| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6586224.1 RNA pseudouridine synthase 1, partial [Cucurbita argyrosperma subsp. sororia] | 1.2e-165 | 82.23 | Show/hide |
Query: MALFIALQPTFSIPYKTFTKFPFPKPFCFHRFKSVSNSMADSSEPVTGNCPSTRENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEW
MAL + LQ FSIP K+F K FPKPF FHRF+ V+NSMADSS+PVTG ENYPVPLSPPLPAISKNLELARAMAA SKSSLF+LSA DV+YEDEW
Subjt: MALFIALQPTFSIPYKTFTKFPFPKPFCFHRFKSVSNSMADSSEPVTGNCPSTRENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEW
Query: LIAVNKPQGIYCESVLAAVPRLLGDSAMAG-----IKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKS
LIAVNKPQG+YCESVLA+VP LGDSAMAG IK SLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDH VSKSYIAFCVGSAPKWKKI VKS
Subjt: LIAVNKPQGIYCESVLAAVPRLLGDSAMAG-----IKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKS
Query: GHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFRKD------EEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLH
GHGRSKFGVWRVYAAADVGRSLPGGS+VRDMET FEVLS+ G+N E+ + RKD EEETIV Q KSL+DID +KDEILIRARPRSGRTHQIRLH
Subjt: GHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFRKD------EEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLH
Query: CQYLGIPIRGDVKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQQEVNSPPSFKPMP
QYLGIPI GDVKYEGVTEWNGK YDSHELHAESLYFVHPVTGIPLKLQAPLPSWA+QALQPQQQEVNS S KPMP
Subjt: CQYLGIPIRGDVKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQQEVNSPPSFKPMP
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| KAG7021056.1 RNA pseudouridine synthase 1, partial [Cucurbita argyrosperma subsp. argyrosperma] | 4.3e-168 | 83.2 | Show/hide |
Query: MALFIALQPTFSIPYKTFTKFPFPKPFCFHRFKSVSNSMADSSEPVTGNCPSTRENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEW
MAL + +QP FSIP+K+F K FPKPF FHRF+ V+NSMADSS+PVTG ENYPVPLSPPLPAISKNLELARAMAA SKSSLF+LSA DVIYEDEW
Subjt: MALFIALQPTFSIPYKTFTKFPFPKPFCFHRFKSVSNSMADSSEPVTGNCPSTRENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEW
Query: LIAVNKPQGIYCESVLAAVPRLLGDSAMAG-----IKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKS
LIAVNKPQG+YCESVLA+VPR LGDSAMAG IK SLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDH VSKSYIAFCVGSAPKWKKI VKS
Subjt: LIAVNKPQGIYCESVLAAVPRLLGDSAMAG-----IKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKS
Query: GHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFRKD----EEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQ
GHGRSKFGVWRVYAAADVGRSLPGGS+VRDMET FEVLS+ G+N E+ + RKD EEETIV Q KSL+DID +KDEILIRARPRSGRTHQIRLH Q
Subjt: GHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFRKD----EEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQ
Query: YLGIPIRGDVKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQQEVNSPPSFKPMP
YLGIPI GDVKYEGVTEWNGK YDSHELHAESLYFVHPVTGIPLKLQAPLPSWA+QALQPQQQEVNS S KPMP
Subjt: YLGIPIRGDVKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQQEVNSPPSFKPMP
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| XP_004144814.3 RNA pseudouridine synthase 1 [Cucumis sativus] | 1.9e-187 | 90.71 | Show/hide |
Query: MALFIALQPTFSIPYKTFTKFPFPKPFCFHRFKSVSNSMADSSEPVTGNCPSTRENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEW
MALFI+L P FSI KTFT+FPF K FCFHRFKSVSNSM DSSEPVTGNCPST ENYPVPLSPPLPAISKNLELARAM ASSKSSL+ALSANDVIYEDEW
Subjt: MALFIALQPTFSIPYKTFTKFPFPKPFCFHRFKSVSNSMADSSEPVTGNCPSTRENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEW
Query: LIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKSGHGRS
LIAVNKPQGIYCE+VLAAVPRLLGDSA AGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVG++PKWKKINVKSGHGRS
Subjt: LIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKSGHGRS
Query: KFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYLGIPIRGD
KFGVWRVYAAADVGRSLPGGS+VRDMETYFEVLS+ GKN ME+ +KFR+ EEETIVV KSLVDID KDEILIRARPRSGRTHQIRLHCQYLGIPIRGD
Subjt: KFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYLGIPIRGD
Query: VKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQQEVNSPPSFKPMP
VKYEGVTEWN K YDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQ EVNSP SFK MP
Subjt: VKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQQEVNSPPSFKPMP
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| XP_008453651.1 PREDICTED: RNA pseudouridine synthase 1 [Cucumis melo] | 8.4e-172 | 92.68 | Show/hide |
Query: MADSSEPVTGNCPSTRENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPEL
M DSSEPVTGNCPST ENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCE+VLAAVPRLL DSA AGIKT+LPEL
Subjt: MADSSEPVTGNCPSTRENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPEL
Query: HLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGK
HLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVG++PKWKKI+VKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLS+ GK
Subjt: HLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGK
Query: NAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQ
N ME+ +KFRK+EEETIVV KSLVDID QKDE+LIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGK YDSHELHAESLYFVHP+TGIPLKLQ
Subjt: NAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQ
Query: APLPSWASQALQPQQQEVNSPPSFKPMP
APLPSWASQALQPQQQEVNSP SFK MP
Subjt: APLPSWASQALQPQQQEVNSPPSFKPMP
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| XP_038889468.1 RNA pseudouridine synthase 1 [Benincasa hispida] | 7.8e-186 | 92.48 | Show/hide |
Query: MALFIALQPTFSIPYKTFTKFPFPKPFCFHRFKSVSNSMADSSEPVTGNCPSTRENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEW
MAL I+LQPTFS P+KTFT+ FPKPFC RFKS+S SMADSSEPVTGNCPSTRENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEW
Subjt: MALFIALQPTFSIPYKTFTKFPFPKPFCFHRFKSVSNSMADSSEPVTGNCPSTRENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEW
Query: LIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKSGHGRS
LIAVNKPQGIYCESVLAAVPRLL DSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKIN+KSGHGRS
Subjt: LIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKSGHGRS
Query: KFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYLGIPIRGD
KFGVWRVYAAADVGRSLPGGS+VRDMETYFEVLSI G+NAME+ +KF KD EET+VVQ KSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYLGIPIRGD
Subjt: KFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYLGIPIRGD
Query: VKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQQEVNSP
VKYEGVTEWNGK YD HELHAESLYFVHP+TGIPLKLQAPLPSWASQA QPQQQEVNSP
Subjt: VKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQQEVNSP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LJY6 PseudoU_synth_2 domain-containing protein | 9.0e-188 | 90.71 | Show/hide |
Query: MALFIALQPTFSIPYKTFTKFPFPKPFCFHRFKSVSNSMADSSEPVTGNCPSTRENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEW
MALFI+L P FSI KTFT+FPF K FCFHRFKSVSNSM DSSEPVTGNCPST ENYPVPLSPPLPAISKNLELARAM ASSKSSL+ALSANDVIYEDEW
Subjt: MALFIALQPTFSIPYKTFTKFPFPKPFCFHRFKSVSNSMADSSEPVTGNCPSTRENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEW
Query: LIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKSGHGRS
LIAVNKPQGIYCE+VLAAVPRLLGDSA AGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVG++PKWKKINVKSGHGRS
Subjt: LIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKSGHGRS
Query: KFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYLGIPIRGD
KFGVWRVYAAADVGRSLPGGS+VRDMETYFEVLS+ GKN ME+ +KFR+ EEETIVV KSLVDID KDEILIRARPRSGRTHQIRLHCQYLGIPIRGD
Subjt: KFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYLGIPIRGD
Query: VKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQQEVNSPPSFKPMP
VKYEGVTEWN K YDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQ EVNSP SFK MP
Subjt: VKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQALQPQQQEVNSPPSFKPMP
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| A0A1S3BW87 RNA pseudouridine synthase 1 | 4.1e-172 | 92.68 | Show/hide |
Query: MADSSEPVTGNCPSTRENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPEL
M DSSEPVTGNCPST ENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCE+VLAAVPRLL DSA AGIKT+LPEL
Subjt: MADSSEPVTGNCPSTRENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPEL
Query: HLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGK
HLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVG++PKWKKI+VKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLS+ GK
Subjt: HLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGK
Query: NAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQ
N ME+ +KFRK+EEETIVV KSLVDID QKDE+LIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGK YDSHELHAESLYFVHP+TGIPLKLQ
Subjt: NAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQ
Query: APLPSWASQALQPQQQEVNSPPSFKPMP
APLPSWASQALQPQQQEVNSP SFK MP
Subjt: APLPSWASQALQPQQQEVNSPPSFKPMP
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| A0A5A7TX25 RNA pseudouridine synthase 1 | 4.1e-172 | 92.68 | Show/hide |
Query: MADSSEPVTGNCPSTRENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPEL
M DSSEPVTGNCPST ENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCE+VLAAVPRLL DSA AGIKT+LPEL
Subjt: MADSSEPVTGNCPSTRENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPEL
Query: HLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGK
HLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVG++PKWKKI+VKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLS+ GK
Subjt: HLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGK
Query: NAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQ
N ME+ +KFRK+EEETIVV KSLVDID QKDE+LIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGK YDSHELHAESLYFVHP+TGIPLKLQ
Subjt: NAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQ
Query: APLPSWASQALQPQQQEVNSPPSFKPMP
APLPSWASQALQPQQQEVNSP SFK MP
Subjt: APLPSWASQALQPQQQEVNSPPSFKPMP
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| A0A6J1DQ12 RNA pseudouridine synthase 1 isoform X2 | 8.8e-159 | 86.36 | Show/hide |
Query: MADSSEPVTGNCPSTRENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMA-----GIKT
MAD S PVTGN P+T +NYP+PLSPPLPAISKNLELARAMAASSKSSLFALSA DVI+EDEWLIAVNKPQG+YCESVLA+VPRLLGDSAMA GI+
Subjt: MADSSEPVTGNCPSTRENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMA-----GIKT
Query: SLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVL
SLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDH VSKSYIAFCVGSAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGS+VRDMETYFEVL
Subjt: SLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVL
Query: SIKGKNAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKNYDSHELHAESLYFVHPVTGI
S+ G++ M++ + RKDEEETIVVQ KSL+DID KDEILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGV EWNG YDSHELHAESL+FVHPVTGI
Subjt: SIKGKNAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKNYDSHELHAESLYFVHPVTGI
Query: PLKLQAPLPSWASQALQPQQQEVNSPPSFK
PLKLQAPLPSWASQAL QQQEV+SP + K
Subjt: PLKLQAPLPSWASQALQPQQQEVNSPPSFK
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| A0A6J1DT56 RNA pseudouridine synthase 1 isoform X1 | 1.3e-157 | 83.82 | Show/hide |
Query: MADSSEPVTGNCPSTRENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAG--------
MAD S PVTGN P+T +NYP+PLSPPLPAISKNLELARAMAASSKSSLFALSA DVI+EDEWLIAVNKPQG+YCESVLA+VPRLLGDSAMAG
Subjt: MADSSEPVTGNCPSTRENYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAG--------
Query: -------IKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIV
I+ SLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDH VSKSYIAFCVGSAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGS+V
Subjt: -------IKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIV
Query: RDMETYFEVLSIKGKNAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKNYDSHELHAES
RDMETYFEVLS+ G++ M++ + RKDEEETIVVQ KSL+DID KDEILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGV EWNG YDSHELHAES
Subjt: RDMETYFEVLSIKGKNAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKNYDSHELHAES
Query: LYFVHPVTGIPLKLQAPLPSWASQALQPQQQEVNSPPSFK
L+FVHPVTGIPLKLQAPLPSWASQAL QQQEV+SP + K
Subjt: LYFVHPVTGIPLKLQAPLPSWASQALQPQQQEVNSPPSFK
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| SwissProt top hits | e value | %identity | Alignment |
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| Q2QNM3 RNA pseudouridine synthase 1 | 2.3e-100 | 61.36 | Show/hide |
Query: YPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITK
YPVP+SPP PA SK++EL RAM AS++S+ A S+ V++EDEWL V+KP G+YC+++L+A+P +A G + + P LHLANRLDRDTSG+MVITK
Subjt: YPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITK
Query: SHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFRKDEEETIV
+KVA KLVKAFT+H V K+Y+A C+G P W+KI + SGHGRSK G WRVYA +DVGRSLPGGS+VRDM T FEVL I GK + F DE E+I
Subjt: SHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFRKDEEETIV
Query: VQIKSLVDIDGQKDE----ILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQ
VQ K+ D+ DE IL+RA P+SGRTHQIRLHCQYLG PIRGDVKY GV EWNG +YD H LHAESL FVHPVTG+P+ ++PLPSWA++
Subjt: VQIKSLVDIDGQKDE----ILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQ
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| Q68XB2 Ribosomal large subunit pseudouridine synthase C | 2.2e-18 | 31.64 | Show/hide |
Query: VIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINV
+IYED+ LIA+NKP + + + L DSA+ + + L +RLD++TSG+++I K++ + KL AF + V K Y A G K I V
Subjt: VIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINV
Query: KSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYL
KS G+SK R++ D+ S GK A+ T +KSL + LI P +GR HQ+RLH Q L
Subjt: KSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYL
Query: GIPIRGDVKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQAL
G PI GD KY Y LHA ++Y + G +KL+A LP + ++ L
Subjt: GIPIRGDVKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQAL
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| Q7XA65 RNA pseudouridine synthase 1 | 2.2e-98 | 61.22 | Show/hide |
Query: NYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVIT
NYP P+S P P ISK++EL RAM ASSKSSLF L+ +D++YEDE+L+AVNKP+G+YCE+VL + P+++ DS+ E HLANRLDRDTSGVM+IT
Subjt: NYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVIT
Query: KSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKG-KNAMEDCKKFRKDEEET
KSHKVA+KLVKAFT+H + KSYIA C+GS+P W+++ V SGHGRSK G WRVYAA DVGR LPGGS VRDMET FEV+S+ KN E C+ +D
Subjt: KSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKG-KNAMEDCKKFRKDEEET
Query: IVVQIKSLVDIDGQKDE--ILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQAPLPSWAS
IV + + + G D+ +++RA PRSGRTHQIRLHCQYLGIPIRGDVKY GV EWNG+ ++ HELHAE L HPVTG + ++APLP WA+
Subjt: IVVQIKSLVDIDGQKDE--ILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQAPLPSWAS
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| Q87S65 Ribosomal large subunit pseudouridine synthase D | 7.2e-17 | 26.37 | Show/hide |
Query: DVIYEDEWLIAVNKPQ--------GIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGS
D++YED+ +I +NKP+ G +VL A+ D A +P + +RLD+DT+G+MV+ K+ ++LV+A +++ Y A +G
Subjt: DVIYEDEWLIAVNKPQ--------GIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGS
Query: APKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTH
K++ G +K + A A +G+ P + R E + ++ IR R +GRTH
Subjt: APKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTH
Query: QIRLHCQYLGIPIRGDVKYEG-----------VTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQAPLPS---WASQALQPQQQEVNSPPSF
QIR+H YL P+ GD Y G +T+ + +D LHA L F HP+TG L+ AP+P ++AL+ +E P F
Subjt: QIRLHCQYLGIPIRGDVKYEG-----------VTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQAPLPS---WASQALQPQQQEVNSPPSF
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| Q9ZDR7 Ribosomal large subunit pseudouridine synthase C | 6.5e-18 | 30.47 | Show/hide |
Query: VIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINV
+IYED+ LIA+NKP + + + L DSA+ + + L +RLD++TSG+++I K++ + KL AF + V K Y A G P V
Subjt: VIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINV
Query: KSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYL
KS G+SK R + + S GK A+ T +KSL + LI P +GR HQ+RLH Q L
Subjt: KSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYL
Query: GIPIRGDVKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQAL
G PI GD KY Y LHA ++Y + G +KL+A LP + ++ +
Subjt: GIPIRGDVKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQAPLPSWASQAL
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G56345.1 Pseudouridine synthase family protein | 1.6e-99 | 61.22 | Show/hide |
Query: NYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVIT
NYP P+S P P ISK++EL RAM ASSKSSLF L+ +D++YEDE+L+AVNKP+G+YCE+VL + P+++ DS+ E HLANRLDRDTSGVM+IT
Subjt: NYPVPLSPPLPAISKNLELARAMAASSKSSLFALSANDVIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPELHLANRLDRDTSGVMVIT
Query: KSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKG-KNAMEDCKKFRKDEEET
KSHKVA+KLVKAFT+H + KSYIA C+GS+P W+++ V SGHGRSK G WRVYAA DVGR LPGGS VRDMET FEV+S+ KN E C+ +D
Subjt: KSHKVASKLVKAFTDHTVSKSYIAFCVGSAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKG-KNAMEDCKKFRKDEEET
Query: IVVQIKSLVDIDGQKDE--ILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQAPLPSWAS
IV + + + G D+ +++RA PRSGRTHQIRLHCQYLGIPIRGDVKY GV EWNG+ ++ HELHAE L HPVTG + ++APLP WA+
Subjt: IVVQIKSLVDIDGQKDE--ILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNGKNYDSHELHAESLYFVHPVTGIPLKLQAPLPSWAS
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| AT1G76050.2 Pseudouridine synthase family protein | 3.2e-12 | 25.45 | Show/hide |
Query: LANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVG-SAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGK
+ +RLD+ T+G++V+ K + L + F HT+ + Y++ G +P +I + G S R+ AA +PGG ++G
Subjt: LANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVG-SAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGK
Query: NAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEG-------VTEWNGKNYDSHE------------L
A +++ +++ L+ R +GRTHQIR H +Y+G+P+ GD Y G + + D E L
Subjt: NAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRTHQIRLHCQYLGIPIRGDVKYEG-------VTEWNGKNYDSHE------------L
Query: HAESLYFVHPVTGIPLKLQAPLPS
HA L F HP TG +K P PS
Subjt: HAESLYFVHPVTGIPLKLQAPLPS
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| AT3G19440.1 Pseudouridine synthase family protein | 5.7e-09 | 28.57 | Show/hide |
Query: VIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPEL-------------HLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAF
V+Y+D +I +NKP G L +GIKTS+ EL L +RLDRD SG++V+ ++ A+ L F + T
Subjt: VIYEDEWLIAVNKPQGIYCESVLAAVPRLLGDSAMAGIKTSLPEL-------------HLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAF
Query: CVGSAPKWKKINVKSGHGRSKFGVWRVYAAADVG-RSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFR---KDEEETIVVQ---IKSLVDIDGQKDEIL
G++ K NVKS + R Y A +G G I + K ++D K R D E + Q + V
Subjt: CVGSAPKWKKINVKSGHGRSKFGVWRVYAAADVG-RSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFR---KDEEETIVVQ---IKSLVDIDGQKDEIL
Query: IRARPRSGRTHQIRLHC-QYLGIPIRGDVKY
+ RP +GR HQ+R+HC + LG PI GD KY
Subjt: IRARPRSGRTHQIRLHC-QYLGIPIRGDVKY
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| AT3G52260.1 Pseudouridine synthase family protein | 8.2e-08 | 24.77 | Show/hide |
Query: DVIYEDEWLIAVNKPQGIYC--------ESVLAAVPRLLG-DSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVG
+V+YED+ LIA+NKP G+ +VL + G + + G + S P +RL R TSG+++ K+ +KL F + T VG
Subjt: DVIYEDEWLIAVNKPQGIYC--------ESVLAAVPRLLG-DSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVG
Query: SAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRT
S ++ + G GR + + R+L G + D + + + + E + ++ +++ D +K+ L++ +SGR
Subjt: SAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRT
Query: HQIRLHCQYLGIPI
HQIR+H Y+G P+
Subjt: HQIRLHCQYLGIPI
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| AT3G52260.2 Pseudouridine synthase family protein | 2.6e-09 | 25.45 | Show/hide |
Query: DVIYEDEWLIAVNKPQGIYC--------ESVLAAVPRLLG-DSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVG
+V+YED+ LIA+NKP G+ +VL + G + + G + S P +RL R TSG+++ K+ +KL F + T VG
Subjt: DVIYEDEWLIAVNKPQGIYC--------ESVLAAVPRLLG-DSAMAGIKTSLPELHLANRLDRDTSGVMVITKSHKVASKLVKAFTDHTVSKSYIAFCVG
Query: SAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRT
S ++ + G GR + + R+L G + D + + + + E + ++ +++ D +K+ L++ +SGR
Subjt: SAPKWKKINVKSGHGRSKFGVWRVYAAADVGRSLPGGSIVRDMETYFEVLSIKGKNAMEDCKKFRKDEEETIVVQIKSLVDIDGQKDEILIRARPRSGRT
Query: HQIRLHCQYLGIPIRGDVKY
HQIR+H Y+G P+ GD Y
Subjt: HQIRLHCQYLGIPIRGDVKY
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