; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G006490 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G006490
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of unknown function, DUF538
Genome locationchr11:6843080..6843598
RNA-Seq ExpressionLsi11G006490
SyntenyLsi11G006490
Gene Ontology termsNA
InterPro domainsIPR007493 - Protein of unknown function DUF538
IPR036758 - At5g01610-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048082.1 plant/F25P12-18 protein [Cucumis melo var. makuwa]2.5e-7885.16Show/hide
Query:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK
        MSL+TEEIKAKADELYYGDEMCQ KS+ELLKEMDLPNGLLPMKDMEECG+VKETGFVWLKQKKSYTHKF+ IDRLVTYGTEVTAYV+KNK+KKLTGVKAK
Subjt:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK

Query:  ELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKE----------VVNAAAAAAAIEVKEV
        EL++WLPLCDIYVN+PPNGKITFKSTTGLSRTFPVSAF+VEE VK V EK+NKEKE          VVN AAAAAAIEVKEV
Subjt:  ELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKE----------VVNAAAAAAAIEVKEV

TYJ96455.1 plant/F25P12-18 protein [Cucumis melo var. makuwa]9.7e-7882.89Show/hide
Query:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK
        MSL+TEEIKAKADELYYGDEMCQ KS+ELLKEMDLPNGLLPMKDMEECG+VKETGFVWLKQKKSYTHKF+ IDRLVTYGTEVTAYV+KNK+KKLTGVKAK
Subjt:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK

Query:  ELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKE---------------VVNAAAAAAAIEVKEV
        EL++WLPLCDIYVN+PPNGKITFKSTTGLSRTFPVSAF+VEE VK V EK+NKEKE               VVN AAAAAAIEVKEV
Subjt:  ELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKE---------------VVNAAAAAAAIEVKEV

XP_008453262.1 PREDICTED: uncharacterized protein LOC103494033 [Cucumis melo]6.7e-7987.57Show/hide
Query:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK
        MSL+TEEIKAKADELYYGDEMCQ KS+ELLKEMDLPNGLLPMKDMEECG+VKETGFVWLKQKKSYTHKF+ IDRLVTYGTEVTAYV+KNK+KKLTGVKAK
Subjt:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK

Query:  ELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKE-----VVNAAAAAAAIEVKEV
        EL++WLPLCDIYVN+PPNGKITFKSTTGLSRTFPVSAF+VEE VK V EK+NKEKE     VVN AAAAAAIEVKEV
Subjt:  ELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKE-----VVNAAAAAAAIEVKEV

XP_011648877.1 uncharacterized protein LOC105434559 [Cucumis sativus]5.7e-7882.35Show/hide
Query:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK
        MSL+TE+IKAKADELYYGDEMCQ KS+ELLKEMDLPNGLLPMKDMEECG+VKETGFVWLKQKKSYTHKF+ IDRLVTYGTEVTAYV+KNK+KKLTGVKAK
Subjt:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK

Query:  ELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEEKVKDVE---------------EKDNKEKEVVNAAAAAAAIEVKEV
        EL++WLPLCDIYVN+PPNGKITFKSTTGLSRTFPVSAF+VEE+VK VE               EK+NKEKEVVN A AAAAIEVKEV
Subjt:  ELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEEKVKDVE---------------EKDNKEKEVVNAAAAAAAIEVKEV

XP_038889922.1 uncharacterized protein LOC120079689 [Benincasa hispida]2.5e-8192.44Show/hide
Query:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK
        MSL+TEEIKAKADELYYGDEMC+ KS+ELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFE IDRLVTYGTEVTAYV+KNK+KKLTGVKAK
Subjt:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK

Query:  ELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKEVVNAAAAAAAIEVKEV
        ELL+WLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAF+VEEKVKD EEKDNKEKEVV   AAAAAIEVKEV
Subjt:  ELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKEVVNAAAAAAAIEVKEV

TrEMBL top hitse value%identityAlignment
A0A0A0LH04 Uncharacterized protein2.7e-7882.35Show/hide
Query:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK
        MSL+TE+IKAKADELYYGDEMCQ KS+ELLKEMDLPNGLLPMKDMEECG+VKETGFVWLKQKKSYTHKF+ IDRLVTYGTEVTAYV+KNK+KKLTGVKAK
Subjt:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK

Query:  ELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEEKVKDVE---------------EKDNKEKEVVNAAAAAAAIEVKEV
        EL++WLPLCDIYVN+PPNGKITFKSTTGLSRTFPVSAF+VEE+VK VE               EK+NKEKEVVN A AAAAIEVKEV
Subjt:  ELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEEKVKDVE---------------EKDNKEKEVVNAAAAAAAIEVKEV

A0A1S3BV88 uncharacterized protein LOC1034940333.2e-7987.57Show/hide
Query:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK
        MSL+TEEIKAKADELYYGDEMCQ KS+ELLKEMDLPNGLLPMKDMEECG+VKETGFVWLKQKKSYTHKF+ IDRLVTYGTEVTAYV+KNK+KKLTGVKAK
Subjt:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK

Query:  ELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKE-----VVNAAAAAAAIEVKEV
        EL++WLPLCDIYVN+PPNGKITFKSTTGLSRTFPVSAF+VEE VK V EK+NKEKE     VVN AAAAAAIEVKEV
Subjt:  ELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKE-----VVNAAAAAAAIEVKEV

A0A5A7TX45 Plant/F25P12-18 protein1.2e-7885.16Show/hide
Query:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK
        MSL+TEEIKAKADELYYGDEMCQ KS+ELLKEMDLPNGLLPMKDMEECG+VKETGFVWLKQKKSYTHKF+ IDRLVTYGTEVTAYV+KNK+KKLTGVKAK
Subjt:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK

Query:  ELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKE----------VVNAAAAAAAIEVKEV
        EL++WLPLCDIYVN+PPNGKITFKSTTGLSRTFPVSAF+VEE VK V EK+NKEKE          VVN AAAAAAIEVKEV
Subjt:  ELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKE----------VVNAAAAAAAIEVKEV

A0A5D3BDB9 Plant/F25P12-18 protein4.7e-7882.89Show/hide
Query:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK
        MSL+TEEIKAKADELYYGDEMCQ KS+ELLKEMDLPNGLLPMKDMEECG+VKETGFVWLKQKKSYTHKF+ IDRLVTYGTEVTAYV+KNK+KKLTGVKAK
Subjt:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK

Query:  ELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKE---------------VVNAAAAAAAIEVKEV
        EL++WLPLCDIYVN+PPNGKITFKSTTGLSRTFPVSAF+VEE VK V EK+NKEKE               VVN AAAAAAIEVKEV
Subjt:  ELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKE---------------VVNAAAAAAAIEVKEV

A0A6J1KJA4 uncharacterized protein LOC1114937221.4e-6981.5Show/hide
Query:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK
        MSLVTE IKAKADE+Y+GDE+CQ K++ELLKEMDLPNGLLPMKDMEECG++KETGFVWLKQKKSYTHKF+ I RLVTYG EVTAYVQKNK+KKLTGVKAK
Subjt:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK

Query:  ELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEEK-VKDVEEKDNKEKEVVNAAAAAAAIEVKEV
        ELL+WL L DI V++PP GKITFK+TTGL RTFPVSAFEVEE  VKDVE K+NKEKEVV + AAAAAIEVK++
Subjt:  ELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEEK-VKDVEEKDNKEKEVVNAAAAAAAIEVKEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G09310.1 Protein of unknown function, DUF5381.0e-4858.66Show/hide
Query:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK
        M LVTEE++AKA E+Y GDE+C+EK+K  LKE+ +PNGLLP+KD+EE G  +E+G VWLKQKKS THKF +ID+LV+YGTEVTA V+  KIKKLTGVKAK
Subjt:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK

Query:  ELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEE--------KVKDVEEKDNKEKEVVNAAAAAAAIEVKE
        ELL+W+ + +IY  EPP  KITFK+ T LSRTFPV+AF V E        K +  +EK ++  E   A A   A+ VKE
Subjt:  ELLVWLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEE--------KVKDVEEKDNKEKEVVNAAAAAAAIEVKE

AT1G56580.1 Protein of unknown function, DUF5381.9e-4759.88Show/hide
Query:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK
        M LVT+E++A+A E Y GDE+C+EK+KE LKE+ +PNGLLP+KD+EE G  +ETG VWLKQKKS THKFE I +LV+Y TEV A V+  KIKKLTGVKAK
Subjt:  MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAK

Query:  ELLVWLPLCDIYVNEP-PNGKITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKEVVNAAAAAAA
        ELL+W+ L ++ + +P  +GKI F++ TGLSRTFPVSAF V E  K   EK+N   EV  A A   A
Subjt:  ELLVWLPLCDIYVNEP-PNGKITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKEVVNAAAAAAA

AT4G24130.1 Protein of unknown function, DUF5382.9e-3245.86Show/hide
Query:  ELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAKELLVWLPLCDIYV
        E+ YG E C ++S ELL+E+  P G++P+K++ ECG V+ TG+VW+KQ   Y H FE  +  V+YG EVTAYV K  +KK+TGVK+K++ +W+P+ ++ +
Subjt:  ELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAKELLVWLPLCDIYV

Query:  NEPPNGKITFKSTTGLSRTFPVSAFEVEEKVKD
         EP + KI FK+  G+ R+FPV+ F  EE+ ++
Subjt:  NEPPNGKITFKSTTGLSRTFPVSAFEVEEKVKD

AT5G46230.1 Protein of unknown function, DUF5381.1e-3144.93Show/hide
Query:  TEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAKELLV
        T+  + +  E+  G+  C++K+KE+L  M+LP GLLP+ +M E G  K TG+VW+K K    H+F+ I R V+Y +EVTA ++  ++ +LTG+K+KE+L+
Subjt:  TEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAKELLV

Query:  WLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEE
        W+ + +I+VN     +ITF + TGLSRTFPV+AFE +E
Subjt:  WLPLCDIYVNEPPNGKITFKSTTGLSRTFPVSAFEVEE

AT5G49600.1 Protein of unknown function, DUF5385.5e-3149.38Show/hide
Query:  LVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLK--------QKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKL
        +VTE +KAKA E+Y+GD+ C+EK   LL E+ LPN LL  K+++ECG VK+TGFVWLK        QK+ Y       + +V +  EVTAY + N+IKKL
Subjt:  LVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLK--------QKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKL

Query:  TGVKAKELLVWLPLCDIYVNEPPNGKITFKSTTG-LSRTFPVSAFE-VEEKVKDVEEKDNKE
        TGVKAKE +VW+ L +I VN   +G ITFK+  G LS++ P+S FE V     D++EK  KE
Subjt:  TGVKAKELLVWLPLCDIYVNEPPNGKITFKSTTG-LSRTFPVSAFE-VEEKVKDVEEKDNKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTAGTCACAGAAGAGATCAAAGCCAAAGCTGATGAGCTTTACTATGGAGATGAGATGTGCCAAGAGAAATCAAAGGAGCTGCTCAAAGAAATGGACCTTCCAAA
TGGGCTGTTGCCAATGAAAGACATGGAGGAATGTGGGATGGTGAAAGAGACAGGGTTTGTTTGGCTGAAGCAGAAAAAGAGCTACACTCATAAGTTTGAACAGATTGATA
GGCTGGTTACTTATGGCACTGAAGTTACAGCCTATGTGCAGAAGAACAAGATTAAGAAGCTTACTGGAGTCAAGGCCAAGGAGCTCTTGGTTTGGCTCCCACTCTGTGAT
ATCTATGTTAATGAACCACCGAACGGAAAAATCACGTTCAAGTCTACGACTGGGCTGTCGAGAACTTTTCCCGTGTCAGCTTTTGAGGTTGAAGAAAAAGTCAAGGATGT
TGAAGAGAAGGACAACAAAGAGAAGGAAGTAGTGAATGCAGCAGCTGCAGCTGCAGCTATAGAGGTGAAGGAGGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTAGTCACAGAAGAGATCAAAGCCAAAGCTGATGAGCTTTACTATGGAGATGAGATGTGCCAAGAGAAATCAAAGGAGCTGCTCAAAGAAATGGACCTTCCAAA
TGGGCTGTTGCCAATGAAAGACATGGAGGAATGTGGGATGGTGAAAGAGACAGGGTTTGTTTGGCTGAAGCAGAAAAAGAGCTACACTCATAAGTTTGAACAGATTGATA
GGCTGGTTACTTATGGCACTGAAGTTACAGCCTATGTGCAGAAGAACAAGATTAAGAAGCTTACTGGAGTCAAGGCCAAGGAGCTCTTGGTTTGGCTCCCACTCTGTGAT
ATCTATGTTAATGAACCACCGAACGGAAAAATCACGTTCAAGTCTACGACTGGGCTGTCGAGAACTTTTCCCGTGTCAGCTTTTGAGGTTGAAGAAAAAGTCAAGGATGT
TGAAGAGAAGGACAACAAAGAGAAGGAAGTAGTGAATGCAGCAGCTGCAGCTGCAGCTATAGAGGTGAAGGAGGTCTGA
Protein sequenceShow/hide protein sequence
MSLVTEEIKAKADELYYGDEMCQEKSKELLKEMDLPNGLLPMKDMEECGMVKETGFVWLKQKKSYTHKFEQIDRLVTYGTEVTAYVQKNKIKKLTGVKAKELLVWLPLCD
IYVNEPPNGKITFKSTTGLSRTFPVSAFEVEEKVKDVEEKDNKEKEVVNAAAAAAAIEVKEV