; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G005060 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G005060
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTMV resistance protein N-like
Genome locationchr11:5392323..5393656
RNA-Seq ExpressionLsi11G005060
SyntenyLsi11G005060
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0007165 - signal transduction (biological process)
GO:0003953 - NAD+ nucleosidase activity (molecular function)
GO:0043531 - ADP binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063675.1 TMV resistance protein N-like [Cucumis melo var. makuwa]2.8e-4381.42Show/hide
Query:  MRKFPSSTSEYTWLVITSSPTFSTSLEMNDWNDVIVWFEVVKCPEVTVTIRSCGVHLTEEVHGIQNDVKGPRVIYTDFDQSDELSSWDVLKSLAQEASA-
        MRKFPSSTSEYTWLV TSSPTFSTSLEMN+WN V VWFEVVKC EVTVTI+ CGVHLTEEVHGIQNDVKGP VIYT FDQ D+L S DV+KS AQE SA 
Subjt:  MRKFPSSTSEYTWLVITSSPTFSTSLEMNDWNDVIVWFEVVKCPEVTVTIRSCGVHLTEEVHGIQNDVKGPRVIYTDFDQSDELSSWDVLKSLAQEASA-

Query:  TDWNAVYHAENFP
        +D NA+ HAENFP
Subjt:  TDWNAVYHAENFP

KAE8651581.1 hypothetical protein Csa_023426 [Cucumis sativus]5.4e-4278.76Show/hide
Query:  MRKFPSSTSEYTWLVITSSPTFSTSLEMNDWNDVIVWFEVVKCPEVTVTIRSCGVHLTEEVHGIQNDVKGPRVIYTDFDQSDELSSWDVLKSLAQEASA-
        MRKFPSSTSEYTWLV TSSPTFSTSLEMN+WN V VWFEVVKC E TVTI+ CGVHLTEEVHGIQNDVKGP V+YT FDQ D+L S DV+KS  QE SA 
Subjt:  MRKFPSSTSEYTWLVITSSPTFSTSLEMNDWNDVIVWFEVVKCPEVTVTIRSCGVHLTEEVHGIQNDVKGPRVIYTDFDQSDELSSWDVLKSLAQEASA-

Query:  TDWNAVYHAENFP
        +D NA+ HAENFP
Subjt:  TDWNAVYHAENFP

XP_008455171.1 PREDICTED: LOW QUALITY PROTEIN: TMV resistance protein N-like [Cucumis melo]2.8e-4381.42Show/hide
Query:  MRKFPSSTSEYTWLVITSSPTFSTSLEMNDWNDVIVWFEVVKCPEVTVTIRSCGVHLTEEVHGIQNDVKGPRVIYTDFDQSDELSSWDVLKSLAQEASA-
        MRKFPSSTSEYTWLV TSSPTFSTSLEMN+WN V VWFEVVKC EVTVTI+ CGVHLTEEVHGIQNDVKGP VIYT FDQ D+L S DV+KS AQE SA 
Subjt:  MRKFPSSTSEYTWLVITSSPTFSTSLEMNDWNDVIVWFEVVKCPEVTVTIRSCGVHLTEEVHGIQNDVKGPRVIYTDFDQSDELSSWDVLKSLAQEASA-

Query:  TDWNAVYHAENFP
        +D NA+ HAENFP
Subjt:  TDWNAVYHAENFP

XP_031736894.1 TMV resistance protein N [Cucumis sativus]5.4e-4278.76Show/hide
Query:  MRKFPSSTSEYTWLVITSSPTFSTSLEMNDWNDVIVWFEVVKCPEVTVTIRSCGVHLTEEVHGIQNDVKGPRVIYTDFDQSDELSSWDVLKSLAQEASA-
        MRKFPSSTSEYTWLV TSSPTFSTSLEMN+WN V VWFEVVKC E TVTI+ CGVHLTEEVHGIQNDVKGP V+YT FDQ D+L S DV+KS  QE SA 
Subjt:  MRKFPSSTSEYTWLVITSSPTFSTSLEMNDWNDVIVWFEVVKCPEVTVTIRSCGVHLTEEVHGIQNDVKGPRVIYTDFDQSDELSSWDVLKSLAQEASA-

Query:  TDWNAVYHAENFP
        +D NA+ HAENFP
Subjt:  TDWNAVYHAENFP

XP_038877735.1 disease resistance protein RPS6-like, partial [Benincasa hispida]2.1e-4677.34Show/hide
Query:  MRKFPSSTSEYTWLVITSSPTFSTSLEMNDWNDVIVWFEVVKCPEVTVTIRSCGVHLTEEVHGIQNDVKGPRVIYTDFDQSDELSSWDVLKSLAQEASA-
        MRKFPSSTSEYTWLV TSSPTFSTSLEMN+WN VIVWFEVVKC EVTVTIRSCGVHLTEEVHGIQNDVKGP VIYTDFDQ DEL S DV+K  AQE SA 
Subjt:  MRKFPSSTSEYTWLVITSSPTFSTSLEMNDWNDVIVWFEVVKCPEVTVTIRSCGVHLTEEVHGIQNDVKGPRVIYTDFDQSDELSSWDVLKSLAQEASA-

Query:  TDWNAVYHAENFPGIKEDDIREEPYWNY
        +D NA+ HAENFP + +DD + + + N+
Subjt:  TDWNAVYHAENFPGIKEDDIREEPYWNY

TrEMBL top hitse value%identityAlignment
A0A0A0LLK3 TIR domain-containing protein2.6e-4278.76Show/hide
Query:  MRKFPSSTSEYTWLVITSSPTFSTSLEMNDWNDVIVWFEVVKCPEVTVTIRSCGVHLTEEVHGIQNDVKGPRVIYTDFDQSDELSSWDVLKSLAQEASA-
        MRKFPSSTSEYTWLV TSSPTFSTSLEMN+WN V VWFEVVKC E TVTI+ CGVHLTEEVHGIQNDVKGP V+YT FDQ D+L S DV+KS  QE SA 
Subjt:  MRKFPSSTSEYTWLVITSSPTFSTSLEMNDWNDVIVWFEVVKCPEVTVTIRSCGVHLTEEVHGIQNDVKGPRVIYTDFDQSDELSSWDVLKSLAQEASA-

Query:  TDWNAVYHAENFP
        +D NA+ HAENFP
Subjt:  TDWNAVYHAENFP

A0A1S3C0A4 LOW QUALITY PROTEIN: TMV resistance protein N-like1.4e-4381.42Show/hide
Query:  MRKFPSSTSEYTWLVITSSPTFSTSLEMNDWNDVIVWFEVVKCPEVTVTIRSCGVHLTEEVHGIQNDVKGPRVIYTDFDQSDELSSWDVLKSLAQEASA-
        MRKFPSSTSEYTWLV TSSPTFSTSLEMN+WN V VWFEVVKC EVTVTI+ CGVHLTEEVHGIQNDVKGP VIYT FDQ D+L S DV+KS AQE SA 
Subjt:  MRKFPSSTSEYTWLVITSSPTFSTSLEMNDWNDVIVWFEVVKCPEVTVTIRSCGVHLTEEVHGIQNDVKGPRVIYTDFDQSDELSSWDVLKSLAQEASA-

Query:  TDWNAVYHAENFP
        +D NA+ HAENFP
Subjt:  TDWNAVYHAENFP

A0A5A7VCN0 TMV resistance protein N-like1.4e-4381.42Show/hide
Query:  MRKFPSSTSEYTWLVITSSPTFSTSLEMNDWNDVIVWFEVVKCPEVTVTIRSCGVHLTEEVHGIQNDVKGPRVIYTDFDQSDELSSWDVLKSLAQEASA-
        MRKFPSSTSEYTWLV TSSPTFSTSLEMN+WN V VWFEVVKC EVTVTI+ CGVHLTEEVHGIQNDVKGP VIYT FDQ D+L S DV+KS AQE SA 
Subjt:  MRKFPSSTSEYTWLVITSSPTFSTSLEMNDWNDVIVWFEVVKCPEVTVTIRSCGVHLTEEVHGIQNDVKGPRVIYTDFDQSDELSSWDVLKSLAQEASA-

Query:  TDWNAVYHAENFP
        +D NA+ HAENFP
Subjt:  TDWNAVYHAENFP

A0A6J1G421 TMV resistance protein N-like isoform X11.9e-4070.31Show/hide
Query:  MRKFPSSTSEYTWLVITSSPTFSTSLEMNDWNDVIVWFEVVKCPEVTVTIRSCGVHLTEEVHGIQNDVKGPRVIYTDFDQSDELSSWDVLKSLAQEASA-
        MRKF  STSEYTWLV TSSPTFS+SL  NDWNDVIVWFEVVK  EV VTIRSCGVHLT+EV GIQND+KG  VIYTD+DQS EL SWDV+KS  QE SA 
Subjt:  MRKFPSSTSEYTWLVITSSPTFSTSLEMNDWNDVIVWFEVVKCPEVTVTIRSCGVHLTEEVHGIQNDVKGPRVIYTDFDQSDELSSWDVLKSLAQEASA-

Query:  TDWNAVYHAENFPGIKEDDIREEPYWNY
        +D NA+ HA+NFP   E D + +P  N+
Subjt:  TDWNAVYHAENFPGIKEDDIREEPYWNY

A0A6J1G4A0 TMV resistance protein N-like isoform X31.9e-4070.31Show/hide
Query:  MRKFPSSTSEYTWLVITSSPTFSTSLEMNDWNDVIVWFEVVKCPEVTVTIRSCGVHLTEEVHGIQNDVKGPRVIYTDFDQSDELSSWDVLKSLAQEASA-
        MRKF  STSEYTWLV TSSPTFS+SL  NDWNDVIVWFEVVK  EV VTIRSCGVHLT+EV GIQND+KG  VIYTD+DQS EL SWDV+KS  QE SA 
Subjt:  MRKFPSSTSEYTWLVITSSPTFSTSLEMNDWNDVIVWFEVVKCPEVTVTIRSCGVHLTEEVHGIQNDVKGPRVIYTDFDQSDELSSWDVLKSLAQEASA-

Query:  TDWNAVYHAENFPGIKEDDIREEPYWNY
        +D NA+ HA+NFP   E D + +P  N+
Subjt:  TDWNAVYHAENFPGIKEDDIREEPYWNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAAATTTCCATCATCAACATCAGAATATACATGGTTAGTAATAACTTCTTCTCCAACATTTAGTACTTCCTTGGAGATGAATGATTGGAATGATGTTATAGTCTG
GTTTGAGGTTGTGAAATGTCCTGAGGTCACTGTAACTATAAGAAGCTGTGGTGTTCATCTCACTGAAGAGGTCCATGGAATACAAAATGATGTCAAGGGGCCAAGGGTAA
TTTATACAGATTTTGATCAATCGGACGAATTGTCGAGCTGGGATGTTCTCAAATCCCTTGCTCAAGAAGCCTCCGCGACAGATTGGAATGCAGTGTATCATGCAGAAAAC
TTTCCAGGTATAAAAGAAGATGATATTAGAGAAGAGCCTTATTGGAATTACATACAAAAGATGTTAACATTTATGGAAGGGGAATTCTTTTGTTAG
mRNA sequenceShow/hide mRNA sequence
CCAAAGTTGGTTTATGAGAAAATTTCCATCATCAACATCAGAATATACATGGTTAGTAATAACTTCTTCTCCAACATTTAGTACTTCCTTGGAGATGAATGATTGGAATG
ATGTTATAGTCTGGTTTGAGGTTGTGAAATGTCCTGAGGTCACTGTAACTATAAGAAGCTGTGGTGTTCATCTCACTGAAGAGGTCCATGGAATACAAAATGATGTCAAG
GGGCCAAGGGTAATTTATACAGATTTTGATCAATCGGACGAATTGTCGAGCTGGGATGTTCTCAAATCCCTTGCTCAAGAAGCCTCCGCGACAGATTGGAATGCAGTGTA
TCATGCAGAAAACTTTCCAGGTATAAAAGAAGATGATATTAGAGAAGAGCCTTATTGGAATTACATACAAAAGATGTTAACATTTATGGAAGGGGAATTCTTTTGTTAG
Protein sequenceShow/hide protein sequence
MRKFPSSTSEYTWLVITSSPTFSTSLEMNDWNDVIVWFEVVKCPEVTVTIRSCGVHLTEEVHGIQNDVKGPRVIYTDFDQSDELSSWDVLKSLAQEASATDWNAVYHAEN
FPGIKEDDIREEPYWNYIQKMLTFMEGEFFC