; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G005760 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G005760
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr11:6130424..6131663
RNA-Seq ExpressionLsi11G005760
SyntenyLsi11G005760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048017.1 hypothetical protein E6C27_scaffold385G00850 [Cucumis melo var. makuwa]1.8e-4081.08Show/hide
Query:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSSRAGTGFILIFSSKLVLSCCSNKSISMNWENCHPVRLTSRPFWGIVSSSSRNMVLLAGYWVGPDVDDGW
        MASFVSLSFSVPQ  +KEIPP KLAK TVVS RAGT      +SKLVL C S KSISMNWEN   VRLTSRPFWGIVSSSSRNMVLL GYWVGPDVDDGW
Subjt:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSSRAGTGFILIFSSKLVLSCCSNKSISMNWENCHPVRLTSRPFWGIVSSSSRNMVLLAGYWVGPDVDDGW

Query:  GYVEAFIDRIT
        GY+EAFIDRIT
Subjt:  GYVEAFIDRIT

XP_022946526.1 uncharacterized protein LOC111450562 [Cucurbita moschata]2.1e-4181.98Show/hide
Query:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSSRAGTGFILIFSSKLVLSCCSNKSISMNWENCHPVRLTSRPFWGIVSSSSRNMVLLAGYWVGPDVDDGW
        MASFVSLSFSVPQ I KE+PP KLAKVTVV  RAGT      +SK VLSCC+NKSIS NWENCHPVRLTSRPFWGIVSSSSRN+V LAGYWVGPDVDDGW
Subjt:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSSRAGTGFILIFSSKLVLSCCSNKSISMNWENCHPVRLTSRPFWGIVSSSSRNMVLLAGYWVGPDVDDGW

Query:  GYVEAFIDRIT
        GY+EAF+DRIT
Subjt:  GYVEAFIDRIT

XP_022999037.1 uncharacterized protein LOC111493548 [Cucurbita maxima]9.4e-4281.98Show/hide
Query:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSSRAGTGFILIFSSKLVLSCCSNKSISMNWENCHPVRLTSRPFWGIVSSSSRNMVLLAGYWVGPDVDDGW
        MASFVSLSFSVPQ I KE+PP KLAKVTVV  RAGT      +SK VLSCCSNKSISMNWENC PVRLTSRPFWGIVSSSSRN+V LAGYWVGPDVDDGW
Subjt:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSSRAGTGFILIFSSKLVLSCCSNKSISMNWENCHPVRLTSRPFWGIVSSSSRNMVLLAGYWVGPDVDDGW

Query:  GYVEAFIDRIT
        GY+EA +DRIT
Subjt:  GYVEAFIDRIT

XP_023545344.1 uncharacterized protein LOC111804783 isoform X1 [Cucurbita pepo subsp. pepo]5.0e-4382.88Show/hide
Query:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSSRAGTGFILIFSSKLVLSCCSNKSISMNWENCHPVRLTSRPFWGIVSSSSRNMVLLAGYWVGPDVDDGW
        MASFVSLSFSVPQ I KE+PP KLAKVTVV  RAGT      +S  VLSCCSNKSISMNWENCHPVRLTSRPFWGIVSSSSRN+V LAGYWVGPDVDDGW
Subjt:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSSRAGTGFILIFSSKLVLSCCSNKSISMNWENCHPVRLTSRPFWGIVSSSSRNMVLLAGYWVGPDVDDGW

Query:  GYVEAFIDRIT
        GY+EAF+DRIT
Subjt:  GYVEAFIDRIT

XP_038890542.1 uncharacterized protein LOC120080060 [Benincasa hispida]2.6e-4482.88Show/hide
Query:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSSRAGTGFILIFSSKLVLSCCSNKSISMNWENCHPVRLTSRPFWGIVSSSSRNMVLLAGYWVGPDVDDGW
        MA+FVSLSFSVPQ  +KEIPPRKL++VTVVSSRAGT      +SKLVLSCCSN SISMNW+NCHPVRLT RPFWGIVSSSSR MVLL+GYWVGPDVDDGW
Subjt:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSSRAGTGFILIFSSKLVLSCCSNKSISMNWENCHPVRLTSRPFWGIVSSSSRNMVLLAGYWVGPDVDDGW

Query:  GYVEAFIDRIT
        GY+EAFIDRIT
Subjt:  GYVEAFIDRIT

TrEMBL top hitse value%identityAlignment
A0A0A0LJQ7 Uncharacterized protein1.2e-3979.28Show/hide
Query:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSSRAGTGFILIFSSKLVLSCCSNKSISMNWENCHPVRLTSRPFWGIVSSSSRNMVLLAGYWVGPDVDDGW
        MASFVSLSFSVPQ  +KEIPPRKLAK T+VS RAGT      +SKLVL   S KSIS+NWEN   VRLTSRPFWGIVSSSSRNMVLL GYWVGPDVDDGW
Subjt:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSSRAGTGFILIFSSKLVLSCCSNKSISMNWENCHPVRLTSRPFWGIVSSSSRNMVLLAGYWVGPDVDDGW

Query:  GYVEAFIDRIT
        GY+EAFIDRIT
Subjt:  GYVEAFIDRIT

A0A5A7U1B8 Uncharacterized protein8.6e-4181.08Show/hide
Query:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSSRAGTGFILIFSSKLVLSCCSNKSISMNWENCHPVRLTSRPFWGIVSSSSRNMVLLAGYWVGPDVDDGW
        MASFVSLSFSVPQ  +KEIPP KLAK TVVS RAGT      +SKLVL C S KSISMNWEN   VRLTSRPFWGIVSSSSRNMVLL GYWVGPDVDDGW
Subjt:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSSRAGTGFILIFSSKLVLSCCSNKSISMNWENCHPVRLTSRPFWGIVSSSSRNMVLLAGYWVGPDVDDGW

Query:  GYVEAFIDRIT
        GY+EAFIDRIT
Subjt:  GYVEAFIDRIT

A0A5D3CPK7 Uncharacterized protein2.5e-4080.18Show/hide
Query:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSSRAGTGFILIFSSKLVLSCCSNKSISMNWENCHPVRLTSRPFWGIVSSSSRNMVLLAGYWVGPDVDDGW
        MASFVSLSFSVPQ  +KEIPP KLAK TVVS RAGT        KLVL C S KSISMNWEN   VRLTSRPFWGIVSSSSRNMVLL GYWVGPDVDDGW
Subjt:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSSRAGTGFILIFSSKLVLSCCSNKSISMNWENCHPVRLTSRPFWGIVSSSSRNMVLLAGYWVGPDVDDGW

Query:  GYVEAFIDRIT
        GY+EAFIDRIT
Subjt:  GYVEAFIDRIT

A0A6J1G3X3 uncharacterized protein LOC1114505621.0e-4181.98Show/hide
Query:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSSRAGTGFILIFSSKLVLSCCSNKSISMNWENCHPVRLTSRPFWGIVSSSSRNMVLLAGYWVGPDVDDGW
        MASFVSLSFSVPQ I KE+PP KLAKVTVV  RAGT      +SK VLSCC+NKSIS NWENCHPVRLTSRPFWGIVSSSSRN+V LAGYWVGPDVDDGW
Subjt:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSSRAGTGFILIFSSKLVLSCCSNKSISMNWENCHPVRLTSRPFWGIVSSSSRNMVLLAGYWVGPDVDDGW

Query:  GYVEAFIDRIT
        GY+EAF+DRIT
Subjt:  GYVEAFIDRIT

A0A6J1K9Q0 uncharacterized protein LOC1114935484.6e-4281.98Show/hide
Query:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSSRAGTGFILIFSSKLVLSCCSNKSISMNWENCHPVRLTSRPFWGIVSSSSRNMVLLAGYWVGPDVDDGW
        MASFVSLSFSVPQ I KE+PP KLAKVTVV  RAGT      +SK VLSCCSNKSISMNWENC PVRLTSRPFWGIVSSSSRN+V LAGYWVGPDVDDGW
Subjt:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSSRAGTGFILIFSSKLVLSCCSNKSISMNWENCHPVRLTSRPFWGIVSSSSRNMVLLAGYWVGPDVDDGW

Query:  GYVEAFIDRIT
        GY+EA +DRIT
Subjt:  GYVEAFIDRIT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCTTCGTTTCTCTGAGCTTCTCCGTTCCACAGTCCATTATCAAGGAAATCCCGCCCCGGAAACTGGCTAAAGTTACAGTAGTTTCAAGCCGAGCTGGAACAGG
TTTCATTCTCATTTTTTCTTCGAAGCTTGTGCTATCCTGTTGCTCAAATAAATCCATATCTATGAATTGGGAAAACTGCCATCCTGTACGGTTAACTTCAAGACCTTTTT
GGGGCATAGTTTCTTCTAGTTCCAGGAATATGGTATTATTAGCTGGCTACTGGGTAGGACCTGATGTTGATGACGGATGGGGATATGTAGAAGCTTTTATTGATCGGATT
ACTTAA
mRNA sequenceShow/hide mRNA sequence
TTATCGGCCCTTTTAAAAGGAGCAGCAGCGGCAAAGGCAAAGGGGACCCAAGTAGCTTGGGGTTTCGTAATTTCGTAGCGTTGCTTTCATGGCGAGCTTCGTTTCTCTGA
GCTTCTCCGTTCCACAGTCCATTATCAAGGAAATCCCGCCCCGGAAACTGGCTAAAGTTACAGTAGTTTCAAGCCGAGCTGGAACAGGTTTCATTCTCATTTTTTCTTCG
AAGCTTGTGCTATCCTGTTGCTCAAATAAATCCATATCTATGAATTGGGAAAACTGCCATCCTGTACGGTTAACTTCAAGACCTTTTTGGGGCATAGTTTCTTCTAGTTC
CAGGAATATGGTATTATTAGCTGGCTACTGGGTAGGACCTGATGTTGATGACGGATGGGGATATGTAGAAGCTTTTATTGATCGGATTACTTAA
Protein sequenceShow/hide protein sequence
MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSSRAGTGFILIFSSKLVLSCCSNKSISMNWENCHPVRLTSRPFWGIVSSSSRNMVLLAGYWVGPDVDDGWGYVEAFIDRI
T