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Lsi11G006560 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G006560
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein NIM1-INTERACTING 1-like
Genome locationchr11:6895434..6895820
RNA-Seq ExpressionLsi11G006560
SyntenyLsi11G006560
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR031425 - NPR1/NH1-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599168.1 hypothetical protein SDJN03_08946, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3165.71Show/hide
Query:  MEGGRKRRKLQNNEK--EEEEEEDNDDEDEEEKIKLFFALIQNTKAMRDRMKSKESAEEEK-SKGVWNPKFQPEDFIEDG--NYNNKSNITIQLPAASSS
        MEGGRKRRKLQN E+  ++EEE++++DEDEEEK+KLFFALIQNTKAMRD++KSKESAEE+  +KGVWNPKFQPEDFIEDG   + +KS   I+L AASSS
Subjt:  MEGGRKRRKLQNNEK--EEEEEEDNDDEDEEEKIKLFFALIQNTKAMRDRMKSKESAEEEK-SKGVWNPKFQPEDFIEDG--NYNNKSNITIQLPAASSS

Query:  TTKQSNEKRE-------QEEQEDKDKVGKGKNGLDLNLSL
         TKQSN+K E       QE QE ++++ + K GLDLNLSL
Subjt:  TTKQSNEKRE-------QEEQEDKDKVGKGKNGLDLNLSL

KGN61024.1 hypothetical protein Csa_021295 [Cucumis sativus]2.6e-2771.21Show/hide
Query:  MEGGRKRRKLQNNEKEEEEEEDNDDEDEEEKIKLFFALIQNTKAMRDRMK-SKESAEEEKSKGVWNPKFQPEDF-IEDG-NYNNKSN-ITIQLPAASSST
        ME GRKRRKLQ    EEEEEE      E+EK++LF+ALIQNTKAMRD MK SKE  EEEKSKGVWNPKFQPEDF  EDG NYNNKSN I +QL AASSST
Subjt:  MEGGRKRRKLQNNEKEEEEEEDNDDEDEEEKIKLFFALIQNTKAMRDRMK-SKESAEEEKSKGVWNPKFQPEDF-IEDG-NYNNKSN-ITIQLPAASSST

Query:  TKQSNEKREQEEQEDKDKVGKGKNGLDLNLSL
        TKQ NEK++QEE +   KV + K GLDLNLSL
Subjt:  TKQSNEKREQEEQEDKDKVGKGKNGLDLNLSL

XP_038889660.1 protein NIM1-INTERACTING 3 isoform X1 [Benincasa hispida]1.1e-3378.45Show/hide
Query:  MEGGRKRRKLQNNEKEEEEEEDNDDEDEEEKIKLFFALIQNTKAMRDRMKSKESAEEEKSKGVWNPKFQPEDFIEDGNYNNKSNITIQLPAASSSTTKQS
        ME GRKRRKL     EEEEEED+D+E E   +KL FALIQN KAMR RMKSKES EEEKSKGVWNPKFQPEDFIEDG YNNKSNIT+QLPAASSSTTK S
Subjt:  MEGGRKRRKLQNNEKEEEEEEDNDDEDEEEKIKLFFALIQNTKAMRDRMKSKESAEEEKSKGVWNPKFQPEDFIEDGNYNNKSNITIQLPAASSSTTKQS

Query:  NEKREQEEQEDKDKVG
        N K+EQ+EQ+DK KVG
Subjt:  NEKREQEEQEDKDKVG

XP_038889661.1 protein NIM1-INTERACTING 3 isoform X2 [Benincasa hispida]2.1e-3278.07Show/hide
Query:  MEGGRKRRKLQNNEKEEEEEEDNDDEDEEEKIKLFFALIQNTKAMRDRMKSKESAEEEKSKGVWNPKFQPEDFIEDGNYNNKSNITIQLPAASSSTTKQS
        ME GRKRRKL     EEEEEED+D+E E   +KL FALIQN KAMR RMKSKES EEEKSKGVWNPKFQPEDFIEDG YNNKSNIT+QLPAASSSTTK S
Subjt:  MEGGRKRRKLQNNEKEEEEEEDNDDEDEEEKIKLFFALIQNTKAMRDRMKSKESAEEEKSKGVWNPKFQPEDFIEDGNYNNKSNITIQLPAASSSTTKQS

Query:  NEKREQEEQEDKDK
        N K+EQ+EQ+DK K
Subjt:  NEKREQEEQEDKDK

XP_038889662.1 protein NIM1-INTERACTING 3 isoform X3 [Benincasa hispida]2.1e-3278.07Show/hide
Query:  MEGGRKRRKLQNNEKEEEEEEDNDDEDEEEKIKLFFALIQNTKAMRDRMKSKESAEEEKSKGVWNPKFQPEDFIEDGNYNNKSNITIQLPAASSSTTKQS
        ME GRKRRKL     EEEEEED+D+E E   +KL FALIQN KAMR RMKSKES EEEKSKGVWNPKFQPEDFIEDG YNNKSNIT+QLPAASSSTTK S
Subjt:  MEGGRKRRKLQNNEKEEEEEEDNDDEDEEEKIKLFFALIQNTKAMRDRMKSKESAEEEKSKGVWNPKFQPEDFIEDGNYNNKSNITIQLPAASSSTTKQS

Query:  NEKREQEEQEDKDK
        N K+EQ+EQ+DK K
Subjt:  NEKREQEEQEDKDK

TrEMBL top hitse value%identityAlignment
A0A061F4Z3 Uncharacterized protein7.9e-1446.1Show/hide
Query:  MEGGRKRRKLQNNEKE---EEEEEDNDDEDEEEKIKLFFALIQNTKAMRDRMK-----SKESAEEEKSK-----GVWNPKFQPEDFIEDGNYNNKSNITI
        ME GRK+RK+ N E+E   EEEEE++D+E+EEEK++ FFALI++T+ MRDR++     SKE  E +K +      VWNPKFQPEDF+ED    N   +  
Subjt:  MEGGRKRRKLQNNEKE---EEEEEDNDDEDEEEKIKLFFALIQNTKAMRDRMK-----SKESAEEEKSK-----GVWNPKFQPEDFIEDGNYNNKSNITI

Query:  QLPAASSSTTKQSNEKREQEEQEDKDKVGKGKNGLDLNLSL
          P+++          REQE+ +D  K G    GLDL LSL
Subjt:  QLPAASSSTTKQSNEKREQEEQEDKDKVGKGKNGLDLNLSL

A0A0A0LJ23 Uncharacterized protein1.3e-2771.21Show/hide
Query:  MEGGRKRRKLQNNEKEEEEEEDNDDEDEEEKIKLFFALIQNTKAMRDRMK-SKESAEEEKSKGVWNPKFQPEDF-IEDG-NYNNKSN-ITIQLPAASSST
        ME GRKRRKLQ    EEEEEE      E+EK++LF+ALIQNTKAMRD MK SKE  EEEKSKGVWNPKFQPEDF  EDG NYNNKSN I +QL AASSST
Subjt:  MEGGRKRRKLQNNEKEEEEEEDNDDEDEEEKIKLFFALIQNTKAMRDRMK-SKESAEEEKSKGVWNPKFQPEDF-IEDG-NYNNKSN-ITIQLPAASSST

Query:  TKQSNEKREQEEQEDKDKVGKGKNGLDLNLSL
        TKQ NEK++QEE +   KV + K GLDLNLSL
Subjt:  TKQSNEKREQEEQEDKDKVGKGKNGLDLNLSL

A0A1U8I688 bromodomain-containing protein 2-like2.8e-1141.5Show/hide
Query:  MEGGRKRRKLQNNEKEEEEEEDNDDEDEEEKIKLFFALIQNTKAMRDRMKS-------KESAEEEKSK------------GVWNPKFQPEDFIEDGNYNN
        ME  RK+RK+ N E++++E+ED DD DEEEK++ FFALI++T+ MRDR+++       KE   ++K +            G WNPKFQ EDF+E G+ + 
Subjt:  MEGGRKRRKLQNNEKEEEEEEDNDDEDEEEKIKLFFALIQNTKAMRDRMKS-------KESAEEEKSK------------GVWNPKFQPEDFIEDGNYNN

Query:  KSNITIQLPAASSSTTKQSNEKREQEEQEDKDKVGKGKNGLDLNLSL
          N ++ L  A  S++K    +RE E+  + D  G+G  GLDL LSL
Subjt:  KSNITIQLPAASSSTTKQSNEKREQEEQEDKDKVGKGKNGLDLNLSL

A0A6J1DQG7 LOW QUALITY PROTEIN: uncharacterized protein LOC1110232845.5e-2362.02Show/hide
Query:  MEGGRKRRKLQNNEKEEEEEEDNDDEDEEEKIKLFFALIQNTKAMRDRMKSKESA-EEEKSKGVWNPKFQPEDFIEDGNYNNKSNITIQLPAASSSTTKQ
        ME  R++RKLQ++EKE ++E    DE+EEEK+KLFFALIQNTK++RDR+KSK+SA +++KSKGVWNPKFQPEDFIED   + KSN T Q   A+SS+TKQ
Subjt:  MEGGRKRRKLQNNEKEEEEEEDNDDEDEEEKIKLFFALIQNTKAMRDRMKSKESA-EEEKSKGVWNPKFQPEDFIEDGNYNNKSNITIQLPAASSSTTKQ

Query:  SNEKREQEEQEDKDKVGKGKNGLDLNLSL
         N  +++EE++ KDKV +G   LDLNLSL
Subjt:  SNEKREQEEQEDKDKVGKGKNGLDLNLSL

A0A6P9EP42 protein NIM1-INTERACTING 1-like1.6e-1142.66Show/hide
Query:  MEGGRKRRKLQNNEKEEEEEEDNDDEDEEEKIKLFFALIQNTKAMRDRMKSKESAEEEKS------------KG--VWNPKFQPEDFIEDGNYNNKSNI-
        MEG RK+RK+      E EE ++D++DEE+KI+ FF LI++T+ +RDR++S     E K             KG  VWNP FQPEDFI+D   +  ++  
Subjt:  MEGGRKRRKLQNNEKEEEEEEDNDDEDEEEKIKLFFALIQNTKAMRDRMKSKESAEEEKS------------KG--VWNPKFQPEDFIEDGNYNNKSNI-

Query:  TIQLPAASSSTTKQSNEKREQEEQEDKDKVGKGKNGLDLNLSL
          Q P  S STTK +       E+ED+D+   G +GLDLNLSL
Subjt:  TIQLPAASSSTTKQSNEKREQEEQEDKDKVGKGKNGLDLNLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGAGGAAGAAAAAGAAGAAAATTGCAGAATAATGAGAAAGAAGAAGAAGAAGAAGAAGATAATGATGATGAAGATGAAGAAGAAAAGATAAAGTTGTTCTTTGC
TCTGATTCAAAACACAAAAGCCATGAGAGACAGAATGAAATCAAAAGAATCAGCAGAAGAAGAGAAATCAAAAGGGGTTTGGAATCCAAAGTTCCAACCAGAAGATTTCA
TTGAAGATGGAAATTACAACAACAAATCCAACATCACTATTCAATTACCAGCTGCTTCATCTTCAACAACAAAACAGAGCAATGAAAAGAGAGAACAAGAAGAACAAGAA
GATAAAGACAAGGTAGGAAAAGGAAAAAATGGGCTTGACCTTAATCTCTCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGAGGAAGAAAAAGAAGAAAATTGCAGAATAATGAGAAAGAAGAAGAAGAAGAAGAAGATAATGATGATGAAGATGAAGAAGAAAAGATAAAGTTGTTCTTTGC
TCTGATTCAAAACACAAAAGCCATGAGAGACAGAATGAAATCAAAAGAATCAGCAGAAGAAGAGAAATCAAAAGGGGTTTGGAATCCAAAGTTCCAACCAGAAGATTTCA
TTGAAGATGGAAATTACAACAACAAATCCAACATCACTATTCAATTACCAGCTGCTTCATCTTCAACAACAAAACAGAGCAATGAAAAGAGAGAACAAGAAGAACAAGAA
GATAAAGACAAGGTAGGAAAAGGAAAAAATGGGCTTGACCTTAATCTCTCTCTTTGA
Protein sequenceShow/hide protein sequence
MEGGRKRRKLQNNEKEEEEEEDNDDEDEEEKIKLFFALIQNTKAMRDRMKSKESAEEEKSKGVWNPKFQPEDFIEDGNYNNKSNITIQLPAASSSTTKQSNEKREQEEQE
DKDKVGKGKNGLDLNLSL