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Lsi11G006460 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G006460
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr11:6810494..6810841
RNA-Seq ExpressionLsi11G006460
SyntenyLsi11G006460
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048079.1 hypothetical protein E6C27_scaffold385G001510 [Cucumis melo var. makuwa]9.8e-2684.88Show/hide
Query:  METKATDSKAVVTDQTSSSTIGMLRRPRGQRRNQA-ELQFHEKSEERTSVHRNMEDLRENSNSIQRNADLGDLPAIVALSPSCNSG
        METKATDSKAVVTDQ +SST+ MLRRPR QRRNQA ELQFHEKSEER SVHRNMEDL+ENSNS+QRNADLGD+PAI ALS S NSG
Subjt:  METKATDSKAVVTDQTSSSTIGMLRRPRGQRRNQA-ELQFHEKSEERTSVHRNMEDLRENSNSIQRNADLGDLPAIVALSPSCNSG
TrEMBL top hitse value%identityAlignment
A0A0A0LGJ2 Uncharacterized protein1.3e-0772.22Show/hide
Query:  METKATDSKAVVTDQTSSSTIGMLRRPRGQRRNQA-ELQFHEKSEERTSVHRNM
        METKATDSKAVVTDQ +SS +  LRRPR QRRNQA E+QFHEKSEER+ + R +
Subjt:  METKATDSKAVVTDQTSSSTIGMLRRPRGQRRNQA-ELQFHEKSEERTSVHRNM
A0A5A7U3P7 Uncharacterized protein4.7e-2684.88Show/hide
Query:  METKATDSKAVVTDQTSSSTIGMLRRPRGQRRNQA-ELQFHEKSEERTSVHRNMEDLRENSNSIQRNADLGDLPAIVALSPSCNSG
        METKATDSKAVVTDQ +SST+ MLRRPR QRRNQA ELQFHEKSEER SVHRNMEDL+ENSNS+QRNADLGD+PAI ALS S NSG
Subjt:  METKATDSKAVVTDQTSSSTIGMLRRPRGQRRNQA-ELQFHEKSEERTSVHRNMEDLRENSNSIQRNADLGDLPAIVALSPSCNSG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACTAAAGCGACGGATTCGAAGGCGGTGGTGACGGACCAGACGAGTTCGTCGACGATCGGAATGTTGAGAAGGCCGCGAGGCCAGCGGCGGAACCAGGCGGAGCT
CCAGTTCCATGAGAAAAGCGAGGAGAGGACGTCGGTCCACCGGAATATGGAGGATCTGAGGGAAAATTCGAATTCCATCCAACGGAATGCCGATCTCGGTGACCTGCCCG
CCATTGTTGCTCTTTCGCCTTCCTGTAACTCTGGCGAGATTATAGAGAGAGAGACTATGTGGGCGGGGGACCGGGCTTATAAAACTTGGATACAGTGGGAATTATTAGGT
GTGGCCGCGTATAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGACTAAAGCGACGGATTCGAAGGCGGTGGTGACGGACCAGACGAGTTCGTCGACGATCGGAATGTTGAGAAGGCCGCGAGGCCAGCGGCGGAACCAGGCGGAGCT
CCAGTTCCATGAGAAAAGCGAGGAGAGGACGTCGGTCCACCGGAATATGGAGGATCTGAGGGAAAATTCGAATTCCATCCAACGGAATGCCGATCTCGGTGACCTGCCCG
CCATTGTTGCTCTTTCGCCTTCCTGTAACTCTGGCGAGATTATAGAGAGAGAGACTATGTGGGCGGGGGACCGGGCTTATAAAACTTGGATACAGTGGGAATTATTAGGT
GTGGCCGCGTATAGATAG
Protein sequenceShow/hide protein sequence
METKATDSKAVVTDQTSSSTIGMLRRPRGQRRNQAELQFHEKSEERTSVHRNMEDLRENSNSIQRNADLGDLPAIVALSPSCNSGEIIERETMWAGDRAYKTWIQWELLG
VAAYR