; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G005890 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G005890
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationchr11:6245580..6252490
RNA-Seq ExpressionLsi11G005890
SyntenyLsi11G005890
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030236.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.4e-12672.67Show/hide
Query:  MATGMKLPMAVSLQKPMAMAAPSSSSSLPRGINFRTVFCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAAPA
        MATGMKLPMAVSLQKPMAMA PSSSS LPRGINFRT    NATSKAKIPLPPINPKDPFLSKLASVASTSPETLL+RP NSDS PYLDIFD+PQLMAAPA
Subjt:  MATGMKLPMAVSLQKPMAMAAPSSSSSLPRGINFRTVFCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAAPA

Query:  QVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGETIHTVAVGAAIGQACLLLAAGSEGK
        QVERSVSYNEHR RRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIA+LMYLQWMDPKEPIY+YINS+GTTRDDGETIHT+ VGAAIGQACLLLAAG++GK
Subjt:  QVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGETIHTVAVGAAIGQACLLLAAGSEGK

Query:  RFMMPHAKAMIQQPRVPSSGLMPASD-----------------------------------------VITNRDTLVKLLAKHTGN---------------
        RFMMPH+KAMIQQPRVPSSGLMPASD                                         VITNRDTLV+LLAKHTGN               
Subjt:  RFMMPHAKAMIQQPRVPSSGLMPASD-----------------------------------------VITNRDTLVKLLAKHTGN---------------

Query:  -------------ILWRGQEKIMADVAAPEEWDKGAGIKVVDEI
                     ILWRGQEKIMA+VA+PE+WDKGAGIK VDE+
Subjt:  -------------ILWRGQEKIMADVAAPEEWDKGAGIKVVDEI

XP_008454159.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Cucumis melo]2.3e-12977.34Show/hide
Query:  MATGMKLPMAVSLQKP--MAMAAPSSSSSLPRGINFRTVFCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAA
        MA GMKLPMAV+LQKP  MAMAAPSSSSSL R INFRTV C+NATSKAKIP+PPINPKDPFLSKLASVASTSPETLLNRP NSDSPPYLDIFDAP+LMAA
Subjt:  MATGMKLPMAVSLQKP--MAMAAPSSSSSLPRGINFRTVFCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAA

Query:  PAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IH
        PAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTEL++AELMYLQWMDPKEPIY+YINSTGTTRDDGET                    IH
Subjt:  PAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IH

Query:  TVAVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN---------------------------
        TVAVGAAIGQACLLLAAGSEG+R+MMPHAKAMIQQPRVPSSGLMPASD       VITNRDTLVKLLAKHTGN                           
Subjt:  TVAVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN---------------------------

Query:  -ILWRGQEKIMADVAAPEEWDKGAGIKVVDE
         ILWRGQEKIM+ V APE+WDKGAGIKVVDE
Subjt:  -ILWRGQEKIMADVAAPEEWDKGAGIKVVDE

XP_022150809.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Momordica charantia]1.5e-13379.94Show/hide
Query:  MATGMKLPMAVSLQKPMAMAAPSSSSSLPRGINFRTVFCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAAPA
        MATGMKLPMA+SLQKPMAMA+ SSSSSL RG NFRTV CTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRP+NSDSPPYLD+FDAPQLMAAPA
Subjt:  MATGMKLPMAVSLQKPMAMAAPSSSSSLPRGINFRTVFCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAAPA

Query:  QVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IHTV
        QVERSVSYNEHRPRRPPPDLPSLLL+GRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET                    IHTV
Subjt:  QVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IHTV

Query:  AVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN----------------------------I
        AVGAAIGQACLLLAAGS+GKRFMMPHAKAMIQQPRVPSSGLMPASD       VITNRDTLVKLLAKHTGN                            I
Subjt:  AVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN----------------------------I

Query:  LWRGQEKIMADVAAPEEWDKGAGIKVVDE
        LWRGQEKIMADVAAPEEWDKGAGIKV DE
Subjt:  LWRGQEKIMADVAAPEEWDKGAGIKVVDE

XP_023545293.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Cucurbita pepo subsp. pepo]6.2e-12775.76Show/hide
Query:  MATGMKLPMAVSLQKPMAMAAPSSSSSLPRGINFRTVFCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAAPA
        MATGMKLPMAVSLQKPMAMA PSSSS LPRGINFRT    NATSKAKIPLPPINPKDPFLSKLASVASTSPETLL+RP NSDS PYLDIFD+PQLMAAPA
Subjt:  MATGMKLPMAVSLQKPMAMAAPSSSSSLPRGINFRTVFCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAAPA

Query:  QVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IHTV
        QVERSVSYNEHR RRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIA+LMYLQWMDPKEPIY+YINS+GTTRDDGET                    IHT+
Subjt:  QVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IHTV

Query:  AVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN----------------------------I
         VGAAIGQACLLLAAG++GKRFMMPH+KAMIQQPRVPSSGLMPASD       VITNRDTLV+LLAKHTGN                            I
Subjt:  AVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN----------------------------I

Query:  LWRGQEKIMADVAAPEEWDKGAGIKVVDEI
        LWRGQEKIMA+VA+PE+WDKGAGIK VDE+
Subjt:  LWRGQEKIMADVAAPEEWDKGAGIKVVDEI

XP_038890491.1 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic [Benincasa hispida]3.9e-13781.76Show/hide
Query:  MATGMKLPMAVSLQKPMAMAAPSSSSSLPRGINFRTVFCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAAPA
        MATGMKLPMAV+LQKPMAMAAPSSSSSLPRGINFRT+ CTN TSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRP NSDSPPYLDIFDAPQLMAAPA
Subjt:  MATGMKLPMAVSLQKPMAMAAPSSSSSLPRGINFRTVFCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAAPA

Query:  QVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IHTV
        QVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET                    IHTV
Subjt:  QVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IHTV

Query:  AVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN----------------------------I
        AVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD       VITNRDTLVKLLAKHTGN                            I
Subjt:  AVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN----------------------------I

Query:  LWRGQEKIMADVAAPEEWDKGAGIKVVDE
        LWRGQEKIMADVAAPEEWDKGAGIKVVDE
Subjt:  LWRGQEKIMADVAAPEEWDKGAGIKVVDE

TrEMBL top hitse value%identityAlignment
A0A1S3BXZ3 ATP-dependent Clp protease proteolytic subunit1.1e-12977.34Show/hide
Query:  MATGMKLPMAVSLQKP--MAMAAPSSSSSLPRGINFRTVFCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAA
        MA GMKLPMAV+LQKP  MAMAAPSSSSSL R INFRTV C+NATSKAKIP+PPINPKDPFLSKLASVASTSPETLLNRP NSDSPPYLDIFDAP+LMAA
Subjt:  MATGMKLPMAVSLQKP--MAMAAPSSSSSLPRGINFRTVFCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAA

Query:  PAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IH
        PAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTEL++AELMYLQWMDPKEPIY+YINSTGTTRDDGET                    IH
Subjt:  PAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IH

Query:  TVAVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN---------------------------
        TVAVGAAIGQACLLLAAGSEG+R+MMPHAKAMIQQPRVPSSGLMPASD       VITNRDTLVKLLAKHTGN                           
Subjt:  TVAVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN---------------------------

Query:  -ILWRGQEKIMADVAAPEEWDKGAGIKVVDE
         ILWRGQEKIM+ V APE+WDKGAGIKVVDE
Subjt:  -ILWRGQEKIMADVAAPEEWDKGAGIKVVDE

A0A5A7U3K5 ATP-dependent Clp protease proteolytic subunit1.1e-12977.34Show/hide
Query:  MATGMKLPMAVSLQKP--MAMAAPSSSSSLPRGINFRTVFCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAA
        MA GMKLPMAV+LQKP  MAMAAPSSSSSL R INFRTV C+NATSKAKIP+PPINPKDPFLSKLASVASTSPETLLNRP NSDSPPYLDIFDAP+LMAA
Subjt:  MATGMKLPMAVSLQKP--MAMAAPSSSSSLPRGINFRTVFCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAA

Query:  PAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IH
        PAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTEL++AELMYLQWMDPKEPIY+YINSTGTTRDDGET                    IH
Subjt:  PAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IH

Query:  TVAVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN---------------------------
        TVAVGAAIGQACLLLAAGSEG+R+MMPHAKAMIQQPRVPSSGLMPASD       VITNRDTLVKLLAKHTGN                           
Subjt:  TVAVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN---------------------------

Query:  -ILWRGQEKIMADVAAPEEWDKGAGIKVVDE
         ILWRGQEKIM+ V APE+WDKGAGIKVVDE
Subjt:  -ILWRGQEKIMADVAAPEEWDKGAGIKVVDE

A0A6J1D9I5 ATP-dependent Clp protease proteolytic subunit7.4e-13479.94Show/hide
Query:  MATGMKLPMAVSLQKPMAMAAPSSSSSLPRGINFRTVFCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAAPA
        MATGMKLPMA+SLQKPMAMA+ SSSSSL RG NFRTV CTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRP+NSDSPPYLD+FDAPQLMAAPA
Subjt:  MATGMKLPMAVSLQKPMAMAAPSSSSSLPRGINFRTVFCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAAPA

Query:  QVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IHTV
        QVERSVSYNEHRPRRPPPDLPSLLL+GRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET                    IHTV
Subjt:  QVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IHTV

Query:  AVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN----------------------------I
        AVGAAIGQACLLLAAGS+GKRFMMPHAKAMIQQPRVPSSGLMPASD       VITNRDTLVKLLAKHTGN                            I
Subjt:  AVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN----------------------------I

Query:  LWRGQEKIMADVAAPEEWDKGAGIKVVDE
        LWRGQEKIMADVAAPEEWDKGAGIKV DE
Subjt:  LWRGQEKIMADVAAPEEWDKGAGIKVVDE

A0A6J1G379 ATP-dependent Clp protease proteolytic subunit6.7e-12775.45Show/hide
Query:  MATGMKLPMAVSLQKPMAMAAPSSSSSLPRGINFRTVFCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAAPA
        MATGMKLPMAVSLQKPMAMA PSSSS LPRGINFRT    NATSKAKIPLPPINPKDPFLSKLASVASTSPETLL+RP NSDS PYLDIFD+PQLMAAPA
Subjt:  MATGMKLPMAVSLQKPMAMAAPSSSSSLPRGINFRTVFCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAAPA

Query:  QVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IHTV
        QVERSVSYNEHR RRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIA+LMYLQWMDPKEPIY+YINS+GTTRDDGET                    IHT+
Subjt:  QVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IHTV

Query:  AVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN----------------------------I
         VGAAIGQACLLLAAG++G+RFMMPH+KAMIQQPRVPSSGLMPASD       VITNRDTLV+LLAKHTGN                            I
Subjt:  AVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN----------------------------I

Query:  LWRGQEKIMADVAAPEEWDKGAGIKVVDEI
        LWRGQEKIMA+VA+PE+WDKGAGIK VDE+
Subjt:  LWRGQEKIMADVAAPEEWDKGAGIKVVDEI

A0A6J1KFX9 ATP-dependent Clp protease proteolytic subunit2.4e-12474.24Show/hide
Query:  MATGMKLPMAVSLQKPMAMAAPSSSSSLPRGINFRTVFCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAAPA
        MATGMKLPMAVSLQKPMAMA PSSSS LPR INF T    +ATSKAKIPLPPINPKDPFL+KLASVASTSPETLL+RP NSDS PYLDIFD+PQLMAAPA
Subjt:  MATGMKLPMAVSLQKPMAMAAPSSSSSLPRGINFRTVFCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAAPA

Query:  QVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IHTV
        QVERSVSYNEHR RRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIA+LMYLQWMDPKEPIY+YINS+GTTRDDGET                    IHT+
Subjt:  QVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IHTV

Query:  AVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN----------------------------I
         VGAAIGQACLLLAAG++G+RFMMPH+KAMIQQPRVPSSGLMPASD       VITNRDTLV+LLAKHTGN                            I
Subjt:  AVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN----------------------------I

Query:  LWRGQEKIMADVAAPEEWDKGAGIKVVDEI
        LWRGQEKIMA+VA+PE+WDKGAGIK VDE+
Subjt:  LWRGQEKIMADVAAPEEWDKGAGIKVVDEI

SwissProt top hitse value%identityAlignment
P74466 Putative ATP-dependent Clp protease proteolytic subunit-like1.6e-2436.51Show/hide
Query:  RSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET-----------------
        +S  Y +   + PPPDL SLLL  RIVY+GMPL  +          VT+L+IA+L+YLQ+ DP +PIY YINSTGT+   G+                  
Subjt:  RSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET-----------------

Query:  ---IHTVAVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSG-----LMPASDVITNRDTLVKLLAKHTGNILWRGQEKIMADV
           +HT+ +G A+G A ++L++G++G R  +PHA  ++ Q R  + G      + A +VI+N+ T++++L+ +TG    + QEK+  D+
Subjt:  ---IHTVAVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSG-----LMPASDVITNRDTLVKLLAKHTGNILWRGQEKIMADV

Q8L770 ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic7.9e-10162.61Show/hide
Query:  MAVSLQKPMAMAAPSSSSSLPR---------GINFRTV-FCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAA
        MA  LQ  M    P SSS  P            N +T  +   A + AKIP+PPINPKDPFLS LAS+A+ SPE LLNRP N+D PPYLDIFD+PQLM++
Subjt:  MAVSLQKPMAMAAPSSSSSLPR---------GINFRTV-FCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAA

Query:  PAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IH
        PAQVERSV+YNEHRPR PPPDLPS+LL GRIVYIGMPLVPAVTELV+AELMYLQW+DPKEPIY+YINSTGTTRDDGET                    +H
Subjt:  PAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IH

Query:  TVAVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN---------------------------
        TV VGAAIGQACLLL+AG++GKRFMMPHAKAMIQQPRVPSSGLMPASD       VITNRD LV+LL+KHTGN                           
Subjt:  TVAVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN---------------------------

Query:  -ILWRGQEKIMADVAAPEEWDKGAGIKVV
         ILWRGQEKI+ADV   EE+DK AGIK V
Subjt:  -ILWRGQEKIMADVAAPEEWDKGAGIKVV

Q8LB10 ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic1.6e-2440.21Show/hide
Query:  RPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRD------DGET-------------IHTVAVGAAIGQACLLLAA
        +PPPDL S L   RIVY+GM LVP+VTEL++AE +YLQ+ D ++PIYLYINSTGTT++      D E              I T+ VG A G+A LLL A
Subjt:  RPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRD------DGET-------------IHTVAVGAAIGQACLLLAA

Query:  GSEGKRFMMPHAKAMIQQPRVPSSGLMPASDVITNR-------DTLVKLLAKHTGNILWRGQEKIMADVAAPEEWDKGAGIK--VVDEI
        G++G R  +P +  MI+QP     G   A+DV   R         +VKL +KH G    +  E+I AD+  P+ +     ++  ++D++
Subjt:  GSEGKRFMMPHAKAMIQQPRVPSSGLMPASDVITNR-------DTLVKLLAKHTGNILWRGQEKIMADVAAPEEWDKGAGIK--VVDEI

Q9L4P4 Putative ATP-dependent Clp protease proteolytic subunit-like1.9e-2536.61Show/hide
Query:  MAAPAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGETI--------
        M    Q  ++  Y +   R PPPDLPSLLL  RI+Y+GMPL  +          VTEL+IA+L+YL++ +P++PIY YINSTGT+   G+ I        
Subjt:  MAAPAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPA----------VTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGETI--------

Query:  ------------HTVAVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSG-----LMPASDVITNRDTLVKLLAKHTG
                    HT+ +G A+G A ++L+ G+ G R  +PHA  ++ QPR  + G      + A +V+ N+ T++++ A++TG
Subjt:  ------------HTVAVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSG-----LMPASDVITNRDTLVKLLAKHTG

Q9XJ35 ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic6.4e-2639.67Show/hide
Query:  RPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IHTVAVGAAIGQACL
        RPR  PPDLPSLLL  RI Y+GMP+VPAVTEL++A+ M+L + +P +PIYLYINS GT  +  ET                    ++T+  G A GQA +
Subjt:  RPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IHTVAVGAAIGQACL

Query:  LLAAGSEGKRFMMPHAKAMIQQPRV-PSSGL-----MPASDVITNRDTLVKLLAKHTGNILWRGQEKIMADVAAPEEWDKGAGI
        LL+ G +G R + PH+   +  P+V  SSG      + A ++  N +  ++LLAK TG    + +E+I  D+  P+     A I
Subjt:  LLAAGSEGKRFMMPHAKAMIQQPRV-PSSGL-----MPASDVITNRDTLVKLLAKHTGNILWRGQEKIMADVAAPEEWDKGAGI

Arabidopsis top hitse value%identityAlignment
AT1G09130.1 ATP-dependent caseinolytic (Clp) protease/crotonase family protein5.6e-10262.61Show/hide
Query:  MAVSLQKPMAMAAPSSSSSLPR---------GINFRTV-FCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAA
        MA  LQ  M    P SSS  P            N +T  +   A + AKIP+PPINPKDPFLS LAS+A+ SPE LLNRP N+D PPYLDIFD+PQLM++
Subjt:  MAVSLQKPMAMAAPSSSSSLPR---------GINFRTV-FCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAA

Query:  PAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IH
        PAQVERSV+YNEHRPR PPPDLPS+LL GRIVYIGMPLVPAVTELV+AELMYLQW+DPKEPIY+YINSTGTTRDDGET                    +H
Subjt:  PAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IH

Query:  TVAVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN---------------------------
        TV VGAAIGQACLLL+AG++GKRFMMPHAKAMIQQPRVPSSGLMPASD       VITNRD LV+LL+KHTGN                           
Subjt:  TVAVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN---------------------------

Query:  -ILWRGQEKIMADVAAPEEWDKGAGIKVV
         ILWRGQEKI+ADV   EE+DK AGIK V
Subjt:  -ILWRGQEKIMADVAAPEEWDKGAGIKVV

AT1G09130.2 ATP-dependent caseinolytic (Clp) protease/crotonase family protein5.6e-10262.61Show/hide
Query:  MAVSLQKPMAMAAPSSSSSLPR---------GINFRTV-FCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAA
        MA  LQ  M    P SSS  P            N +T  +   A + AKIP+PPINPKDPFLS LAS+A+ SPE LLNRP N+D PPYLDIFD+PQLM++
Subjt:  MAVSLQKPMAMAAPSSSSSLPR---------GINFRTV-FCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAA

Query:  PAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IH
        PAQVERSV+YNEHRPR PPPDLPS+LL GRIVYIGMPLVPAVTELV+AELMYLQW+DPKEPIY+YINSTGTTRDDGET                    +H
Subjt:  PAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IH

Query:  TVAVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN---------------------------
        TV VGAAIGQACLLL+AG++GKRFMMPHAKAMIQQPRVPSSGLMPASD       VITNRD LV+LL+KHTGN                           
Subjt:  TVAVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN---------------------------

Query:  -ILWRGQEKIMADVAAPEEWDKGAGIKVV
         ILWRGQEKI+ADV   EE+DK AGIK V
Subjt:  -ILWRGQEKIMADVAAPEEWDKGAGIKVV

AT1G09130.3 ATP-dependent caseinolytic (Clp) protease/crotonase family protein9.6e-10262.69Show/hide
Query:  MAVSLQKPMAMAAPSSSSSLPR---------GINFRTV-FCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAA
        MA  LQ  M    P SSS  P            N +T  +   A + AKIP+PPINPKDPFLS LAS+A+ SPE LLNRP N+D PPYLDIFD+PQLM++
Subjt:  MAVSLQKPMAMAAPSSSSSLPR---------GINFRTV-FCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAA

Query:  PAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IH
        PAQVERSV+YNEHRPR PPPDLPS+LL GRIVYIGMPLVPAVTELV+AELMYLQW+DPKEPIY+YINSTGTTRDDGET                    +H
Subjt:  PAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IH

Query:  TVAVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN---------------------------
        TV VGAAIGQACLLL+AG++GKRFMMPHAKAMIQQPRVPSSGLMPASD       VITNRD LV+LL+KHTGN                           
Subjt:  TVAVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSGLMPASD-------VITNRDTLVKLLAKHTGN---------------------------

Query:  -ILWRGQEKIMADVAAPEEWDKGAGIK
         ILWRGQEKI+ADV   EE+DK AGIK
Subjt:  -ILWRGQEKIMADVAAPEEWDKGAGIK

AT1G49970.1 CLP protease proteolytic subunit 14.5e-2739.67Show/hide
Query:  RPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IHTVAVGAAIGQACL
        RPR  PPDLPSLLL  RI Y+GMP+VPAVTEL++A+ M+L + +P +PIYLYINS GT  +  ET                    ++T+  G A GQA +
Subjt:  RPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGET--------------------IHTVAVGAAIGQACL

Query:  LLAAGSEGKRFMMPHAKAMIQQPRV-PSSGL-----MPASDVITNRDTLVKLLAKHTGNILWRGQEKIMADVAAPEEWDKGAGI
        LL+ G +G R + PH+   +  P+V  SSG      + A ++  N +  ++LLAK TG    + +E+I  D+  P+     A I
Subjt:  LLAAGSEGKRFMMPHAKAMIQQPRV-PSSGL-----MPASDVITNRDTLVKLLAKHTGNILWRGQEKIMADVAAPEEWDKGAGI

AT4G17040.1 CLP protease R subunit 41.1e-2540.21Show/hide
Query:  RPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRD------DGET-------------IHTVAVGAAIGQACLLLAA
        +PPPDL S L   RIVY+GM LVP+VTEL++AE +YLQ+ D ++PIYLYINSTGTT++      D E              I T+ VG A G+A LLL A
Subjt:  RPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRD------DGET-------------IHTVAVGAAIGQACLLLAA

Query:  GSEGKRFMMPHAKAMIQQPRVPSSGLMPASDVITNR-------DTLVKLLAKHTGNILWRGQEKIMADVAAPEEWDKGAGIK--VVDEI
        G++G R  +P +  MI+QP     G   A+DV   R         +VKL +KH G    +  E+I AD+  P+ +     ++  ++D++
Subjt:  GSEGKRFMMPHAKAMIQQPRVPSSGLMPASDVITNR-------DTLVKLLAKHTGNILWRGQEKIMADVAAPEEWDKGAGIK--VVDEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACTGGGATGAAGCTTCCCATGGCCGTTAGCTTGCAGAAACCCATGGCTATGGCGGCTCCATCTTCGTCATCTTCTCTTCCTAGAGGCATCAATTTCAGGACTGT
TTTCTGCACAAACGCTACAAGCAAAGCTAAAATCCCTTTACCTCCCATAAACCCGAAGGATCCATTTCTTTCGAAGCTCGCTTCAGTAGCTTCAACCTCACCTGAAACGT
TGCTAAACCGCCCTGCAAATTCCGATTCTCCTCCATATTTGGATATTTTTGATGCTCCTCAGCTCATGGCTGCACCTGCACAAGTCGAAAGATCAGTTTCCTACAATGAG
CATAGGCCGAGGAGGCCGCCACCGGACTTGCCGTCTCTGTTACTTCATGGAAGAATTGTTTACATCGGAATGCCTTTGGTTCCAGCTGTCACGGAGCTAGTTATTGCTGA
ACTGATGTACTTGCAATGGATGGATCCAAAAGAACCAATATATCTTTACATAAACTCCACAGGAACAACTCGTGATGATGGTGAAACGATACACACAGTGGCTGTTGGAG
CTGCCATAGGTCAAGCTTGTCTATTGCTTGCTGCAGGAAGTGAAGGCAAACGTTTTATGATGCCACATGCCAAAGCGATGATACAGCAGCCCCGTGTCCCTTCATCTGGT
TTGATGCCTGCTAGTGACGTGATAACAAACAGGGACACACTAGTGAAACTCTTAGCAAAGCACACTGGAAATATTCTTTGGCGCGGTCAGGAGAAGATTATGGCTGATGT
GGCTGCCCCAGAGGAATGGGACAAAGGAGCTGGCATCAAAGTTGTTGATGAAATCTAA
mRNA sequenceShow/hide mRNA sequence
AGTAATTGGGCCTCTCTCATATAATTCGGCCCAAAAGTCGGCCCTTTCGAACATTTCTCCTCTACGAATCGGAATGTAATTCTACTCCTTACATTTCTCACGTCTCTGAG
AAACTCCGCAAGAAGCTAAAAATCCAAGAAAAATGGCCACTGGGATGAAGCTTCCCATGGCCGTTAGCTTGCAGAAACCCATGGCTATGGCGGCTCCATCTTCGTCATCT
TCTCTTCCTAGAGGCATCAATTTCAGGACTGTTTTCTGCACAAACGCTACAAGCAAAGCTAAAATCCCTTTACCTCCCATAAACCCGAAGGATCCATTTCTTTCGAAGCT
CGCTTCAGTAGCTTCAACCTCACCTGAAACGTTGCTAAACCGCCCTGCAAATTCCGATTCTCCTCCATATTTGGATATTTTTGATGCTCCTCAGCTCATGGCTGCACCTG
CACAAGTCGAAAGATCAGTTTCCTACAATGAGCATAGGCCGAGGAGGCCGCCACCGGACTTGCCGTCTCTGTTACTTCATGGAAGAATTGTTTACATCGGAATGCCTTTG
GTTCCAGCTGTCACGGAGCTAGTTATTGCTGAACTGATGTACTTGCAATGGATGGATCCAAAAGAACCAATATATCTTTACATAAACTCCACAGGAACAACTCGTGATGA
TGGTGAAACGATACACACAGTGGCTGTTGGAGCTGCCATAGGTCAAGCTTGTCTATTGCTTGCTGCAGGAAGTGAAGGCAAACGTTTTATGATGCCACATGCCAAAGCGA
TGATACAGCAGCCCCGTGTCCCTTCATCTGGTTTGATGCCTGCTAGTGACGTGATAACAAACAGGGACACACTAGTGAAACTCTTAGCAAAGCACACTGGAAATATTCTT
TGGCGCGGTCAGGAGAAGATTATGGCTGATGTGGCTGCCCCAGAGGAATGGGACAAAGGAGCTGGCATCAAAGTTGTTGATGAAATCTAAATCTCCTCTCAAATCTCCTC
TCCATTCATAGCAAGGTTTCACTGGAATTGAAATTTGGGAGAGAATGAGAACCATAATTTTGTTGGTCCAAAGTGTCTCCATCTGTCTAGGTCATAGATTTGTAATTCCT
TTTAGTCCATTTAGTTGTTAAATTGAGGGAAAAATTTGCTTGGATCAGTTGAAATCTTTAACAATAATAATACCATCTCAATGATGTAAATATGTAGCCTCCTGCAAATT
TTCCTGCCTATGCTTTCCAAATACAATATATAAACTAGAAGTTTAAGCCTGAATTTTCGAGTTAGTTCAAGTTTGTTTGGTCTTTGAACTTTAAAAGTGTAAGAAGTCAT
TAAATTTTTAATTTTTTTTTCTTCTTGAAGTCTTTGAACTTTAAAAGGTTTTTCAATAGGTCCTAAAATTTTCAATGTTGTGCTTGATAGATCTTTGACCTATTTGATAT
TTTTATAATTCACAAACGTT
Protein sequenceShow/hide protein sequence
MATGMKLPMAVSLQKPMAMAAPSSSSSLPRGINFRTVFCTNATSKAKIPLPPINPKDPFLSKLASVASTSPETLLNRPANSDSPPYLDIFDAPQLMAAPAQVERSVSYNE
HRPRRPPPDLPSLLLHGRIVYIGMPLVPAVTELVIAELMYLQWMDPKEPIYLYINSTGTTRDDGETIHTVAVGAAIGQACLLLAAGSEGKRFMMPHAKAMIQQPRVPSSG
LMPASDVITNRDTLVKLLAKHTGNILWRGQEKIMADVAAPEEWDKGAGIKVVDEI