EKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAI

Query:  TTVAKALQNKPSA-IWKDALDQL
          + + +  K     W++A+D L
Subjt:  TTVAKALQNKPSA-IWKDALDQL

P60839 Probable disease resistance protein At1g122902.4e-1332.23Show/hide
Query:  EKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAI
        +K  ++LLDD+W  + L  IGIP+     GCKI FT+R   + A+ + V    E++ LG D++W+LF+  +    +    D+  IA ++ + C GLP+A+
Subjt:  EKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAI

Query:  TTVAKALQ-NKPSAIWKDALD
          + + +   K +  W  A+D
Subjt:  TTVAKALQ-NKPSAIWKDALD

Q9T048 Disease resistance protein At4g271901.4e-1331.91Show/hide
Query:  EKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAI
        E+  L++LDDVW  I+L+ +GIP  E++ G K++ TSR   +    +  D    +  L E+++W LF    AG ++  +  +  IA  + +ECGGLP+AI
Subjt:  EKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAI

Query:  TTVAKALQNKPSA-IWKDALDQLRRDDVVMSNIRGMNKKVY
         TV  A++ K +  +W   L +L +    +  I+ + +K++
Subjt:  TTVAKALQNKPSA-IWKDALDQLRRDDVVMSNIRGMNKKVY

Arabidopsis top hitse value%identityAlignment
AT1G12220.1 Disease resistance protein (CC-NBS-LRR class) family9.2e-1629.55Show/hide
Query:  KSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAIT
        +  ++LLDD+W+ +NL+ +G+P      GCK+ FT+R   +    + VD   E+  L  +ESW+LF+  +    +    D+  +A ++ R+C GLP+A+ 
Subjt:  KSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAIT

Query:  TVAKALQNKPSA-IWKDALDQLRRDDVVMSNI
         + +A+  K +   W  A+D L    +  S +
Subjt:  TVAKALQNKPSA-IWKDALDQLRRDDVVMSNI

AT1G12220.2 Disease resistance protein (CC-NBS-LRR class) family9.2e-1629.55Show/hide
Query:  KSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAIT
        +  ++LLDD+W+ +NL+ +G+P      GCK+ FT+R   +    + VD   E+  L  +ESW+LF+  +    +    D+  +A ++ R+C GLP+A+ 
Subjt:  KSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAIT

Query:  TVAKALQNKPSA-IWKDALDQLRRDDVVMSNI
         + +A+  K +   W  A+D L    +  S +
Subjt:  TVAKALQNKPSA-IWKDALDQLRRDDVVMSNI

AT1G12280.1 LRR and NB-ARC domains-containing disease resistance protein7.8e-1529.27Show/hide
Query:  EKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAI
        ++  ++LLDD+W+ +NLE +G+P      GCK++FT+R   +    + VD   E+  L  +E+W LF+  +    +    D+  +A ++  +C GLP+A+
Subjt:  EKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAI

Query:  TTVAKALQNKPSA-IWKDALDQL
          + + +  K     W++A+D L
Subjt:  TTVAKALQNKPSA-IWKDALDQL

AT1G61300.1 LRR and NB-ARC domains-containing disease resistance protein2.7e-1530.15Show/hide
Query:  KSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRE----CGGLP
        K  +++LDD+W+ ++LE IG+P   +   CK+ FT+RD  +   E+   K  ++K L  +++W LF+     K+ D      P+ +++ RE    C GLP
Subjt:  KSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRE----CGGLP

Query:  IAITTVAKALQNKPSA-IWKDALDQLRRDDVVMSNI
        +A++ + + + +K     W+ A+D L R     SN+
Subjt:  IAITTVAKALQNKPSA-IWKDALDQLRRDDVVMSNI

AT4G27190.1 NB-ARC domain-containing disease resistance protein1.0e-1431.91Show/hide
Query:  EKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAI
        E+  L++LDDVW  I+L+ +GIP  E++ G K++ TSR   +    +  D    +  L E+++W LF    AG ++  +  +  IA  + +ECGGLP+AI
Subjt:  EKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAI

Query:  TTVAKALQNKPSA-IWKDALDQLRRDDVVMSNIRGMNKKVY
         TV  A++ K +  +W   L +L +    +  I+ + +K++
Subjt:  TTVAKALQNKPSA-IWKDALDQLRRDDVVMSNIRGMNKKVY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAAGTATCCTAGTTTTGTTGGATGATGTCTGGGATTATATTAATTTGGAAACAATAGGAATTCCAAGTGTTGAAGATCACACAGGATGCAAAATCTTGTTTAC
CTCTAGAGATACACATTTGTTCGCAAATGAAATCTATGTCGATAAAATCTTTGAGATAAAAGTTTTAGGAGAAGATGAGTCGTGGAATTTATTTGAGGCAATAATGGCAG
GTAAAATAATTGATGAAGCATGTGATCTGACGCCTATAGCTATTCAAATTGTGAGAGAATGTGGAGGTTTGCCTATTGCTATCACTACTGTTGCTAAGGCATTACAAAAT
AAACCATCCGCCATTTGGAAGGATGCCTTGGATCAACTAAGAAGGGATGATGTGGTTATGTCGAACATTAGAGGAATGAACAAGAAAGTGTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAAGTATCCTAGTTTTGTTGGATGATGTCTGGGATTATATTAATTTGGAAACAATAGGAATTCCAAGTGTTGAAGATCACACAGGATGCAAAATCTTGTTTAC
CTCTAGAGATACACATTTGTTCGCAAATGAAATCTATGTCGATAAAATCTTTGAGATAAAAGTTTTAGGAGAAGATGAGTCGTGGAATTTATTTGAGGCAATAATGGCAG
GTAAAATAATTGATGAAGCATGTGATCTGACGCCTATAGCTATTCAAATTGTGAGAGAATGTGGAGGTTTGCCTATTGCTATCACTACTGTTGCTAAGGCATTACAAAAT
AAACCATCCGCCATTTGGAAGGATGCCTTGGATCAACTAAGAAGGGATGATGTGGTTATGTCGAACATTAGAGGAATGAACAAGAAAGTGTATTGA
Protein sequenceShow/hide protein sequence
MEKSILVLLDDVWDYINLETIGIPSVEDHTGCKILFTSRDTHLFANEIYVDKIFEIKVLGEDESWNLFEAIMAGKIIDEACDLTPIAIQIVRECGGLPIAITTVAKALQN
KPSAIWKDALDQLRRDDVVMSNIRGMNKKVY