; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G005300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G005300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRING-type domain-containing protein
Genome locationchr11:5582350..5586387
RNA-Seq ExpressionLsi11G005300
SyntenyLsi11G005300
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR018957 - Zinc finger, C3HC4 RING-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030255.1 E3 ubiquitin-protein ligase Topors [Cucurbita argyrosperma subsp. argyrosperma]6.7e-12983.64Show/hide
Query:  MELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDS
        MELQ TAP+E+ TSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTES SIIHGLDGHCFQRHYVN+DFQDS
Subjt:  MELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDS

Query:  FILSKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQDQIVGWKGTKLSIPHSYVLL---RYQTETPELKREKFSHVIL
        FILSKA KYRLQCYYTEPGFLDDIF VK+YWKLRKYLQANQWLEVWLKRELQALIQ +D  +       SI HS+      RYQTETP+LKRE+F+ +IL
Subjt:  FILSKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQDQIVGWKGTKLSIPHSYVLL---RYQTETPELKREKFSHVIL

Query:  DAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD
        DAAKPFLS RADRFVLELELFLASGLNIEAYDSVYLQRLGWN+PV PS+A+ E+LG +PVTPYL+IF+YDPDDGD
Subjt:  DAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD

XP_022150768.1 uncharacterized protein LOC111018833 [Momordica charantia]3.9e-12983.15Show/hide
Query:  MSERAMELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNR
        MSE AMELQSTA  E+ T+SSS DDTNPCPICLG II+PSYLDKCFHKFCYNCIVQWTKVVSGK SC LS IKCPLCKTESSSIIHGLDGHCFQRHYVN+
Subjt:  MSERAMELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNR

Query:  DFQDSFILSKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQD-QIVGWKGTKLSIP-HSYVLLRYQTETPELKREKFS
        DFQDSFILSKAHKYRLQCYYTEPGFL+DIF+V+RYWKLRKYLQANQWLEVWLKRELQALIQ +D  I+      L  P  S    +YQTE+PE+K+EKFS
Subjt:  DFQDSFILSKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQD-QIVGWKGTKLSIP-HSYVLLRYQTETPELKREKFS

Query:  HVILDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD
         ++ DAAKPFLSARADRFV ELELFLASGLNIEAYDSVYLQRLGW+EPVVPSVAIKEDLGLKPVTPYLYIF+YDPDDG+
Subjt:  HVILDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD

XP_022946760.1 uncharacterized protein LOC111450733 [Cucurbita moschata]5.1e-12983.64Show/hide
Query:  MELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDS
        MELQ TAP+E+ TSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTES SIIHGLDGHCFQRHYVN+DFQDS
Subjt:  MELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDS

Query:  FILSKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQDQIVGWKGTKLSIPHSYVLL---RYQTETPELKREKFSHVIL
        FILSKA KYRLQCYYTEPGFLDDIF V++YWKLRKYLQANQWLEVWLKRELQALIQ +D  +       SI HS+      RYQTETP+LKRE+F+ +IL
Subjt:  FILSKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQDQIVGWKGTKLSIPHSYVLL---RYQTETPELKREKFSHVIL

Query:  DAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD
        DAAKPFLS RADRFVLELELFLASGLNIEAYDSVYLQRLGWN+PV PS+A+ EDLG +PVTPYL+IF+YDPDDGD
Subjt:  DAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD

XP_022999126.1 uncharacterized protein LOC111493604 [Cucurbita maxima]5.1e-12983.27Show/hide
Query:  MELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDS
        MELQ TAP+E+ TSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTES SIIHGLDGHCFQRHYVN+DFQDS
Subjt:  MELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDS

Query:  FILSKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQDQIVGWKGTKLSIPHSYVLL---RYQTETPELKREKFSHVIL
        FILSKA KYRLQCYYTEPGFLDDIF+V++YWKLRKYLQANQWLEVWLKRELQALIQ +D  +       SI HS+      RYQTETP+LKR++F+ +IL
Subjt:  FILSKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQDQIVGWKGTKLSIPHSYVLL---RYQTETPELKREKFSHVIL

Query:  DAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD
        DAAKPFLS RADRFVLELELFLASGLNIEAYDSVYLQRLGWN+P  PS+A+ EDLGL+PVTPYL+IF+YDPDDGD
Subjt:  DAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD

XP_038889020.1 uncharacterized protein LOC120078783 isoform X1 [Benincasa hispida]5.3e-13485.05Show/hide
Query:  MSERAMELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNR
        MSERAMELQSTAP+E  TSSS SDDTNPCPICLG IIQPSYLDKCFHKFCYNCI+QWTKVVSGKHSC LSSIKCPLCKTESSSIIHGLDGHC QRHYVNR
Subjt:  MSERAMELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNR

Query:  DFQDSFILSKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQD------QIVGWKGTKLSIPHSYVLLRYQTETPELKR
        DFQDSFILSKAHKYRLQCYYTEPGFLDDIF+V+RYWKLRKYLQANQWLEVWLKRELQALIQ +D       ++G+  +  S        RYQTETPELKR
Subjt:  DFQDSFILSKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQD------QIVGWKGTKLSIPHSYVLLRYQTETPELKR

Query:  EKFSHVILDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDD
        E F+ ++LDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVP +AIKEDLGLKPVTPYLYIFEYDPDD
Subjt:  EKFSHVILDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDD

TrEMBL top hitse value%identityAlignment
A0A0A0LLN5 RING-type domain-containing protein3.7e-12578.75Show/hide
Query:  MSERAMELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNR
        MS ++MELQSTA ME+ T +S+SD TNPCPICLGPI Q SYLDKCFH FCYNCIVQWTKVVSGK SCTLSSIKCPLCKTESSSIIHGLDGH FQRHYVN 
Subjt:  MSERAMELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNR

Query:  DFQDSFILSKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQDQIVGWKGTKLSIPHSYVLL----------RYQTETP
        DFQDSFILSKAH+YRLQCYYTEPGFL+DIFDV+RYWKL+KYLQANQWLEVWLKRELQALIQ +D  +        I H ++ L           YQTETP
Subjt:  DFQDSFILSKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQDQIVGWKGTKLSIPHSYVLL----------RYQTETP

Query:  ELKREKFSHVILDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD
        ELKR++FS  ILDAAKPFLSARADRF+LELELFLASGLNIEAYDSVYLQRLGWN+P+VPSVA +EDLGLK VTPYLYIF+ DPDDGD
Subjt:  ELKREKFSHVILDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD

A0A5D3D454 RING zinc finger protein-like protein1.2e-12379.3Show/hide
Query:  MSERAMELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNR
        MSE++MELQS A MEI TS+S+SD T+PCPICLGPI Q SYLDKCFH FCYNCIVQWTKVVSGK SC LSSIKCPLCKTESSSIIHGLDGH FQRHYVN 
Subjt:  MSERAMELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNR

Query:  DFQDSFILSKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQDQIVGWKGTKLSIPHSYVLL----------RYQTETP
        DFQDSFILSKAHKYRLQCYYTEPGFL+DIFDV+RYWKL+KYLQANQWLEVWLKRELQALIQ +D  +        I H +V L          +YQTETP
Subjt:  DFQDSFILSKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQDQIVGWKGTKLSIPHSYVLL----------RYQTETP

Query:  ELKREKFSHVILDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDD
        ELKR++FS  ILDAAKPFLSARADRF+LELELFLASGLNIEAYDSVYLQRLGWNEP+V SVA +EDLGLK VTPYLYIF+ DPDD
Subjt:  ELKREKFSHVILDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDD

A0A6J1DAB4 uncharacterized protein LOC1110188331.9e-12983.15Show/hide
Query:  MSERAMELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNR
        MSE AMELQSTA  E+ T+SSS DDTNPCPICLG II+PSYLDKCFHKFCYNCIVQWTKVVSGK SC LS IKCPLCKTESSSIIHGLDGHCFQRHYVN+
Subjt:  MSERAMELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNR

Query:  DFQDSFILSKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQD-QIVGWKGTKLSIP-HSYVLLRYQTETPELKREKFS
        DFQDSFILSKAHKYRLQCYYTEPGFL+DIF+V+RYWKLRKYLQANQWLEVWLKRELQALIQ +D  I+      L  P  S    +YQTE+PE+K+EKFS
Subjt:  DFQDSFILSKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQD-QIVGWKGTKLSIP-HSYVLLRYQTETPELKREKFS

Query:  HVILDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD
         ++ DAAKPFLSARADRFV ELELFLASGLNIEAYDSVYLQRLGW+EPVVPSVAIKEDLGLKPVTPYLYIF+YDPDDG+
Subjt:  HVILDAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD

A0A6J1G4Z2 uncharacterized protein LOC1114507332.5e-12983.64Show/hide
Query:  MELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDS
        MELQ TAP+E+ TSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTES SIIHGLDGHCFQRHYVN+DFQDS
Subjt:  MELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDS

Query:  FILSKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQDQIVGWKGTKLSIPHSYVLL---RYQTETPELKREKFSHVIL
        FILSKA KYRLQCYYTEPGFLDDIF V++YWKLRKYLQANQWLEVWLKRELQALIQ +D  +       SI HS+      RYQTETP+LKRE+F+ +IL
Subjt:  FILSKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQDQIVGWKGTKLSIPHSYVLL---RYQTETPELKREKFSHVIL

Query:  DAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD
        DAAKPFLS RADRFVLELELFLASGLNIEAYDSVYLQRLGWN+PV PS+A+ EDLG +PVTPYL+IF+YDPDDGD
Subjt:  DAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD

A0A6J1KC78 uncharacterized protein LOC1114936042.5e-12983.27Show/hide
Query:  MELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDS
        MELQ TAP+E+ TSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTES SIIHGLDGHCFQRHYVN+DFQDS
Subjt:  MELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDS

Query:  FILSKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQDQIVGWKGTKLSIPHSYVLL---RYQTETPELKREKFSHVIL
        FILSKA KYRLQCYYTEPGFLDDIF+V++YWKLRKYLQANQWLEVWLKRELQALIQ +D  +       SI HS+      RYQTETP+LKR++F+ +IL
Subjt:  FILSKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQDQIVGWKGTKLSIPHSYVLL---RYQTETPELKREKFSHVIL

Query:  DAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD
        DAAKPFLS RADRFVLELELFLASGLNIEAYDSVYLQRLGWN+P  PS+A+ EDLGL+PVTPYL+IF+YDPDDGD
Subjt:  DAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD

SwissProt top hitse value%identityAlignment
P29129 E3 ubiquitin-protein ligase ICP01.7e-0539.34Show/hide
Query:  CPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLD
        CPICL      +    C HKFC +CI +W          TL+S  CPLC    +SI+H +D
Subjt:  CPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLD

Q80Z37 E3 ubiquitin-protein ligase Topors2.9e-1032.14Show/hide
Query:  TAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNR-DFQDSFILS
        T+ ++ T  + +S D+  CPICL      SYLD+C HKFC+ C+ +W+K          +  +CPLCK    SI H +      + YV R  +  SF   
Subjt:  TAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNR-DFQDSFILS

Query:  KAHKYRLQCYYT
        +  ++R +   T
Subjt:  KAHKYRLQCYYT

Q9E1W2 E3 ubiquitin-protein ligase IE611.7e-0532.94Show/hide
Query:  PMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHY
        P   T++S S   T  C IC+  I        C H FC+ CI  WT           +S +CPLC+T  SSI+H +        Y
Subjt:  PMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHY

Q9NS56 E3 ubiquitin-protein ligase Topors5.0e-1030.63Show/hide
Query:  TAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSK
        T+ ++ T  + +S D+  CPICL      SYLD+C HKFC+ C+ +W+K          +  +CPLCK    SI H +      + YV R   +   ++ 
Subjt:  TAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSK

Query:  AHKYRLQCYYT
          ++R +   T
Subjt:  AHKYRLQCYYT

Arabidopsis top hitse value%identityAlignment
AT3G05250.1 RING/U-box superfamily protein1.2e-7050.72Show/hide
Query:  APMEITTSSSSSD---DTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFIL
        A  EI   S S D   D +PCPICLG  ++ SYLD CFHKFC+NCI QW KVVS K S   SS+ CPLCKTE+ SIIH  DG  F+RHY++ +  D F+L
Subjt:  APMEITTSSSSSD---DTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFIL

Query:  SKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQDQIVGWKGTKLSIPHSY---VLLRYQTETPELK---REKFSHVIL
        +K  +YRLQCYYTE GFL D+FDV R+WKL+K+LQ N+ LE WL+RELQAL+Q +D  +      + +  S+   +  R + ET   +   +E+F  V+ 
Subjt:  SKAHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQDQIVGWKGTKLSIPHSY---VLLRYQTETPELK---REKFSHVIL

Query:  DAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKP------VTPYLYIFEYDPD
        +AA+PF+ AR DRFV ELELFLA+GLN+EAYD++Y Q L  N       A +E   ++       VTPYL+IFE D D
Subjt:  DAAKPFLSARADRFVLELELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKP------VTPYLYIFEYDPD

AT3G05670.1 RING/U-box protein9.3e-0437.7Show/hide
Query:  NPCPICLGPIIQ---PSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSI
        N C ICL           LD C H FC+ CI++W+KV S          +CPLCK    +I
Subjt:  NPCPICLGPIIQ---PSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGAAAGGGCCATGGAACTGCAGAGCACGGCGCCAATGGAGATAACGACGAGCAGTTCCTCTTCCGACGATACGAACCCTTGCCCGATCTGCCTCGGACCCATAAT
TCAACCTTCCTATCTCGATAAATGCTTCCATAAATTTTGTTACAATTGCATTGTACAATGGACCAAAGTGGTTTCTGGGAAGCACTCCTGCACACTTTCGTCCATTAAAT
GTCCTTTATGCAAGACAGAAAGTTCTTCTATAATACATGGATTAGATGGACACTGTTTCCAAAGACATTATGTTAATCGGGATTTTCAGGATAGCTTTATCTTATCAAAA
GCTCACAAGTATAGATTACAATGCTATTATACTGAACCAGGTTTCTTGGATGACATATTTGATGTAAAGAGGTACTGGAAGTTACGGAAGTATCTCCAGGCAAACCAGTG
GCTTGAAGTTTGGTTGAAAAGGGAACTTCAAGCTTTGATTCAGAGTCAAGACCAAATAGTTGGGTGGAAAGGGACAAAGCTCTCCATTCCTCATTCCTACGTTCTCCTAC
GGTATCAAACAGAAACTCCTGAACTGAAGAGAGAAAAGTTTAGCCACGTGATCCTTGATGCAGCAAAGCCATTCCTGTCAGCAAGAGCAGACCGATTCGTGCTCGAGTTG
GAGCTGTTTCTTGCTTCGGGTTTGAACATCGAAGCCTATGATTCGGTTTACTTGCAACGGTTAGGCTGGAACGAGCCTGTAGTCCCAAGTGTGGCTATCAAAGAAGATCT
TGGACTCAAACCTGTAACTCCATACTTGTATATCTTTGAATATGACCCTGATGATGGTGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGAAAGGGCCATGGAACTGCAGAGCACGGCGCCAATGGAGATAACGACGAGCAGTTCCTCTTCCGACGATACGAACCCTTGCCCGATCTGCCTCGGACCCATAAT
TCAACCTTCCTATCTCGATAAATGCTTCCATAAATTTTGTTACAATTGCATTGTACAATGGACCAAAGTGGTTTCTGGGAAGCACTCCTGCACACTTTCGTCCATTAAAT
GTCCTTTATGCAAGACAGAAAGTTCTTCTATAATACATGGATTAGATGGACACTGTTTCCAAAGACATTATGTTAATCGGGATTTTCAGGATAGCTTTATCTTATCAAAA
GCTCACAAGTATAGATTACAATGCTATTATACTGAACCAGGTTTCTTGGATGACATATTTGATGTAAAGAGGTACTGGAAGTTACGGAAGTATCTCCAGGCAAACCAGTG
GCTTGAAGTTTGGTTGAAAAGGGAACTTCAAGCTTTGATTCAGAGTCAAGACCAAATAGTTGGGTGGAAAGGGACAAAGCTCTCCATTCCTCATTCCTACGTTCTCCTAC
GGTATCAAACAGAAACTCCTGAACTGAAGAGAGAAAAGTTTAGCCACGTGATCCTTGATGCAGCAAAGCCATTCCTGTCAGCAAGAGCAGACCGATTCGTGCTCGAGTTG
GAGCTGTTTCTTGCTTCGGGTTTGAACATCGAAGCCTATGATTCGGTTTACTTGCAACGGTTAGGCTGGAACGAGCCTGTAGTCCCAAGTGTGGCTATCAAAGAAGATCT
TGGACTCAAACCTGTAACTCCATACTTGTATATCTTTGAATATGACCCTGATGATGGTGATTAA
Protein sequenceShow/hide protein sequence
MSERAMELQSTAPMEITTSSSSSDDTNPCPICLGPIIQPSYLDKCFHKFCYNCIVQWTKVVSGKHSCTLSSIKCPLCKTESSSIIHGLDGHCFQRHYVNRDFQDSFILSK
AHKYRLQCYYTEPGFLDDIFDVKRYWKLRKYLQANQWLEVWLKRELQALIQSQDQIVGWKGTKLSIPHSYVLLRYQTETPELKREKFSHVILDAAKPFLSARADRFVLEL
ELFLASGLNIEAYDSVYLQRLGWNEPVVPSVAIKEDLGLKPVTPYLYIFEYDPDDGD