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Lsi11G006070 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G006070
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionF-box protein PP2-B15-like
Genome locationchr11:6425612..6425935
RNA-Seq ExpressionLsi11G006070
SyntenyLsi11G006070
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599205.1 F-box protein PP2-B15, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3690.11Show/hide
Query:  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKK
        MAGISSIGVLPEDCVSAILSLTTP+DAGKLSLVSS FRSAAESDVVW RFLPKNYAEI+AAS+ISGE PL SKRE FFRLCSPIL+DGGKK
Subjt:  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKK

KAG6599216.1 F-box protein PP2-B15, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3690.11Show/hide
Query:  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKK
        MAGISSIGVLPEDCVSAILSLTTP+DAGKLSLVSS FRSAAESDVVW RFLPKNYAEI+AAS+ISGE PL SKRE FFRLCSPIL+DGGKK
Subjt:  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKK

KAG7030140.1 F-box protein PP2-B15, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3690.11Show/hide
Query:  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKK
        MAGISSIGVLPEDCVSAILSLTTP+DAGKLSLVSS FRSAAESDVVW RFLPKNYAEI+AAS+ISGE PL SKRE FFRLCSPIL+DGGKK
Subjt:  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKK

XP_022946535.1 F-box protein PP2-B15-like [Cucurbita moschata]3.3e-3689.01Show/hide
Query:  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKK
        MAGISSIGVLPEDCVSAILSLTTP+DAGKLSLVSS FRSAAESDVVW RFLPKNYAEI+AAS+ISGE PL SKRE FFRLCSPIL++GGKK
Subjt:  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKK

XP_023545312.1 F-box protein PP2-B15-like [Cucurbita pepo subsp. pepo]1.5e-3690.11Show/hide
Query:  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKK
        MAGISSIGVLPEDCVSAILSLTTP+DAGKLSLVSS FRSAAESDVVW RFLPKNYAEI+AAS+ISGE PL SKRE FFRLCSPIL+DGGKK
Subjt:  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKK

TrEMBL top hitse value%identityAlignment
A0A0A0LJT8 F-box domain-containing protein4.0e-3586.81Show/hide
Query:  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKK
        MAGISSIGVLPEDCVSAILSLT+PSDAGKL+LVSS FRSAAESDVVWGRFLP+NY EI+AASE+SGE PL SKRE FFRLCSPIL+D GKK
Subjt:  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKK

A0A0A0LLX5 F-box domain-containing protein1.8e-3586.81Show/hide
Query:  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKK
        MAGISSIGVLPEDC+SAILSLTTPSDAGKL+LVSS FRSAAESDVVWGRFLP+NY EI+AASE+SGE PL SKRE FFRLCSPIL+D GKK
Subjt:  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKK

A0A6J1G450 F-box protein PP2-B15-like1.6e-3689.01Show/hide
Query:  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKK
        MAGISSIGVLPEDCVSAILSLTTP+DAGKLSLVSS FRSAAESDVVW RFLPKNYAEI+AAS+ISGE PL SKRE FFRLCSPIL++GGKK
Subjt:  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKK

A0A6J1KDI1 F-box protein PP2-B15-like1.4e-3585.71Show/hide
Query:  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKK
        MAGISSIGVLPEDC+SAIL LTTP+DAGKLSLVSS FRSAAESDVVW RFLP+NYAEI+AAS+I+GE PL SKRE FFRLCSPIL+DGGKK
Subjt:  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKK

A0A6J1KF36 F-box protein PP2-B15-like8.0e-3685.71Show/hide
Query:  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKK
        MAGISSIGVLPEDC+SAILSLTTP+DAGKLSLVSS FRSAAESDVVW RFLP+NYAEI+A S+I+GE PL SKRE FFRLCSPIL+DGGKK
Subjt:  MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKK

SwissProt top hitse value%identityAlignment
O80494 F-box protein PP2-B153.7e-1446.07Show/hide
Query:  VLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKKVNKIFK
        +LPE CV+ ILS TTP+D    + VSS FR A +SD VW +FLP +Y  +++ S        SSK+E++  LC  IL+D G+K+ KI K
Subjt:  VLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKKVNKIFK

Q3E6P4 F-box protein At2g022403.7e-1444.44Show/hide
Query:  GISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLC-SPILLDGGKK
        G S   VLPEDC+S I+S T+P DA   + VS  F SA  SD VW +FLP  Y  +++ S +      +SK+E++F LC +P+L++ GKK
Subjt:  GISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLC-SPILLDGGKK

Q9C7K0 F-box protein VBF5.4e-1342.7Show/hide
Query:  VLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKKVNKIFK
        +LPE C++ IL+ T+P+DA   S VSS FR A +SD VW +FLP +Y  +++ S       +SSK+E++  LC  +L+D  +K+ KI K
Subjt:  VLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKKVNKIFK

Q9FV02 F-box protein SKIP35.4e-1342.53Show/hide
Query:  SSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCS-PILLDGGK
        S++  LPE C+S I+S T+P DA   + VS  F SA +SD+VW +FLP +Y  ++  S +      SSK+E++F LC+ P+L++ GK
Subjt:  SSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCS-PILLDGGK

Q9ZVQ9 F-box protein PP2-B71.9e-1344.83Show/hide
Query:  SIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLC-SPILLDGGKK
        S+G LPE+C+S I+S T+P DA   +LVS  F SA +SD+VW +F+P  Y  +L+ S+       SSK+E+FF LC   +L++  KK
Subjt:  SIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLC-SPILLDGGKK

Arabidopsis top hitse value%identityAlignment
AT1G09155.1 phloem protein 2-B152.7e-1546.07Show/hide
Query:  VLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKKVNKIFK
        +LPE CV+ ILS TTP+D    + VSS FR A +SD VW +FLP +Y  +++ S        SSK+E++  LC  IL+D G+K+ KI K
Subjt:  VLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKKVNKIFK

AT1G56240.1 phloem protein 2-B136.5e-1443.82Show/hide
Query:  VLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKKVNKIFK
        +LPE CV+ IL+ T+P+DA   S VSS FR A +SD VW +FLP +Y  +++ S        SSK+E++  LC  +L+D  +K+ KI K
Subjt:  VLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKKVNKIFK

AT1G56250.1 phloem protein 2-B143.8e-1442.7Show/hide
Query:  VLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKKVNKIFK
        +LPE C++ IL+ T+P+DA   S VSS FR A +SD VW +FLP +Y  +++ S       +SSK+E++  LC  +L+D  +K+ KI K
Subjt:  VLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKKVNKIFK

AT2G02240.1 F-box family protein2.7e-1544.44Show/hide
Query:  GISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLC-SPILLDGGKK
        G S   VLPEDC+S I+S T+P DA   + VS  F SA  SD VW +FLP  Y  +++ S +      +SK+E++F LC +P+L++ GKK
Subjt:  GISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLC-SPILLDGGKK

AT2G02320.1 phloem protein 2-B71.3e-1444.83Show/hide
Query:  SIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLC-SPILLDGGKK
        S+G LPE+C+S I+S T+P DA   +LVS  F SA +SD+VW +F+P  Y  +L+ S+       SSK+E+FF LC   +L++  KK
Subjt:  SIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLC-SPILLDGGKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGAATTTCGAGCATCGGAGTGTTGCCGGAGGACTGTGTTTCGGCGATTCTGTCACTCACAACTCCCTCCGACGCCGGGAAATTATCCCTCGTCTCGTCGGCGTT
TCGGTCGGCGGCGGAATCAGACGTCGTTTGGGGCAGATTTTTGCCGAAAAACTACGCCGAAATTCTGGCAGCGTCTGAAATCTCCGGCGAGTGTCCATTGAGTTCGAAGA
GAGAGGTTTTCTTCCGACTCTGTTCTCCGATACTTCTGGACGGCGGTAAAAAGGTAAATAAAATTTTCAAGTCCGTAAAATTTTTGGGTATTCCATTTTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGAATTTCGAGCATCGGAGTGTTGCCGGAGGACTGTGTTTCGGCGATTCTGTCACTCACAACTCCCTCCGACGCCGGGAAATTATCCCTCGTCTCGTCGGCGTT
TCGGTCGGCGGCGGAATCAGACGTCGTTTGGGGCAGATTTTTGCCGAAAAACTACGCCGAAATTCTGGCAGCGTCTGAAATCTCCGGCGAGTGTCCATTGAGTTCGAAGA
GAGAGGTTTTCTTCCGACTCTGTTCTCCGATACTTCTGGACGGCGGTAAAAAGGTAAATAAAATTTTCAAGTCCGTAAAATTTTTGGGTATTCCATTTTGTTAG
Protein sequenceShow/hide protein sequence
MAGISSIGVLPEDCVSAILSLTTPSDAGKLSLVSSAFRSAAESDVVWGRFLPKNYAEILAASEISGECPLSSKREVFFRLCSPILLDGGKKVNKIFKSVKFLGIPFC