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Lsi11G005120 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G005120
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTMV resistance protein N-like
Genome locationchr11:5429315..5433371
RNA-Seq ExpressionLsi11G005120
SyntenyLsi11G005120
Gene Ontology termsGO:0050896 - response to stimulus (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047972.1 TMV resistance protein N-like [Cucumis melo var. makuwa]4.6e-7962.93Show/hide
Query:  PFLPSKSEYMWLVTTSLARVSMEVQDWNKVLVWF---EAHDELNVSIRSYGVHVTEELHGIQTDLKWQVVNYADFYQLEKLQNLK---------------
        PFLPSKSEY+WLVTTSLA  S+EV DWNKVLVWF   EAH E+N +I   GVHVTEELHGIQ D+KW +VNYADFYQLEKLQ L                
Subjt:  PFLPSKSEYMWLVTTSLARVSMEVQDWNKVLVWF---EAHDELNVSIRSYGVHVTEELHGIQTDLKWQVVNYADFYQLEKLQNLK---------------

Query:  -SNCKAMLHA-SYDPEAMIESKIQPMIFPLHVTYNGCTMICGMEGMGDTALANSLCNKFNWMKDDA-------WREALDNSTSFLQVQGREPRSLSWSPL
         SN KAMLHA +YDPEA+I+S IQPMIFPLHVTYNG T+ICGMEGMGDT LANSLCNKF WMK+         + EALDNSTS   ++GRE +  SWS  
Subjt:  -SNCKAMLHA-SYDPEAMIESKIQPMIFPLHVTYNGCTMICGMEGMGDTALANSLCNKFNWMKDDA-------WREALDNSTSFLQVQGREPRSLSWSPL

Query:  P---KRGDGKRGANITSHTISSKRYYINF-ETENGKDIFEWITTQRWFTFNSGSYSRGN
            KRGDGKRG NIT+HTISSK Y + F E EN  DIF+W+ TQRW   +  S  RG+
Subjt:  P---KRGDGKRGANITSHTISSKRYYINF-ETENGKDIFEWITTQRWFTFNSGSYSRGN

KAE8651600.1 hypothetical protein Csa_023480 [Cucumis sativus]1.9e-7264.44Show/hide
Query:  PFLPSKSEYMWLVTTSLARVSMEVQDWNKVLVWF---EAHDELNVSIRSYGVHVTEELHGIQTDLKWQVVNYADFYQLEKLQNLK---------------
        PFLPSKSEYMWLVTTSLA  SMEV DWNKVLVWF   EAH E+N +I  YGVHVTEELH IQTD+KW +VNYADFYQLEKLQ+L                
Subjt:  PFLPSKSEYMWLVTTSLARVSMEVQDWNKVLVWF---EAHDELNVSIRSYGVHVTEELHGIQTDLKWQVVNYADFYQLEKLQNLK---------------

Query:  -SNCKAMLH-ASYDPEAMIESKIQPMIFPLHVTYNGCTMICGMEGMGDTALANSLCNKFNWMKDDA-WREALDNSTSFLQVQGREPRSLSWSPL--PKRG
         SN +AML+ A+YDPEA+I+S IQPMIFPLHVTYNG T ICGMEGMGDT LANSLCNKFNW  D+   REALDNSTSFL  +G +    SWS     KRG
Subjt:  -SNCKAMLH-ASYDPEAMIESKIQPMIFPLHVTYNGCTMICGMEGMGDTALANSLCNKFNWMKDDA-WREALDNSTSFLQVQGREPRSLSWSPL--PKRG

Query:  DGKRGANITSHTISSKRYYINFETENG-KDIFEWITTQR
        DG+RG NIT+ TISSKRY I F       D+F +  + R
Subjt:  DGKRGANITSHTISSKRYYINFETENG-KDIFEWITTQR

TYK18295.1 TMV resistance protein N-like [Cucumis melo var. makuwa]3.0e-7862.79Show/hide
Query:  PFLPSKSEYMWLVTTSLARVSMEVQDWNKVLVWF---EAHDELNVSIRSYGVHVTEELHGIQTDLKWQVVNYADFYQLEKLQNLK---------------
        PFLPSKSEYMWLVTTSLA  S+EV DWNKVLVWF   EAH E+N +I   GVHVTEELHGIQ D+KW +VNYADFYQLEKLQ+L                
Subjt:  PFLPSKSEYMWLVTTSLARVSMEVQDWNKVLVWF---EAHDELNVSIRSYGVHVTEELHGIQTDLKWQVVNYADFYQLEKLQNLK---------------

Query:  -SNCKAMLHA-SYDPEAMIESKIQPMIFPLHVTYNGCTMICGMEGMGDTALANSLCNKFNWMKDDA-------WREALDNSTSFLQVQGREPRSLSWS--
         SN KAMLHA +YDPEA+I+S IQPMIFPLHVTYNG T+ICGMEGMGDT LANSLCNKF WMKD         + EALDNSTSF  ++GR+ +  SWS  
Subjt:  -SNCKAMLHA-SYDPEAMIESKIQPMIFPLHVTYNGCTMICGMEGMGDTALANSLCNKFNWMKDDA-------WREALDNSTSFLQVQGREPRSLSWS--

Query:  PLPKRGDGKRGANITSHTISSKRYYINF-ETENGKDIFEWITTQRWFTFNSGSYSRGN
           KRGD  RG NI +HTISSK Y + F E EN  DIF+W+ TQRW   +  S  RG+
Subjt:  PLPKRGDGKRGANITSHTISSKRYYINF-ETENGKDIFEWITTQRWFTFNSGSYSRGN

TYK18305.1 TMV resistance protein N-like [Cucumis melo var. makuwa]1.3e-7862.55Show/hide
Query:  PFLPSKSEYMWLVTTSLARVSMEVQDWNKVLVWF---EAHDELNVSIRSYGVHVTEELHGIQTDLKWQVVNYADFYQLEKLQNLK---------------
        PFLPSKSEY+WLVTTSLA  S+EV DWNKVLVWF   EAH E+N +I   GVHVTEELHGIQ D+KW +VNYADFYQLEKLQ L                
Subjt:  PFLPSKSEYMWLVTTSLARVSMEVQDWNKVLVWF---EAHDELNVSIRSYGVHVTEELHGIQTDLKWQVVNYADFYQLEKLQNLK---------------

Query:  -SNCKAMLHA-SYDPEAMIESKIQPMIFPLHVTYNGCTMICGMEGMGDTALANSLCNKFNWMKDDA-------WREALDNSTSFLQVQGREPRSLSWSPL
         SN KAMLHA +YDPEA+I+S IQP+IFPLHVTYNG T+ICGMEGMGDT LANSLCNKF WMK+         + EALDNSTS   ++GRE +  SWS  
Subjt:  -SNCKAMLHA-SYDPEAMIESKIQPMIFPLHVTYNGCTMICGMEGMGDTALANSLCNKFNWMKDDA-------WREALDNSTSFLQVQGREPRSLSWSPL

Query:  P---KRGDGKRGANITSHTISSKRYYINF-ETENGKDIFEWITTQRWFTFNSGSYSRGN
            KRGDGKRG NIT+HTISSK Y + F E EN  DIF+W+ TQRW   +  S  RG+
Subjt:  P---KRGDGKRGANITSHTISSKRYYINF-ETENGKDIFEWITTQRWFTFNSGSYSRGN

XP_038877835.1 LOW QUALITY PROTEIN: TMV resistance protein N-like [Benincasa hispida]1.8e-8363.02Show/hide
Query:  PFLPSKSEYMWLVTTSLARVSMEVQDWNKVLVWFEAHD---ELNVSIRSYGVHVTEELHGIQTDLKWQVVNYADFYQLEKLQNL----------------
        PFLPSKSEYMWLVTTSLA  SMEVQDWNKVLV FE H+   E+NV+IRSYG+HVTEELHG+QTDLKW VVNYADFYQ+EKLQNL                
Subjt:  PFLPSKSEYMWLVTTSLARVSMEVQDWNKVLVWFEAHD---ELNVSIRSYGVHVTEELHGIQTDLKWQVVNYADFYQLEKLQNL----------------

Query:  KSNCKAMLHA-SYDPEAMIESKIQPMIFPLHVTYNGCTMICGMEGMGDTALANSLCNKFNWMKDDAWREALDNSTSFLQVQGREPRSLSWSPLPKRGDGK
        K +CKAMLHA SYDPEA+I+S IQPMIFPLHVTYNG T ICGMEGMGDTALANSLCNKF W+KD  +REALD  TSF +V+G +PRSL WS   KRGDG+
Subjt:  KSNCKAMLHA-SYDPEAMIESKIQPMIFPLHVTYNGCTMICGMEGMGDTALANSLCNKFNWMKDDAWREALDNSTSFLQVQGREPRSLSWSPLPKRGDGK

Query:  RGANITSHTISSKRYYINFETENGK---DIFEWITTQR--WFTFN---SGSYSRGNANCVCNIET
        RG ++ SHTISSKRY I F   + +   D +EW+ T +  W + +   S S+ R  +  +  ++T
Subjt:  RGANITSHTISSKRYYINFETENGK---DIFEWITTQR--WFTFN---SGSYSRGNANCVCNIET

TrEMBL top hitse value%identityAlignment
A0A0A0LJM0 TIR domain-containing protein9.1e-7364.44Show/hide
Query:  PFLPSKSEYMWLVTTSLARVSMEVQDWNKVLVWF---EAHDELNVSIRSYGVHVTEELHGIQTDLKWQVVNYADFYQLEKLQNLK---------------
        PFLPSKSEYMWLVTTSLA  SMEV DWNKVLVWF   EAH E+N +I  YGVHVTEELH IQTD+KW +VNYADFYQLEKLQ+L                
Subjt:  PFLPSKSEYMWLVTTSLARVSMEVQDWNKVLVWF---EAHDELNVSIRSYGVHVTEELHGIQTDLKWQVVNYADFYQLEKLQNLK---------------

Query:  -SNCKAMLH-ASYDPEAMIESKIQPMIFPLHVTYNGCTMICGMEGMGDTALANSLCNKFNWMKDDA-WREALDNSTSFLQVQGREPRSLSWSPL--PKRG
         SN +AML+ A+YDPEA+I+S IQPMIFPLHVTYNG T ICGMEGMGDT LANSLCNKFNW  D+   REALDNSTSFL  +G +    SWS     KRG
Subjt:  -SNCKAMLH-ASYDPEAMIESKIQPMIFPLHVTYNGCTMICGMEGMGDTALANSLCNKFNWMKDDA-WREALDNSTSFLQVQGREPRSLSWSPL--PKRG

Query:  DGKRGANITSHTISSKRYYINFETENG-KDIFEWITTQR
        DG+RG NIT+ TISSKRY I F       D+F +  + R
Subjt:  DGKRGANITSHTISSKRYYINFETENG-KDIFEWITTQR

A0A1S3BZ02 LOW QUALITY PROTEIN: disease resistance protein RPP4-like1.6e-6960.41Show/hide
Query:  SKSEYMWLVTTSLARVSMEVQDWNKVLVWFE---AHDELNVSIRSYGVHVTEELHGIQTDLKWQVVNYADFYQLEKLQNLK----------------SNC
        SK EYMWL+TTSLA  SMEVQDWNKVLVWFE   A DE+ VSIR  GVHVTEELHGIQTD+KW VVNYADFYQ+EKLQNL                 SN 
Subjt:  SKSEYMWLVTTSLARVSMEVQDWNKVLVWFE---AHDELNVSIRSYGVHVTEELHGIQTDLKWQVVNYADFYQLEKLQNLK----------------SNC

Query:  KAMLH-ASYDPEAMIESKIQPMIFPLHVTYNGCTMICGMEGMGDTALANSLCNKFNWMKDDAWREALDNSTSFLQVQGREPRSLSW-SPLPKRGDGKRGA
        +AMLH ASYDPEA+++S IQPM+FPLH+TYNG T+I GMEGMG+T +AN LCNKFNW+K   +REALDNSTS   V+GR+   LS+ SP       K G 
Subjt:  KAMLH-ASYDPEAMIESKIQPMIFPLHVTYNGCTMICGMEGMGDTALANSLCNKFNWMKDDAWREALDNSTSFLQVQGREPRSLSW-SPLPKRGDGKRGA

Query:  NITSHTISSKRYYINFET---ENGKDIFEWITTQ-RWFTFNSGSY
        NIT+HT+SSK YYI FE       +++  W+  Q RW  F+ GS+
Subjt:  NITSHTISSKRYYINFET---ENGKDIFEWITTQ-RWFTFNSGSY

A0A5A7TWU2 TMV resistance protein N-like2.2e-7962.93Show/hide
Query:  PFLPSKSEYMWLVTTSLARVSMEVQDWNKVLVWF---EAHDELNVSIRSYGVHVTEELHGIQTDLKWQVVNYADFYQLEKLQNLK---------------
        PFLPSKSEY+WLVTTSLA  S+EV DWNKVLVWF   EAH E+N +I   GVHVTEELHGIQ D+KW +VNYADFYQLEKLQ L                
Subjt:  PFLPSKSEYMWLVTTSLARVSMEVQDWNKVLVWF---EAHDELNVSIRSYGVHVTEELHGIQTDLKWQVVNYADFYQLEKLQNLK---------------

Query:  -SNCKAMLHA-SYDPEAMIESKIQPMIFPLHVTYNGCTMICGMEGMGDTALANSLCNKFNWMKDDA-------WREALDNSTSFLQVQGREPRSLSWSPL
         SN KAMLHA +YDPEA+I+S IQPMIFPLHVTYNG T+ICGMEGMGDT LANSLCNKF WMK+         + EALDNSTS   ++GRE +  SWS  
Subjt:  -SNCKAMLHA-SYDPEAMIESKIQPMIFPLHVTYNGCTMICGMEGMGDTALANSLCNKFNWMKDDA-------WREALDNSTSFLQVQGREPRSLSWSPL

Query:  P---KRGDGKRGANITSHTISSKRYYINF-ETENGKDIFEWITTQRWFTFNSGSYSRGN
            KRGDGKRG NIT+HTISSK Y + F E EN  DIF+W+ TQRW   +  S  RG+
Subjt:  P---KRGDGKRGANITSHTISSKRYYINF-ETENGKDIFEWITTQRWFTFNSGSYSRGN

A0A5D3D427 TMV resistance protein N-like1.4e-7862.79Show/hide
Query:  PFLPSKSEYMWLVTTSLARVSMEVQDWNKVLVWF---EAHDELNVSIRSYGVHVTEELHGIQTDLKWQVVNYADFYQLEKLQNLK---------------
        PFLPSKSEYMWLVTTSLA  S+EV DWNKVLVWF   EAH E+N +I   GVHVTEELHGIQ D+KW +VNYADFYQLEKLQ+L                
Subjt:  PFLPSKSEYMWLVTTSLARVSMEVQDWNKVLVWF---EAHDELNVSIRSYGVHVTEELHGIQTDLKWQVVNYADFYQLEKLQNLK---------------

Query:  -SNCKAMLHA-SYDPEAMIESKIQPMIFPLHVTYNGCTMICGMEGMGDTALANSLCNKFNWMKDDA-------WREALDNSTSFLQVQGREPRSLSWS--
         SN KAMLHA +YDPEA+I+S IQPMIFPLHVTYNG T+ICGMEGMGDT LANSLCNKF WMKD         + EALDNSTSF  ++GR+ +  SWS  
Subjt:  -SNCKAMLHA-SYDPEAMIESKIQPMIFPLHVTYNGCTMICGMEGMGDTALANSLCNKFNWMKDDA-------WREALDNSTSFLQVQGREPRSLSWS--

Query:  PLPKRGDGKRGANITSHTISSKRYYINF-ETENGKDIFEWITTQRWFTFNSGSYSRGN
           KRGD  RG NI +HTISSK Y + F E EN  DIF+W+ TQRW   +  S  RG+
Subjt:  PLPKRGDGKRGANITSHTISSKRYYINF-ETENGKDIFEWITTQRWFTFNSGSYSRGN

A0A5D3D437 TMV resistance protein N-like6.5e-7962.55Show/hide
Query:  PFLPSKSEYMWLVTTSLARVSMEVQDWNKVLVWF---EAHDELNVSIRSYGVHVTEELHGIQTDLKWQVVNYADFYQLEKLQNLK---------------
        PFLPSKSEY+WLVTTSLA  S+EV DWNKVLVWF   EAH E+N +I   GVHVTEELHGIQ D+KW +VNYADFYQLEKLQ L                
Subjt:  PFLPSKSEYMWLVTTSLARVSMEVQDWNKVLVWF---EAHDELNVSIRSYGVHVTEELHGIQTDLKWQVVNYADFYQLEKLQNLK---------------

Query:  -SNCKAMLHA-SYDPEAMIESKIQPMIFPLHVTYNGCTMICGMEGMGDTALANSLCNKFNWMKDDA-------WREALDNSTSFLQVQGREPRSLSWSPL
         SN KAMLHA +YDPEA+I+S IQP+IFPLHVTYNG T+ICGMEGMGDT LANSLCNKF WMK+         + EALDNSTS   ++GRE +  SWS  
Subjt:  -SNCKAMLHA-SYDPEAMIESKIQPMIFPLHVTYNGCTMICGMEGMGDTALANSLCNKFNWMKDDA-------WREALDNSTSFLQVQGREPRSLSWSPL

Query:  P---KRGDGKRGANITSHTISSKRYYINF-ETENGKDIFEWITTQRWFTFNSGSYSRGN
            KRGDGKRG NIT+HTISSK Y + F E EN  DIF+W+ TQRW   +  S  RG+
Subjt:  P---KRGDGKRGANITSHTISSKRYYINF-ETENGKDIFEWITTQRWFTFNSGSYSRGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCATTTCTTCCATCAAAATCAGAATATATGTGGTTAGTAACAACTTCTCTAGCAAGGGTCTCCATGGAGGTGCAGGACTGGAATAAAGTTTTGGTCTGGTTTGA
AGCACATGATGAGCTTAATGTAAGTATAAGAAGCTATGGTGTCCATGTCACTGAAGAGCTCCATGGGATACAAACAGATCTCAAGTGGCAGGTGGTAAATTATGCTGATT
TTTATCAACTGGAGAAATTGCAAAATCTCAAGTCAAATTGCAAAGCAATGTTGCATGCAAGTTATGATCCAGAAGCAATGATTGAGTCCAAGATTCAACCTATGATTTTT
CCTTTGCACGTAACATATAATGGTTGTACAATGATATGTGGAATGGAAGGCATGGGAGACACTGCACTTGCCAATTCTTTGTGCAACAAATTTAATTGGATGAAAGACGA
CGCTTGGAGAGAAGCTTTAGATAATTCTACAAGCTTTTTACAAGTCCAAGGAAGAGAGCCCCGTAGCTTATCCTGGTCGCCCCTCCCTAAGCGTGGAGATGGTAAAAGAG
GAGCCAATATCACAAGCCATACAATATCCTCCAAAAGGTATTACATAAACTTTGAAACTGAGAACGGTAAGGATATATTTGAGTGGATTACTACACAGCGTTGGTTTACA
TTTAATTCTGGCAGTTATTCTCGAGGAAATGCTAATTGTGTTTGCAATATAGAAACAGGAGCCATAAACTTCTGTGTAATGAATTCCATCCCAATTGATGTACTTCGAGC
TACGCACCCTGACTTAACAAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACCATTTCTTCCATCAAAATCAGAATATATGTGGTTAGTAACAACTTCTCTAGCAAGGGTCTCCATGGAGGTGCAGGACTGGAATAAAGTTTTGGTCTGGTTTGA
AGCACATGATGAGCTTAATGTAAGTATAAGAAGCTATGGTGTCCATGTCACTGAAGAGCTCCATGGGATACAAACAGATCTCAAGTGGCAGGTGGTAAATTATGCTGATT
TTTATCAACTGGAGAAATTGCAAAATCTCAAGTCAAATTGCAAAGCAATGTTGCATGCAAGTTATGATCCAGAAGCAATGATTGAGTCCAAGATTCAACCTATGATTTTT
CCTTTGCACGTAACATATAATGGTTGTACAATGATATGTGGAATGGAAGGCATGGGAGACACTGCACTTGCCAATTCTTTGTGCAACAAATTTAATTGGATGAAAGACGA
CGCTTGGAGAGAAGCTTTAGATAATTCTACAAGCTTTTTACAAGTCCAAGGAAGAGAGCCCCGTAGCTTATCCTGGTCGCCCCTCCCTAAGCGTGGAGATGGTAAAAGAG
GAGCCAATATCACAAGCCATACAATATCCTCCAAAAGGTATTACATAAACTTTGAAACTGAGAACGGTAAGGATATATTTGAGTGGATTACTACACAGCGTTGGTTTACA
TTTAATTCTGGCAGTTATTCTCGAGGAAATGCTAATTGTGTTTGCAATATAGAAACAGGAGCCATAAACTTCTGTGTAATGAATTCCATCCCAATTGATGTACTTCGAGC
TACGCACCCTGACTTAACAAAGTAG
Protein sequenceShow/hide protein sequence
MEPFLPSKSEYMWLVTTSLARVSMEVQDWNKVLVWFEAHDELNVSIRSYGVHVTEELHGIQTDLKWQVVNYADFYQLEKLQNLKSNCKAMLHASYDPEAMIESKIQPMIF
PLHVTYNGCTMICGMEGMGDTALANSLCNKFNWMKDDAWREALDNSTSFLQVQGREPRSLSWSPLPKRGDGKRGANITSHTISSKRYYINFETENGKDIFEWITTQRWFT
FNSGSYSRGNANCVCNIETGAINFCVMNSIPIDVLRATHPDLTK