; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G004970 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G004970
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNB-ARC domain-containing protein
Genome locationchr11:5245707..5250693
RNA-Seq ExpressionLsi11G004970
SyntenyLsi11G004970
Gene Ontology termsGO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651579.1 hypothetical protein Csa_023428 [Cucumis sativus]1.2e-4456.98Show/hide
Query:  IRGVGRELGHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSREATKLAD
        ++ VGR+L ++CF+  NFQ+LK+QVEKL +TK SV+ KV  A RNAEDI+  VE WL K D +V KSE ILA++  HG LCSTN +QR+K SR+A+K+AD
Subjt:  IRGVGRELGHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSREATKLAD

Query:  EAVKMKDEGDNFDTVSFKGSVSLAESLENHA--FHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL
        E ++MK++G++FD VSFKG +SL ES    A  F +F SRKST+E+IMDA+ +DNVH+IGVYG+G + K  L
Subjt:  EAVKMKDEGDNFDTVSFKGSVSLAESLENHA--FHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL

TYK18357.1 putative disease resistance protein [Cucumis melo var. makuwa]2.6e-4457.56Show/hide
Query:  IRGVGRELGHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSREATKLAD
        +  VGR+LG++ F+  NFQ+LK QVEKLK T+ESVQHK+ +A RNAEDI+  VE WL K DD V +S+ ILAN+ GHGGLCST  +QR+KLSR+A+K+ D
Subjt:  IRGVGRELGHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSREATKLAD

Query:  EAVKMKDEGDNFDTVSFKGSV-SLAESLEN-HAFHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL
        E ++MK+EG++FD VS+K  + S+  SL     F +FESRKS ME+IMDA+ + NVHRIGVYG+G + K  L
Subjt:  EAVKMKDEGDNFDTVSFKGSV-SLAESLEN-HAFHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL

XP_011648792.1 uncharacterized protein LOC101216156 [Cucumis sativus]1.2e-4456.98Show/hide
Query:  IRGVGRELGHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSREATKLAD
        ++ VGR+L ++CF+  NFQ+LK+QVEKL +TK SV+ KV  A RNAEDI+  VE WL K D +V KSE ILA++  HG LCSTN +QR+K SR+A+K+AD
Subjt:  IRGVGRELGHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSREATKLAD

Query:  EAVKMKDEGDNFDTVSFKGSVSLAESLENHA--FHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL
        E ++MK++G++FD VSFKG +SL ES    A  F +F SRKST+E+IMDA+ +DNVH+IGVYG+G + K  L
Subjt:  EAVKMKDEGDNFDTVSFKGSVSLAESLENHA--FHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL

XP_038890202.1 disease resistance protein At4g27190-like isoform X1 [Benincasa hispida]1.1e-4556.9Show/hide
Query:  IRGVGRELGHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSREATKLAD
        +  V RELG++CF+ GNFQ+LK++VE+LK+T+ESVQ +V  A RNAEDI+ VVE WL + DDI+ KSEAIL N+  HG LCSTN +QR+KLSR+A K+AD
Subjt:  IRGVGRELGHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSREATKLAD

Query:  EAVKMKDEGDNFDTVSFKGSVSLAE---SLENHA-FHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL
        E ++MK++G+NF TV+++ +VSL E   SL     F +FESRKST+E+IMDA+ +DNVH +GV+G+G + K  L
Subjt:  EAVKMKDEGDNFDTVSFKGSVSLAE---SLENHA-FHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL

XP_038890206.1 disease resistance protein At4g27190-like isoform X2 [Benincasa hispida]1.1e-4556.9Show/hide
Query:  IRGVGRELGHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSREATKLAD
        +  V RELG++CF+ GNFQ+LK++VE+LK+T+ESVQ +V  A RNAEDI+ VVE WL + DDI+ KSEAIL N+  HG LCSTN +QR+KLSR+A K+AD
Subjt:  IRGVGRELGHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSREATKLAD

Query:  EAVKMKDEGDNFDTVSFKGSVSLAE---SLENHA-FHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL
        E ++MK++G+NF TV+++ +VSL E   SL     F +FESRKST+E+IMDA+ +DNVH +GV+G+G + K  L
Subjt:  EAVKMKDEGDNFDTVSFKGSVSLAE---SLENHA-FHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL

TrEMBL top hitse value%identityAlignment
A0A097NYY2 Vat protein1.3e-4457.56Show/hide
Query:  IRGVGRELGHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSREATKLAD
        +  VGR+LG++ F+  NFQ+LK QVEKLK T+ESVQHK+ +A RNAEDI+  VE WL K DD V +S+ ILAN+ GHGGLCST  +QR+KLSR+A+K+ D
Subjt:  IRGVGRELGHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSREATKLAD

Query:  EAVKMKDEGDNFDTVSFKGSV-SLAESLEN-HAFHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL
        E ++MK+EG++FD VS+K  + S+  SL     F +FESRKS ME+IMDA+ + NVHRIGVYG+G + K  L
Subjt:  EAVKMKDEGDNFDTVSFKGSV-SLAESLEN-HAFHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL

A0A0A0LLJ0 NB-ARC domain-containing protein5.6e-4556.98Show/hide
Query:  IRGVGRELGHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSREATKLAD
        ++ VGR+L ++CF+  NFQ+LK+QVEKL +TK SV+ KV  A RNAEDI+  VE WL K D +V KSE ILA++  HG LCSTN +QR+K SR+A+K+AD
Subjt:  IRGVGRELGHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSREATKLAD

Query:  EAVKMKDEGDNFDTVSFKGSVSLAESLENHA--FHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL
        E ++MK++G++FD VSFKG +SL ES    A  F +F SRKST+E+IMDA+ +DNVH+IGVYG+G + K  L
Subjt:  EAVKMKDEGDNFDTVSFKGSVSLAESLENHA--FHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL

A0A5A7VDU6 Vat protein1.3e-4457.56Show/hide
Query:  IRGVGRELGHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSREATKLAD
        +  VGR+LG++ F+  NFQ+LK QVEKLK T+ESVQHK+ +A RNAEDI+  VE WL K DD V +S+ ILAN+ GHGGLCST  +QR+KLSR+A+K+ D
Subjt:  IRGVGRELGHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSREATKLAD

Query:  EAVKMKDEGDNFDTVSFKGSV-SLAESLEN-HAFHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL
        E ++MK+EG++FD VS+K  + S+  SL     F +FESRKS ME+IMDA+ + NVHRIGVYG+G + K  L
Subjt:  EAVKMKDEGDNFDTVSFKGSV-SLAESLEN-HAFHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL

A0A5D3D479 Putative disease resistance protein1.3e-4457.56Show/hide
Query:  IRGVGRELGHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSREATKLAD
        +  VGR+LG++ F+  NFQ+LK QVEKLK T+ESVQHK+ +A RNAEDI+  VE WL K DD V +S+ ILAN+ GHGGLCST  +QR+KLSR+A+K+ D
Subjt:  IRGVGRELGHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSREATKLAD

Query:  EAVKMKDEGDNFDTVSFKGSV-SLAESLEN-HAFHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL
        E ++MK+EG++FD VS+K  + S+  SL     F +FESRKS ME+IMDA+ + NVHRIGVYG+G + K  L
Subjt:  EAVKMKDEGDNFDTVSFKGSV-SLAESLEN-HAFHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL

A0A5D3D490 Putative disease resistance protein1.3e-4457.56Show/hide
Query:  IRGVGRELGHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSREATKLAD
        +  VGR+LG++ F+  NFQ+LK QVEKLK T+ESVQHK+ +A RNAEDI+  VE WL K DD V +S+ ILAN+ GHGGLCST  +QR+KLSR+A+K+ D
Subjt:  IRGVGRELGHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSREATKLAD

Query:  EAVKMKDEGDNFDTVSFKGSV-SLAESLEN-HAFHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL
        E ++MK+EG++FD VS+K  + S+  SL     F +FESRKS ME+IMDA+ + NVHRIGVYG+G + K  L
Subjt:  EAVKMKDEGDNFDTVSFKGSV-SLAESLEN-HAFHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL

SwissProt top hitse value%identityAlignment
O22727 Probable disease resistance protein At1g611905.9e-0725Show/hide
Query:  GHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGH------GGLCSTNPIQRYKLSREATKLADEA
        G++  L+ N + L+ ++E L+ T+  VQ+KV       +     V++WL + + I  + + +L+            GLCS      YK  +    L +E 
Subjt:  GHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGH------GGLCSTNPIQRYKLSREATKLADEA

Query:  VKMKDEGDNFDTVSFKGSVSLAESLENHAFHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL
         K+K EG NFD VS     S    +E         ++  +++  + +  D V  +G++G+G + K  L
Subjt:  VKMKDEGDNFDTVSFKGSVSLAESLENHAFHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL

O64789 Probable disease resistance protein At1g613101.9e-0524.54Show/hide
Query:  LDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGH------GGLCSTNPIQRYKLSREATKLADEAVKMKD
        L+ N + L+ ++E L+ T+  VQ+KV       +     V++WL + + I  + + +L+            GLC+      YK  ++   L +E   +K 
Subjt:  LDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGH------GGLCSTNPIQRYKLSREATKLADEAVKMKD

Query:  EGDNFDTVSFKGSVSLAESLENHAFHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL
        EG NFD VS     S    +E         ++  +E+  + +  D V  +G++G+G + K  L
Subjt:  EGDNFDTVSFKGSVSLAESLENHAFHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL

Arabidopsis top hitse value%identityAlignment
AT1G61190.1 LRR and NB-ARC domains-containing disease resistance protein4.2e-0825Show/hide
Query:  GHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGH------GGLCSTNPIQRYKLSREATKLADEA
        G++  L+ N + L+ ++E L+ T+  VQ+KV       +     V++WL + + I  + + +L+            GLCS      YK  +    L +E 
Subjt:  GHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGH------GGLCSTNPIQRYKLSREATKLADEA

Query:  VKMKDEGDNFDTVSFKGSVSLAESLENHAFHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL
         K+K EG NFD VS     S    +E         ++  +++  + +  D V  +G++G+G + K  L
Subjt:  VKMKDEGDNFDTVSFKGSVSLAESLENHAFHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL

AT1G61310.1 LRR and NB-ARC domains-containing disease resistance protein1.3e-0624.54Show/hide
Query:  LDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGH------GGLCSTNPIQRYKLSREATKLADEAVKMKD
        L+ N + L+ ++E L+ T+  VQ+KV       +     V++WL + + I  + + +L+            GLC+      YK  ++   L +E   +K 
Subjt:  LDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGH------GGLCSTNPIQRYKLSREATKLADEAVKMKD

Query:  EGDNFDTVSFKGSVSLAESLENHAFHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL
        EG NFD VS     S    +E         ++  +E+  + +  D V  +G++G+G + K  L
Subjt:  EGDNFDTVSFKGSVSLAESLENHAFHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL

AT4G27220.1 NB-ARC domain-containing disease resistance protein9.6e-0523.08Show/hide
Query:  NFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSREATKLADEAVKMKDEG-DNFDTV
        N + L   +E+LK  +  V   +  +    + +   + IWL K ++ V   E IL   S     C+        LS +  ++ ++  +++++G D    +
Subjt:  NFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSREATKLADEAVKMKDEG-DNFDTV

Query:  SF-KGSVSLAESLENHAFHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL
        S  K S  + E +   +FH  ++    ++++ D +   NV +IGV+G+G + K  L
Subjt:  SF-KGSVSLAESLENHAFHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTTTTCTTTTTGAAGATCAAGAACATGGCAATGAACATTCTTATTAGAGGCGTTGGACGTGAACTTGGTCATCTATGTTTCCTTGATGGCAACTTCCAAGAACT
CAAGAATCAAGTAGAAAAGCTGAAGGAGACAAAAGAATCTGTGCAACACAAGGTCTGTACTGCAAGTAGAAATGCAGAAGACATAAGATCTGTTGTTGAGATATGGTTGA
TTAAGTTTGATGACATTGTTGCAAAATCGGAGGCGATACTTGCCAATGACAGTGGACATGGTGGACTGTGTTCCACGAATCCGATCCAACGATACAAGTTAAGTAGAGAA
GCAACGAAACTGGCAGATGAGGCTGTTAAGATGAAAGATGAAGGGGATAATTTTGATACGGTATCCTTTAAAGGAAGTGTCTCATTGGCTGAGAGTTTAGAAAACCATGC
CTTTCACAACTTTGAGTCAAGAAAGTCGACTATGGAAGAAATCATGGATGCAGTCTTTAATGATAATGTCCACAGGATTGGAGTGTACGGGATCGGGGTGTTGGCAAAAC
AATGCTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTTTTCTTTTTGAAGATCAAGAACATGGCAATGAACATTCTTATTAGAGGCGTTGGACGTGAACTTGGTCATCTATGTTTCCTTGATGGCAACTTCCAAGAACT
CAAGAATCAAGTAGAAAAGCTGAAGGAGACAAAAGAATCTGTGCAACACAAGGTCTGTACTGCAAGTAGAAATGCAGAAGACATAAGATCTGTTGTTGAGATATGGTTGA
TTAAGTTTGATGACATTGTTGCAAAATCGGAGGCGATACTTGCCAATGACAGTGGACATGGTGGACTGTGTTCCACGAATCCGATCCAACGATACAAGTTAAGTAGAGAA
GCAACGAAACTGGCAGATGAGGCTGTTAAGATGAAAGATGAAGGGGATAATTTTGATACGGTATCCTTTAAAGGAAGTGTCTCATTGGCTGAGAGTTTAGAAAACCATGC
CTTTCACAACTTTGAGTCAAGAAAGTCGACTATGGAAGAAATCATGGATGCAGTCTTTAATGATAATGTCCACAGGATTGGAGTGTACGGGATCGGGGTGTTGGCAAAAC
AATGCTTGTAA
Protein sequenceShow/hide protein sequence
MEVFFLKIKNMAMNILIRGVGRELGHLCFLDGNFQELKNQVEKLKETKESVQHKVCTASRNAEDIRSVVEIWLIKFDDIVAKSEAILANDSGHGGLCSTNPIQRYKLSRE
ATKLADEAVKMKDEGDNFDTVSFKGSVSLAESLENHAFHNFESRKSTMEEIMDAVFNDNVHRIGVYGIGVLAKQCL