CuGenDBv2

Gene ID	Lsi11G005270
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	ATP synthase subunit a
Genome location	chr11:5569297..5569591
RNA-Seq Expression	Lsi11G005270
Synteny	Lsi11G005270
Gene Ontology terms	GO:0015986 - ATP synthesis coupled proton transport (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) (cellular component) GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domains	IPR045083 - ATP synthase, F0 complex, subunit A, bacterial/mitochondria

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008236536.1 PREDICTED: ATP synthase subunit a [Prunus mume]

2.0e-19

94.23

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Query:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV
        ELIYDFVPNLVN+QIGGLSGNVKQ+FFPRISVTFTFSLFRNPQGMIPYSF+V
Subjt:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV

YP_009241666.1 ATPase subunit 6 [Ziziphus jujuba]

2.0e-19

94.23

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Query:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV
        ELIYDFVPNLVN+QIGGLSGNVKQ+FFPRISVTFTFSLFRNPQGMIPYSF+V
Subjt:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV

YP_009694653.1 ATP synthase F0 subunit 6 [Prunus avium]

2.0e-19

94.23

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Query:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV
        ELIYDFVPNLVN+QIGGLSGNVKQ+FFPRISVTFTFSLFRNPQGMIPYSF+V
Subjt:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV

YP_009913611.1 ATPase subunit 6 [Luffa acutangula]

2.0e-19

94.23

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Query:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV
        ELIYDFVPNLVN+QIGGLSGNVKQ+FFPRISVTFTFSLFRNPQGMIPYSF+V
Subjt:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV

YP_009941511.1 ATP synthase subunit 6 [Fagus sylvatica]

2.0e-19

94.23

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Query:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV
        ELIYDFVPNLVN+QIGGLSGNVKQ+FFPRISVTFTFSLFRNPQGMIPYSF+V
Subjt:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV

TrEMBL top hits

e value

%identity

Alignment

A0A142BZ05 ATP synthase subunit a

9.9e-20

94.23

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Query:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV
        ELIYDFVPNLVN+QIGGLSGNVKQ+FFPRISVTFTFSLFRNPQGMIPYSF+V
Subjt:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV

A0A5C1J153 ATP synthase subunit a

9.9e-20

94.23

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Query:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV
        ELIYDFVPNLVN+QIGGLSGNVKQ+FFPRISVTFTFSLFRNPQGMIPYSF+V
Subjt:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV

A0A7D6C7D9 ATP synthase subunit a

9.9e-20

94.23

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Query:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV
        ELIYDFVPNLVN+QIGGLSGNVKQ+FFPRISVTFTFSLFRNPQGMIPYSF+V
Subjt:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV

A0A7G3UT49 ATP synthase subunit a (Fragment)

2.9e-19

92.31

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Query:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV
        ELIYDFVPNLVN+QIGGLSGNVKQ+FFPRISVTFTFSLFRNPQGMIP+SF+V
Subjt:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV

A0A7L7T791 ATP synthase subunit a

9.9e-20

94.23

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Query:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV
        ELIYDFVPNLVN+QIGGLSGNVKQ+FFPRISVTFTFSLFRNPQGMIPYSF+V
Subjt:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV

SwissProt top hits

e value

%identity

Alignment

P05499 ATP synthase subunit a

1.8e-18

86.54

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Query:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV
        ELIYDFV N VN+QIGGLSGNVKQ+F PRISVTFTFSLF NPQGMIPYSF+V
Subjt:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV

P07925 ATP synthase subunit a

2.5e-20

88.46

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Query:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV
        ELIYDFVPNLVN+QIGGLSGNVK +FFP ISVTFTFSLFRNPQGMIP+SF+V
Subjt:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV

P68526 ATP synthase subunit a

1.1e-20

90.38

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Query:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV
        ELIYDFV NLVN+QIGGLSGNVKQ+FFPRISVTFTFSLFRNPQGMIP+SF+V
Subjt:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV

P68527 ATP synthase subunit a

1.1e-20

90.38

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Query:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV
        ELIYDFV NLVN+QIGGLSGNVKQ+FFPRISVTFTFSLFRNPQGMIP+SF+V
Subjt:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV

Q04654 ATP synthase subunit a

8.9e-18

84.62

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Query:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV
        ELIYDFVPNLVN+QIGGLSGNVKQ+FFP I VTFTF LF N QGMIPYSF+V
Subjt:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV

Arabidopsis top hits

e value

%identity

Alignment

AT2G07741.1 ATPase, F0 complex, subunit A protein

6.6e-16

76.92

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Query:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV
        EL+YDFV NLV +QIGGLSGNVKQ FFP I VTF F LF N QGMIPYSF+V
Subjt:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV

ATMG00410.1 ATPase subunit 6-1

6.6e-16

76.92

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Query:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV
        EL+YDFV NLV +QIGGLSGNVKQ FFP I VTF F LF N QGMIPYSF+V
Subjt:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV

ATMG01170.1 ATPase, F0 complex, subunit A protein

6.6e-16

76.92

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Query:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV
        EL+YDFV NLV +QIGGLSGNVKQ FFP I VTF F LF N QGMIPYSF+V
Subjt:  ELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSV

Sequences

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CDS sequence

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AAATTTTTATTTCTCATTCACAAATCCATCTTTGTTTGTGCTGCTAACTCTCAGATTAGTCCTACTTCTGAGCTTATATATGATTTTGTGCCGAACCTAGTAAACAAACA
AATAGGTGGTCTTTCTGGAAATGTTAAACAAAGGTTTTTCCCTCGCATCTCGGTCACTTTTACTTTTTCATTATTTCGTAATCCCCAGGGTATGATACCTTATAGCTTCT
CAGTAGAGTAC

mRNA sequence

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Protein sequence

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KFLFLIHKSIFVCAANSQISPTSELIYDFVPNLVNKQIGGLSGNVKQRFFPRISVTFTFSLFRNPQGMIPYSFSVEY

Lsi11G005270 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome