; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G006400 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G006400
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRNA polymerase II-associated protein 3 isoform X1
Genome locationchr11:6742412..6750165
RNA-Seq ExpressionLsi11G006400
SyntenyLsi11G006400
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001440 - Tetratricopeptide repeat 1
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR019734 - Tetratricopeptide repeat
IPR025986 - RNA-polymerase II-associated protein 3-like, C-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453348.2 PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Cucumis melo]3.9e-20778.63Show/hide
Query:  VIFFALAQSAGILQILNPRRKLRPANGSDSVELLDASRSSFEDQLLQFSIFSFFVWILLFFCSPMADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKK
        ++FFALAQS   ++I             + +  L  + S        FS++S  ++ L FFCS MADSSGKHGRD PLDFQGFLNDLQDWE+SFKGKDKK
Subjt:  VIFFALAQSAGILQILNPRRKLRPANGSDSVELLDASRSSFEDQLLQFSIFSFFVWILLFFCSPMADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKK

Query:  LKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTA-----------------EAE
        LKPQA GKEKE R Q EKASAADYLK YDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTA                 EAE
Subjt:  LKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTA-----------------EAE

Query:  DDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKAILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPS
        DDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEP+NQEIKKQHA+LRAFVGKAILEKASGASRS  KDK  ++KSDS AK QDIPP  S
Subjt:  DDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKAILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPS

Query:  STPRTELSAAQERSEVKENGGENAVKSSARLEENDDRSTGAEISFKSVATNGFHKDSSSYLGALERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIA
        ST RT L AA+ER  V+ENGGENAVK+SAR+EEN+D ST AEI+ K VATNGFHKDSSSYL ALERD +PRK ELK SVQELAS+AASRSMVEAAKNIIA
Subjt:  STPRTELSAAQERSEVKENGGENAVKSSARLEENDDRSTGAEISFKSVATNGFHKDSSSYLGALERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIA

Query:  PTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVF
        PTTAYQFEVSWRGFS D ALQA LLK ISP KLPQIFKNALTAPILIDIVKCVATFFTEEPALAIS LENL KVPRFSILMMCL SSEKFDLLKIWDEVF
Subjt:  PTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVF

Query:  CDEAVPIEYAEMLDSLRSKYFTKQ
        CDEAVPIEYAEMLDSLRSKYF KQ
Subjt:  CDEAVPIEYAEMLDSLRSKYFTKQ

XP_038890653.1 RNA polymerase II-associated protein 3 isoform X1 [Benincasa hispida]1.4e-21286.54Show/hide
Query:  MADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKKLKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSSGKHGRDQP+DFQGFLNDLQDWELSFKGKDKKLKPQA  KEKEGR Q EKASAADYLKHYDAVNRLSRNFQT+QSFVDAASEKEQGNEYFKQKKFK
Subjt:  MADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKKLKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTA-----------------EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKA
        EAIDCYSRSIALSPTA                 EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDA+FAQRLEPHNQEIKKQHAELRAFVGKA
Subjt:  EAIDCYSRSIALSPTA-----------------EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKA

Query:  ILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVK--------ENGGENAVKSSARLEENDDRSTGAEISFKSVATNGFHKD
        ILEKASGASRS TKDK TVRKSDS+AK +DIPP  SSTPRT LSAA+ER +VK        ENGGENA K+SA LEEN+DRSTGAEI++K VATNGFHKD
Subjt:  ILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVK--------ENGGENAVKSSARLEENDDRSTGAEISFKSVATNGFHKD

Query:  SSSYLGALERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATF
        SSSY G LERD VPRKQELKPSVQE AS AASRSMVEAAKNIIAPTTAYQFEVSWRGFSGD  LQARLLKAI+P KLPQIFKNALTAPIL+DIVKCVA F
Subjt:  SSSYLGALERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATF

Query:  FTEEPALAISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFTKQ
        FTEEPALAIS LENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYF KQ
Subjt:  FTEEPALAISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFTKQ

XP_038890654.1 RNA polymerase II-associated protein 3 isoform X2 [Benincasa hispida]8.7e-21588.04Show/hide
Query:  MADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKKLKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSSGKHGRDQP+DFQGFLNDLQDWELSFKGKDKKLKPQA  KEKEGR Q EKASAADYLKHYDAVNRLSRNFQT+QSFVDAASEKEQGNEYFKQKKFK
Subjt:  MADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKKLKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTA-----------------EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKA
        EAIDCYSRSIALSPTA                 EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDA+FAQRLEPHNQEIKKQHAELRAFVGKA
Subjt:  EAIDCYSRSIALSPTA-----------------EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKA

Query:  ILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVKENGGENAVKSSARLEENDDRSTGAEISFKSVATNGFHKDSSSYLGAL
        ILEKASGASRS TKDK TVRKSDS+AK +DIPP  SSTPRT LSAA+ER +VKENGGENA K+SA LEEN+DRSTGAEI++K VATNGFHKDSSSY G L
Subjt:  ILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVKENGGENAVKSSARLEENDDRSTGAEISFKSVATNGFHKDSSSYLGAL

Query:  ERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATFFTEEPALA
        ERD VPRKQELKPSVQE AS AASRSMVEAAKNIIAPTTAYQFEVSWRGFSGD  LQARLLKAI+P KLPQIFKNALTAPIL+DIVKCVA FFTEEPALA
Subjt:  ERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATFFTEEPALA

Query:  ISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFTKQ
        IS LENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYF KQ
Subjt:  ISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFTKQ

XP_038890655.1 RNA polymerase II-associated protein 3 isoform X3 [Benincasa hispida]8.1e-21387.83Show/hide
Query:  MADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKKLKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSSGKHGRDQP+DFQGFLNDLQDWELSFKGKDKKLKPQA  KEKEGR Q EKASAADYLKHYDAVNRLSRNFQT+QSFVDAASEKEQGNEYFKQKKFK
Subjt:  MADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKKLKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTA-----------------EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKA
        EAIDCYSRSIALSPTA                 EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDA+FAQRLEPHNQEIKKQHAELRAFVGKA
Subjt:  EAIDCYSRSIALSPTA-----------------EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKA

Query:  ILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVKENGGENAVKSSARLEENDDRSTGAEISFKSVATNGFHKDSSSYLGAL
        ILEKASGASRS TKDK TVRKSDS+AK +DIPP  SSTPRT LSAA+ER  V ENGGENA K+SA LEEN+DRSTGAEI++K VATNGFHKDSSSY G L
Subjt:  ILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVKENGGENAVKSSARLEENDDRSTGAEISFKSVATNGFHKDSSSYLGAL

Query:  ERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATFFTEEPALA
        ERD VPRKQELKPSVQE AS AASRSMVEAAKNIIAPTTAYQFEVSWRGFSGD  LQARLLKAI+P KLPQIFKNALTAPIL+DIVKCVA FFTEEPALA
Subjt:  ERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATFFTEEPALA

Query:  ISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFTKQ
        IS LENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYF KQ
Subjt:  ISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFTKQ

XP_038890656.1 RNA polymerase II-associated protein 3 isoform X4 [Benincasa hispida]6.9e-20484.4Show/hide
Query:  MADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKKLKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSSGKHGRDQP+          DWELSFKGKDKKLKPQA  KEKEGR Q EKASAADYLKHYDAVNRLSRNFQT+QSFVDAASEKEQGNEYFKQKKFK
Subjt:  MADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKKLKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTA-----------------EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKA
        EAIDCYSRSIALSPTA                 EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDA+FAQRLEPHNQEIKKQHAELRAFVGKA
Subjt:  EAIDCYSRSIALSPTA-----------------EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKA

Query:  ILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVK--------ENGGENAVKSSARLEENDDRSTGAEISFKSVATNGFHKD
        ILEKASGASRS TKDK TVRKSDS+AK +DIPP  SSTPRT LSAA+ER +VK        ENGGENA K+SA LEEN+DRSTGAEI++K VATNGFHKD
Subjt:  ILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVK--------ENGGENAVKSSARLEENDDRSTGAEISFKSVATNGFHKD

Query:  SSSYLGALERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATF
        SSSY G LERD VPRKQELKPSVQE AS AASRSMVEAAKNIIAPTTAYQFEVSWRGFSGD  LQARLLKAI+P KLPQIFKNALTAPIL+DIVKCVA F
Subjt:  SSSYLGALERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATF

Query:  FTEEPALAISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFTKQ
        FTEEPALAIS LENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYF KQ
Subjt:  FTEEPALAISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFTKQ

TrEMBL top hitse value%identityAlignment
A0A0A0LGI8 Uncharacterized protein7.0e-20284.78Show/hide
Query:  MADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKKLKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSS KHGRDQ LDFQGFLNDLQDWE+SFKGKDKKLKPQA GKEKE R Q EKASAADY+K YDAVNRLSRNFQTE SFVDAASEKEQGNEYFKQKKFK
Subjt:  MADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKKLKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTA-----------------EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKA
        EAIDCYSRSIALSPTA                 EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEP+NQEIKKQHA+LRAFVGKA
Subjt:  EAIDCYSRSIALSPTA-----------------EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKA

Query:  ILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVKENGGENAVKSSARLEENDDRSTGAEISFKSVATNGFHKDSSSYLGAL
        ILEKASGASRS TK+K T++KSDS AK QDIPP  SST RT L AA+ER  V+ENGG NAVK+SARLEE++D S+GAEI+ K VATNGFHKDSSSYL AL
Subjt:  ILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVKENGGENAVKSSARLEENDDRSTGAEISFKSVATNGFHKDSSSYLGAL

Query:  ERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATFFTEEPALA
        ERD +PRKQELK SV ELAS+AASRSMVEAAKNIIAPTTAYQFEVSWRGFSGD ALQARLLK ISP KLPQIFK+ALTAPILIDIVKCVATFF EEPALA
Subjt:  ERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATFFTEEPALA

Query:  ISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFTKQ
        IS LENL  VPRFSILMMCL SSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYF KQ
Subjt:  ISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFTKQ

A0A1S3BVH1 RNA polymerase II-associated protein 3 isoform X29.4e-19976.72Show/hide
Query:  VIFFALAQSAGILQILNPRRKLRPANGSDSVELLDASRSSFEDQLLQFSIFSFFVWILLFFCSPMADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKK
        ++FFALAQS   ++I             + +  L  + S        FS++S  ++ L FFCS MADSSGKHGRD PL          DWE+SFKGKDKK
Subjt:  VIFFALAQSAGILQILNPRRKLRPANGSDSVELLDASRSSFEDQLLQFSIFSFFVWILLFFCSPMADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKK

Query:  LKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTA-----------------EAE
        LKPQA GKEKE R Q EKASAADYLK YDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTA                 EAE
Subjt:  LKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTA-----------------EAE

Query:  DDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKAILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPS
        DDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEP+NQEIKKQHA+LRAFVGKAILEKASGASRS  KDK  ++KSDS AK QDIPP  S
Subjt:  DDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKAILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPS

Query:  STPRTELSAAQERSEVKENGGENAVKSSARLEENDDRSTGAEISFKSVATNGFHKDSSSYLGALERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIA
        ST RT L AA+ER  V+ENGGENAVK+SAR+EEN+D ST AEI+ K VATNGFHKDSSSYL ALERD +PRK ELK SVQELAS+AASRSMVEAAKNIIA
Subjt:  STPRTELSAAQERSEVKENGGENAVKSSARLEENDDRSTGAEISFKSVATNGFHKDSSSYLGALERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIA

Query:  PTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVF
        PTTAYQFEVSWRGFS D ALQA LLK ISP KLPQIFKNALTAPILIDIVKCVATFFTEEPALAIS LENL KVPRFSILMMCL SSEKFDLLKIWDEVF
Subjt:  PTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVF

Query:  CDEAVPIEYAEMLDSLRSKYFTKQ
        CDEAVPIEYAEMLDSLRSKYF KQ
Subjt:  CDEAVPIEYAEMLDSLRSKYFTKQ

A0A1S3BWU0 RNA polymerase II-associated protein 3 isoform X11.9e-20778.63Show/hide
Query:  VIFFALAQSAGILQILNPRRKLRPANGSDSVELLDASRSSFEDQLLQFSIFSFFVWILLFFCSPMADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKK
        ++FFALAQS   ++I             + +  L  + S        FS++S  ++ L FFCS MADSSGKHGRD PLDFQGFLNDLQDWE+SFKGKDKK
Subjt:  VIFFALAQSAGILQILNPRRKLRPANGSDSVELLDASRSSFEDQLLQFSIFSFFVWILLFFCSPMADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKK

Query:  LKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTA-----------------EAE
        LKPQA GKEKE R Q EKASAADYLK YDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTA                 EAE
Subjt:  LKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTA-----------------EAE

Query:  DDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKAILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPS
        DDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEP+NQEIKKQHA+LRAFVGKAILEKASGASRS  KDK  ++KSDS AK QDIPP  S
Subjt:  DDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKAILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPS

Query:  STPRTELSAAQERSEVKENGGENAVKSSARLEENDDRSTGAEISFKSVATNGFHKDSSSYLGALERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIA
        ST RT L AA+ER  V+ENGGENAVK+SAR+EEN+D ST AEI+ K VATNGFHKDSSSYL ALERD +PRK ELK SVQELAS+AASRSMVEAAKNIIA
Subjt:  STPRTELSAAQERSEVKENGGENAVKSSARLEENDDRSTGAEISFKSVATNGFHKDSSSYLGALERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIA

Query:  PTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVF
        PTTAYQFEVSWRGFS D ALQA LLK ISP KLPQIFKNALTAPILIDIVKCVATFFTEEPALAIS LENL KVPRFSILMMCL SSEKFDLLKIWDEVF
Subjt:  PTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVF

Query:  CDEAVPIEYAEMLDSLRSKYFTKQ
        CDEAVPIEYAEMLDSLRSKYF KQ
Subjt:  CDEAVPIEYAEMLDSLRSKYFTKQ

A0A6J1DUX9 RNA polymerase II-associated protein 37.5e-19682.03Show/hide
Query:  MADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKKLKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSSGKHGRD  LDFQGFLND+QDWELS KGKDKKLKPQA GKEKEGR +AEKASAADYLKHYDAVN LSRNFQTEQSFVDAASEKE+GNEYFKQKKFK
Subjt:  MADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKKLKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTA-----------------EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKA
        EAIDCYSRSIALSPTA                 EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGK+
Subjt:  EAIDCYSRSIALSPTA-----------------EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKA

Query:  ILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVKENGGENAVKSSARLEENDDRSTGAEISFKSVATNGFHKDSSS--YLG
        ILEKASGASRS ++DK  V KSDS+AK QD+ P  SST RT L AAQE   ++EN  + AVK+S RL++ +DRS  AEI +K  ATNGFHKD+S    LG
Subjt:  ILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVKENGGENAVKSSARLEENDDRSTGAEISFKSVATNGFHKDSSS--YLG

Query:  ALERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATFFTEEPA
         LER+ V RKQELKPSVQELASRAASRSMVEAAKNI APTTAYQFEVSWRGFSGDCALQARLLKAISP KLPQIFKNALTAP+LIDIVKCVA+FFTEE A
Subjt:  ALERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATFFTEEPA

Query:  LAISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFTKQ
        LAI+ LENL +VPRF ILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYF KQ
Subjt:  LAISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFTKQ

A0A6J1HPT1 RNA polymerase II-associated protein 3 isoform X14.8e-19582.79Show/hide
Query:  MADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKKLKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSSGKHGRDQPLDFQGFLNDLQDWELS  G+DKKLKP A  KEKEG  Q  KA+AADY+KHYDA+N LS     EQSFVDAASEKEQGNEYFKQKKFK
Subjt:  MADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKKLKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTA-----------------EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKA
        EAI CYSRSIALSPTA                 EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEP+NQEIKKQHAELRAFVGKA
Subjt:  EAIDCYSRSIALSPTA-----------------EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKA

Query:  ILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVKENGGENAVKSSARLEENDDRSTGAEISFKSVATNGFHKDSSSYLGAL
        ILEKASGASRS TKDK  V KSDS+AK QDIPP  SST R+ LSAAQE   V+ENGGE AVK SARLE  + RSTGAEI +K  ATNG HKD +S LGAL
Subjt:  ILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVKENGGENAVKSSARLEENDDRSTGAEISFKSVATNGFHKDSSSYLGAL

Query:  ERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATFFTEEPALA
        ER+ V RKQELKPSVQELASRAASRSMVEAAKNI+APTTAYQFEVSWRGFSGD ALQARLLKAISP KLPQIFKNAL+APILIDIVKCVATFFTEE ALA
Subjt:  ERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATFFTEEPALA

Query:  ISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFTK
        IS LENLAKVPRFSILMMCLPS+EKFDLLKIWDEVFCDEAVPIEYAEMLDSLRS+YF K
Subjt:  ISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFTK

SwissProt top hitse value%identityAlignment
Q5ZKQ3 RNA polymerase II-associated protein 31.2e-1728.26Show/hide
Query:  KGKDKKLKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT---------------
        K + KK++ QA   E   + + E+A  ++  ++        R  + EQ    A +EK+ GN YFK+ K++ AI+CY+R IA   T               
Subjt:  KGKDKKLKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT---------------

Query:  ---AEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKAILEKASGASRSFTKDKGTVRKSDSK--AK
            EAE+DCT+AL LD  Y KA++RR  AR  LGK KEA++D E   +LEP N++   +  ++R      + EK       +      +++S+ K   K
Subjt:  ---AEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKAILEKASGASRSFTKDKGTVRKSDSK--AK

Query:  SQDIPPAPSSTPRTELSAAQERSEVKENGG-------ENAVKSSARLE-----ENDDRSTGAEI-SFKSVATNGFHKDSSSYLGALERDRVPRKQELKPS
            P    ST      A +E  +   N          N  K+S  +E     + DD+ T  +I   K +        SS  L A  +        L PS
Subjt:  SQDIPPAPSSTPRTELSAAQERSEVKENGG-------ENAVKSSARLE-----ENDDRSTGAEI-SFKSVATNGFHKDSSSYLGALERDRVPRKQELKPS

Query:  VQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARL-LKAISPDKLPQIFKNALTAPILIDIVKCVATFF--TEEPALAISILENLAKVP
        + +   R    S   A+     P  ++Q E  +R    DC  +  L LK I P   P++F+ +L   +   I++ +  F+   EEP+L + IL+ L+++ 
Subjt:  VQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARL-LKAISPDKLPQIFKNALTAPILIDIVKCVATFF--TEEPALAISILENLAKVP

Query:  RFSILMMCLPSSEK
        RF + +M +  SEK
Subjt:  RFSILMMCLPSSEK

Q68FQ7 RNA polymerase II-associated protein 31.1e-1827.3Show/hide
Query:  AASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT------------------AEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEP
        A +EK+ GN +FK+ K+++AI+CY+R IA   T                   EAE DCT+A+ LD  Y KA++RR TAR  LGK  EA +D E    LEP
Subjt:  AASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT------------------AEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEP

Query:  HNQEIKKQHAELRAFVGKAILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVKENG----GENAVKSSARLEEND------
         N++   + + ++    K ++EK                  DS  +   + P  S  P      A ++  ++E G      +A +SSA + E+D      
Subjt:  HNQEIKKQHAELRAFVGKAILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVKENG----GENAVKSSARLEEND------

Query:  ------DRSTGAEISFKSVATNGFHKDSSSYLGALERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTA--YQFEVSWRGFSGDCALQARLLKA
              D S G  +S          K  +    +  + +V  KQ ++ SV E  S   +++  + A  ++ P  A  +Q E  +R       +  + +K 
Subjt:  ------DRSTGAEISFKSVATNGFHKDSSSYLGALERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTA--YQFEVSWRGFSGDCALQARLLKA

Query:  ISPDKLPQIFKNALTAPILIDIVKCVATFFT--EEPALAISILENLAKVPRFSILMMCLPSSEKFDLLKI
        I P   P++F+  L   +   I+K +  F+   E+PAL   +LE L+++ RF + +M +  +E+ +L K+
Subjt:  ISPDKLPQIFKNALTAPILIDIVKCVATFFT--EEPALAISILENLAKVPRFSILMMCLPSSEKFDLLKI

Q6NU95 RNA polymerase II-associated protein 33.5e-1725.99Show/hide
Query:  RNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSI------ALSPT------------AEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEAL
        +  + +Q    A  +K+ GN YFK+ K++ AI+CYS+ +      AL P              EAE DCT A++LD  Y KA++RR TA   LGK KEA 
Subjt:  RNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSI------ALSPT------------AEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEAL

Query:  EDAEFAQRLEPHNQEIKKQHAELRAFVGKAILE--KASGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVKENGGENAVKSSARLE
        ED E   +L+P N++              A+LE  K S   RS  KD+   + S+ +     +       P    +    R  ++E GG   + +++  E
Subjt:  EDAEFAQRLEPHNQEIKKQHAELRAFVGKAILE--KASGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVKENGGENAVKSSARLE

Query:  ENDDRSTGAEISFKSVATNGFHKDSSSYLGALERDRVPRKQEL-------KPSVQE--LASRAASRSMVEAAKNI---------IAPTTAYQFEVSWRGF
         N  ++   +++ ++   +   + +      +   ++P+ +E+       +P+  E  L SR +   + +                PT ++Q E  +R  
Subjt:  ENDDRSTGAEISFKSVATNGFHKDSSSYLGALERDRVPRKQEL-------KPSVQE--LASRAASRSMVEAAKNI---------IAPTTAYQFEVSWRGF

Query:  SGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATFF--TEEPALAISILENLAKVPRFSILMMCLPSSEK
         G+  L    LK I P    ++FK AL   +  DI+  +   F   + P L   IL+ L+++ RF + +M L  S+K
Subjt:  SGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATFF--TEEPALAISILENLAKVPRFSILMMCLPSSEK

Q9D706 RNA polymerase II-associated protein 33.2e-1824.7Show/hide
Query:  KKLKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT------------------A
        +K+    T KE  G G A  A +             S+    +Q    A +EK+ GN +FK+ K+++AI+CY+R IA   T                   
Subjt:  KKLKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT------------------A

Query:  EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQE-------IKKQHAE------------LRAFVGKAILEKASGASRSFTK
        EAE DCT+A+ LD  Y KA++RR TAR  LGK  EA +D E    LEP N++       IKK+  E             R  V KA+     G+ ++   
Subjt:  EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQE-------IKKQHAE------------LRAFVGKAILEKASGASRSFTK

Query:  DKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVKENGGENAVKSSARLEENDDRSTGAEISFKSVATNGFHKDSSSYLGALERDRVPRKQELKPS
         K  + ++ +  ++ D P + ++ P ++ + A   +  K+N  E     +       DR     +  ++V+         + +G  +  R P  ++    
Subjt:  DKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVKENGGENAVKSSARLEENDDRSTGAEISFKSVATNGFHKDSSSYLGALERDRVPRKQELKPS

Query:  VQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATFF--TEEPALAISILENLAKVPR
         +++  + A+  +         P  ++Q E  +R       +  + +K I P   P++F+  L   +   I+K +  F+   E+PAL   +LE L+++ R
Subjt:  VQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATFF--TEEPALAISILENLAKVPR

Query:  FSILMMCLPSSEK
        F + +M +   E+
Subjt:  FSILMMCLPSSEK

Q9H6T3 RNA polymerase II-associated protein 31.6e-1726.12Show/hide
Query:  QAEKASAADYLKHYDAVNRLS----RNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIA------------------LSPTAEAEDDCTEALNL
        QA  +    Y K  D V + +    +  + +Q+   A SEK++GN +FK+ K++ AI+CY+R IA                  +    EAE DCT+A+ L
Subjt:  QAEKASAADYLKHYDAVNRLS----RNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIA------------------LSPTAEAEDDCTEALNL

Query:  DDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKAILEKA--SGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTEL
        D  Y KA++RR TAR  LGK  EA +D E    LEP N++   + ++++    K ++EK          T+ +  V+  D+       PP P ST   + 
Subjt:  DDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKAILEKA--SGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTEL

Query:  SAAQERSEVKENGGENAVKSSARLEENDDR------STGAEISFKSVATNGFHKDSSSYLGALERDRVPRKQELKP--SVQELASRAASRSM--------
           +E   + +        ++A  E N         +TG      S   + F    +     L+ + V     L+P  S+++   ++ S  M        
Subjt:  SAAQERSEVKENGGENAVKSSARLEENDDR------STGAEISFKSVATNGFHKDSSSYLGALERDRVPRKQELKP--SVQELASRAASRSM--------

Query:  VEAAKNIIAPTTA--YQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATFF--TEEPALAISILENLAKVPRFSILMMCLPSS
         + A  ++ P  A  +Q E  +R       +  + LK I P   P++F+  L   +   IVK +  F+   E+P L   IL+ L+++ RF + +M +  +
Subjt:  VEAAKNIIAPTTA--YQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPILIDIVKCVATFF--TEEPALAISILENLAKVPRFSILMMCLPSS

Query:  EK
        EK
Subjt:  EK

Arabidopsis top hitse value%identityAlignment
AT1G56440.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.6e-11049.79Show/hide
Query:  MADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKKLKPQATGKEKEGRGQAEKASAA--DYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKK
        MA S  KHGRDQ  DFQGF NDLQDWELS K KDKK+K Q              + +   D+ K Y ++  LS +   E S +D++SEKEQGNE+FKQKK
Subjt:  MADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKKLKPQATGKEKEGRGQAEKASAA--DYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKK

Query:  FKEAIDCYSRSIALSPTA-----------------EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVG
        F EAIDCYSRSIALSP A                 EAE DCTEALNLDDRYIKAYSRRATARKELG  KEA EDAEFA RLEP +QE+KKQ+A++++ + 
Subjt:  FKEAIDCYSRSIALSPTA-----------------EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVG

Query:  KAILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVKENGGENAVKSSARLEENDDRSTGAEISFKSVA-------------
        K I+EKA+GA +S  ++   + K+    K    P    ++    L A   R  V+   G N       +E         E S K  A             
Subjt:  KAILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVKENGGENAVKSSARLEENDDRSTGAEISFKSVA-------------

Query:  TNGFHK-----DSSSYLGALERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAP
        +  + K     D +    +   ++V ++ ELKPSVQELA+ AAS +M EA+KNI  P +AY+FE SWR FSGD AL+++LLK  +P  LPQIFKNALT+P
Subjt:  TNGFHK-----DSSSYLGALERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAP

Query:  ILIDIVKCVATFFTEEPALAISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFTKQ
        +L+DI+KCVA+FFTE+  LA+  +ENL KVPRF++L+MCL S+EK +LLKIW++VFC++A P+EYAE+LD LRS+Y  KQ
Subjt:  ILIDIVKCVATFFTEEPALAISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFTKQ

AT1G56440.2 Tetratricopeptide repeat (TPR)-like superfamily protein4.4e-10848.08Show/hide
Query:  MADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKKLKPQATGKEKEGRGQAEKASAA--DYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKK
        MA S  KHGRDQ  DFQGF NDLQDWELS K KDKK+K Q              + +   D+ K Y ++  LS +   E S +D++SEKEQGNE+FKQKK
Subjt:  MADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDKKLKPQATGKEKEGRGQAEKASAA--DYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKK

Query:  FKEAIDCYSRSIALSPTA-----------------EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVG
        F EAIDCYSRSIALSP A                 EAE DCTEALNLDDRYIKAYSRRATARKELG  KEA EDAEFA RLEP +QE+KKQ+A++++ + 
Subjt:  FKEAIDCYSRSIALSPTA-----------------EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVG

Query:  KAILEKASGASRSFTKD---KGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVKENGGENAVKS-----------------SARLEENDDRSTG--
        K I+EKA+GA +S  ++      + K   K K++      +   +T     Q      E+ G+  +++                 S  L+E     +   
Subjt:  KAILEKASGASRSFTKD---KGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVKENGGENAVKS-----------------SARLEENDDRSTG--

Query:  ---AEISFKSVATNGFH--------KDSSSYLGALERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARLLKAIS
            EI      T G           D +    +   ++V ++ ELKPSVQELA+ AAS +M EA+KNI  P +AY+FE SWR FSGD AL+++LLK  +
Subjt:  ---AEISFKSVATNGFH--------KDSSSYLGALERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARLLKAIS

Query:  PDKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFTKQ
        P  LPQIFKNALT+P+L+DI+KCVA+FFTE+  LA+  +ENL KVPRF++L+MCL S+EK +LLKIW++VFC++A P+EYAE+LD LRS+Y  KQ
Subjt:  PDKLPQIFKNALTAPILIDIVKCVATFFTEEPALAISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFTKQ

AT2G42810.1 protein phosphatase 5.25.2e-0832.33Show/hide
Query:  QTEQSFVDAASE-KEQGNEYFKQKKFKEAIDCYSRSIALSPT------------------AEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALED
        + E S V  A E K Q NE FK  K+  AID Y+++I L+                      A  D ++A+ +D RY K Y RR  A   +GK K+AL+D
Subjt:  QTEQSFVDAASE-KEQGNEYFKQKKFKEAIDCYSRSIALSPT------------------AEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALED

Query:  AEFAQRLEPHNQEIKKQHAELRAFVGKAILEKA
         +  +RL P++ +  ++  E    V K   E+A
Subjt:  AEFAQRLEPHNQEIKKQHAELRAFVGKAILEKA

AT3G17970.1 translocon at the outer membrane of chloroplasts 64-III2.7e-1239.64Show/hide
Query:  KEQGNEYFKQKKFKEAIDCYSRSIALSPT------------------AEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQE
        KE+GN+ FK+K +++AI  YS +I LS                     +AE+DCT+A+ LD + +KAY RR TAR+ LG  K A+ED  +A  LEP+N+ 
Subjt:  KEQGNEYFKQKKFKEAIDCYSRSIALSPT------------------AEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQE

Query:  IKKQHAELRAF
               LR F
Subjt:  IKKQHAELRAF

AT5G09420.1 translocon at the outer membrane of chloroplasts 64-V1.8e-0833.93Show/hide
Query:  KEQGNEYFKQKKFKEAIDCYSRSIALSPT------------------AEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQE
        KE+GN  +K K++ +A++ Y+ +I L+                     +AE DCT+A+ +D + +KAY RR TAR+ L + KEA  D   A  LEP N+ 
Subjt:  KEQGNEYFKQKKFKEAIDCYSRSIALSPT------------------AEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQE

Query:  IKKQHAELRAFV
         K     LR  +
Subjt:  IKKQHAELRAFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGAGTACATCCAAACTTCGTGGGCTATGTTATTTTTTTCGCTTTGGCCCAATCAGCTGGGATTTTACAGATTTTGAATCCACGGCGAAAACTCCGACCGGCGAA
CGGCTCCGACTCCGTGGAATTGCTGGACGCTTCGAGAAGCTCTTTCGAAGACCAGCTGCTACAATTTTCCATATTCTCTTTCTTCGTCTGGATTCTTCTTTTCTTCTGCT
CTCCCATGGCCGATTCCTCCGGCAAGCACGGGCGCGATCAGCCTCTGGATTTCCAGGGATTTTTGAATGACTTGCAGGATTGGGAACTCTCCTTCAAGGGAAAAGACAAG
AAACTGAAGCCACAGGCCACTGGTAAAGAAAAGGAGGGTAGAGGGCAGGCAGAAAAAGCTTCAGCAGCTGACTACTTGAAGCACTACGATGCAGTTAACCGCCTATCAAG
AAATTTTCAGACTGAACAGAGTTTTGTTGATGCCGCTTCAGAGAAAGAACAGGGTAACGAGTATTTTAAGCAAAAGAAGTTCAAAGAAGCCATTGACTGCTATTCAAGAA
GTATTGCTCTGTCACCAACAGCGGAGGCTGAGGATGACTGTACAGAGGCCTTAAATTTAGATGATCGATATATTAAAGCATACTCACGCCGAGCAACAGCTAGGAAGGAA
CTCGGGAAGGCTAAAGAAGCCTTGGAGGATGCTGAATTTGCCCAGAGATTGGAGCCTCACAACCAAGAGATCAAAAAGCAACATGCTGAGCTCAGAGCTTTTGTTGGGAA
AGCAATTCTTGAGAAGGCATCTGGTGCTTCGAGAAGCTTCACAAAAGATAAGGGGACAGTTCGAAAATCTGACTCTAAAGCAAAAAGTCAGGACATCCCTCCTGCCCCTA
GCAGCACACCAAGGACAGAGTTATCGGCAGCTCAAGAACGCAGTGAAGTAAAGGAAAATGGTGGGGAAAATGCTGTCAAGTCATCAGCACGTTTAGAAGAAAATGATGAC
AGAAGCACAGGAGCTGAAATCTCATTCAAAAGTGTAGCAACAAATGGTTTTCACAAAGACTCAAGTTCATATTTGGGGGCATTGGAGAGAGATCGTGTTCCAAGAAAGCA
GGAACTGAAACCCTCAGTGCAGGAACTTGCTTCTCGAGCAGCTTCTAGAAGCATGGTTGAAGCTGCAAAAAATATTATAGCCCCAACTACTGCCTATCAATTTGAAGTTT
CTTGGCGAGGATTTTCTGGTGATTGTGCACTGCAGGCTCGTCTTTTGAAGGCCATCTCTCCAGACAAGTTGCCTCAGATATTCAAAAATGCACTAACAGCTCCAATTTTA
ATAGACATTGTCAAGTGTGTGGCTACGTTCTTCACTGAAGAGCCGGCTTTGGCTATCAGTATTTTAGAAAATTTAGCCAAGGTCCCGAGATTCAGCATACTCATGATGTG
TCTTCCATCCTCTGAAAAGTTTGATCTCCTCAAGATTTGGGATGAAGTATTTTGTGATGAGGCTGTTCCAATTGAGTACGCAGAAATGCTCGACAGCTTGCGTTCAAAGT
ACTTTACTAAACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGAGTACATCCAAACTTCGTGGGCTATGTTATTTTTTTCGCTTTGGCCCAATCAGCTGGGATTTTACAGATTTTGAATCCACGGCGAAAACTCCGACCGGCGAA
CGGCTCCGACTCCGTGGAATTGCTGGACGCTTCGAGAAGCTCTTTCGAAGACCAGCTGCTACAATTTTCCATATTCTCTTTCTTCGTCTGGATTCTTCTTTTCTTCTGCT
CTCCCATGGCCGATTCCTCCGGCAAGCACGGGCGCGATCAGCCTCTGGATTTCCAGGGATTTTTGAATGACTTGCAGGATTGGGAACTCTCCTTCAAGGGAAAAGACAAG
AAACTGAAGCCACAGGCCACTGGTAAAGAAAAGGAGGGTAGAGGGCAGGCAGAAAAAGCTTCAGCAGCTGACTACTTGAAGCACTACGATGCAGTTAACCGCCTATCAAG
AAATTTTCAGACTGAACAGAGTTTTGTTGATGCCGCTTCAGAGAAAGAACAGGGTAACGAGTATTTTAAGCAAAAGAAGTTCAAAGAAGCCATTGACTGCTATTCAAGAA
GTATTGCTCTGTCACCAACAGCGGAGGCTGAGGATGACTGTACAGAGGCCTTAAATTTAGATGATCGATATATTAAAGCATACTCACGCCGAGCAACAGCTAGGAAGGAA
CTCGGGAAGGCTAAAGAAGCCTTGGAGGATGCTGAATTTGCCCAGAGATTGGAGCCTCACAACCAAGAGATCAAAAAGCAACATGCTGAGCTCAGAGCTTTTGTTGGGAA
AGCAATTCTTGAGAAGGCATCTGGTGCTTCGAGAAGCTTCACAAAAGATAAGGGGACAGTTCGAAAATCTGACTCTAAAGCAAAAAGTCAGGACATCCCTCCTGCCCCTA
GCAGCACACCAAGGACAGAGTTATCGGCAGCTCAAGAACGCAGTGAAGTAAAGGAAAATGGTGGGGAAAATGCTGTCAAGTCATCAGCACGTTTAGAAGAAAATGATGAC
AGAAGCACAGGAGCTGAAATCTCATTCAAAAGTGTAGCAACAAATGGTTTTCACAAAGACTCAAGTTCATATTTGGGGGCATTGGAGAGAGATCGTGTTCCAAGAAAGCA
GGAACTGAAACCCTCAGTGCAGGAACTTGCTTCTCGAGCAGCTTCTAGAAGCATGGTTGAAGCTGCAAAAAATATTATAGCCCCAACTACTGCCTATCAATTTGAAGTTT
CTTGGCGAGGATTTTCTGGTGATTGTGCACTGCAGGCTCGTCTTTTGAAGGCCATCTCTCCAGACAAGTTGCCTCAGATATTCAAAAATGCACTAACAGCTCCAATTTTA
ATAGACATTGTCAAGTGTGTGGCTACGTTCTTCACTGAAGAGCCGGCTTTGGCTATCAGTATTTTAGAAAATTTAGCCAAGGTCCCGAGATTCAGCATACTCATGATGTG
TCTTCCATCCTCTGAAAAGTTTGATCTCCTCAAGATTTGGGATGAAGTATTTTGTGATGAGGCTGTTCCAATTGAGTACGCAGAAATGCTCGACAGCTTGCGTTCAAAGT
ACTTTACTAAACAATGACAGACGTTTCTTTAATGAGAAGAAGCACTTTTATCTTCAAACTCTGCCTCTCTTTAAGCCAACCCAGCTGCTTATCTTCAGTGTAAAGTATCC
AATTATTCTGTTTTTGGGATCATTATTTGGCATTTTGACATATCTAACTCACGCAATGAAGTTAAATGTTATAAAAAGTGTCTTCTTTTCTATAACCTCTCCCACATGCT
AGAATATTATCAGAATTTGCTCGGTAGAAGTCTCGGACTCGAATTCTTGAGGACATTTCCAAAATTGACTGAACATAAAAGTTTTCATCACAAGAAGAATAAGGTAACTG
GTTTCTACCATTAGTATACGACCTTACTTGATTTGTTCTATAGGTTGTACAACTCCGTTCTTAGAGTTCTAAGATTAGTATATAGACCACTAGATAGTAGGGTCAGTTGC
CCTATGATGTGTGTTGTTATAGTGCACTGCCACATGCAGGTGGACAATTGAATGGTCCTTTCTACACTACTGGACCATCCAAAACTCAAGTCTTTATGTGAATGGGTAGG
ATTTGCAATTTTCATTAGTACTTAAGATATGCTGTTGCATCATAATCTATTTGGGGTCCAGAGTTTAAAATGGACTTGGACAAATCATATGCTCCATTTTGCAATCTTTT
GAGTTATAGGTGTCTACATT
Protein sequenceShow/hide protein sequence
MLRVHPNFVGYVIFFALAQSAGILQILNPRRKLRPANGSDSVELLDASRSSFEDQLLQFSIFSFFVWILLFFCSPMADSSGKHGRDQPLDFQGFLNDLQDWELSFKGKDK
KLKPQATGKEKEGRGQAEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAEAEDDCTEALNLDDRYIKAYSRRATARKE
LGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKAILEKASGASRSFTKDKGTVRKSDSKAKSQDIPPAPSSTPRTELSAAQERSEVKENGGENAVKSSARLEENDD
RSTGAEISFKSVATNGFHKDSSSYLGALERDRVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDCALQARLLKAISPDKLPQIFKNALTAPIL
IDIVKCVATFFTEEPALAISILENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFTKQ