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Lsi11G006590 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G006590
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein NIM1-INTERACTING 1
Genome locationchr11:6909194..6909544
RNA-Seq ExpressionLsi11G006590
SyntenyLsi11G006590
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR031425 - NPR1/NH1-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599168.1 hypothetical protein SDJN03_08946, partial [Cucurbita argyrosperma subsp. sororia]8.4e-2555.71Show/hide
Query:  MERGRKRRRLE--EEEEDDEE-------------KLFFALIQNTKAIRDRMKSKDQSTEEEKSKGVWNPKFQPEDFIEDG--NYNNKSNITLQLLAASSS
        ME GRKRR+L+  EE++DDEE             KLFFALIQNTKA+RD++KSK+ + E+  +KGVWNPKFQPEDFIEDG   + +KS   ++L AASSS
Subjt:  MERGRKRRRLE--EEEEDDEE-------------KLFFALIQNTKAIRDRMKSKDQSTEEEKSKGVWNPKFQPEDFIEDG--NYNNKSNITLQLLAASSS

Query:  TTKQSNPKKEQQE-------QEHKHKVGKGKMGLDLNLSL
         TKQSN K+E QE       QEH+ ++ + K GLDLNLSL
Subjt:  TTKQSNPKKEQQE-------QEHKHKVGKGKMGLDLNLSL

KGN61024.1 hypothetical protein Csa_021295 [Cucumis sativus]7.3e-2970.49Show/hide
Query:  MERGRKRRRLEEEEEDDEE---KLFFALIQNTKAIRDRMKSKDQSTEEEKSKGVWNPKFQPEDF-IEDG-NYNNKSN-ITLQLLAASSSTTKQSNPKKEQ
        ME GRKRR+L+EEEE++E+   +LF+ALIQNTKA+RD MK   + TEEEKSKGVWNPKFQPEDF  EDG NYNNKSN I LQL AASSSTTKQ N KK+Q
Subjt:  MERGRKRRRLEEEEEDDEE---KLFFALIQNTKAIRDRMKSKDQSTEEEKSKGVWNPKFQPEDF-IEDG-NYNNKSN-ITLQLLAASSSTTKQSNPKKEQ

Query:  QEQEHKHKVGKGKMGLDLNLSL
        +E +H +KV + K GLDLNLSL
Subjt:  QEQEHKHKVGKGKMGLDLNLSL

XP_038889660.1 protein NIM1-INTERACTING 3 isoform X1 [Benincasa hispida]3.4e-3480.73Show/hide
Query:  MERGRKRRRLEEEEEDDEE-----KLFFALIQNTKAIRDRMKSKDQSTEEEKSKGVWNPKFQPEDFIEDGNYNNKSNITLQLLAASSSTTKQSNPKKEQQ
        MERGRKRR+LEEEEE+D++     KL FALIQN KA+R RMKSK +S EEEKSKGVWNPKFQPEDFIEDG YNNKSNITLQL AASSSTTK SNPKKEQQ
Subjt:  MERGRKRRRLEEEEEDDEE-----KLFFALIQNTKAIRDRMKSKDQSTEEEKSKGVWNPKFQPEDFIEDGNYNNKSNITLQLLAASSSTTKQSNPKKEQQ

Query:  EQEHKHKVG
        EQ+ KHKVG
Subjt:  EQEHKHKVG

XP_038889661.1 protein NIM1-INTERACTING 3 isoform X2 [Benincasa hispida]6.4e-3380.37Show/hide
Query:  MERGRKRRRLEEEEEDDEE-----KLFFALIQNTKAIRDRMKSKDQSTEEEKSKGVWNPKFQPEDFIEDGNYNNKSNITLQLLAASSSTTKQSNPKKEQQ
        MERGRKRR+LEEEEE+D++     KL FALIQN KA+R RMKSK +S EEEKSKGVWNPKFQPEDFIEDG YNNKSNITLQL AASSSTTK SNPKKEQQ
Subjt:  MERGRKRRRLEEEEEDDEE-----KLFFALIQNTKAIRDRMKSKDQSTEEEKSKGVWNPKFQPEDFIEDGNYNNKSNITLQLLAASSSTTKQSNPKKEQQ

Query:  EQEHKHK
        EQ+ KHK
Subjt:  EQEHKHK

XP_038889662.1 protein NIM1-INTERACTING 3 isoform X3 [Benincasa hispida]6.4e-3380.37Show/hide
Query:  MERGRKRRRLEEEEEDDEE-----KLFFALIQNTKAIRDRMKSKDQSTEEEKSKGVWNPKFQPEDFIEDGNYNNKSNITLQLLAASSSTTKQSNPKKEQQ
        MERGRKRR+LEEEEE+D++     KL FALIQN KA+R RMKSK +S EEEKSKGVWNPKFQPEDFIEDG YNNKSNITLQL AASSSTTK SNPKKEQQ
Subjt:  MERGRKRRRLEEEEEDDEE-----KLFFALIQNTKAIRDRMKSKDQSTEEEKSKGVWNPKFQPEDFIEDGNYNNKSNITLQLLAASSSTTKQSNPKKEQQ

Query:  EQEHKHK
        EQ+ KHK
Subjt:  EQEHKHK

TrEMBL top hitse value%identityAlignment
A0A0A0LJ23 Uncharacterized protein3.5e-2970.49Show/hide
Query:  MERGRKRRRLEEEEEDDEE---KLFFALIQNTKAIRDRMKSKDQSTEEEKSKGVWNPKFQPEDF-IEDG-NYNNKSN-ITLQLLAASSSTTKQSNPKKEQ
        ME GRKRR+L+EEEE++E+   +LF+ALIQNTKA+RD MK   + TEEEKSKGVWNPKFQPEDF  EDG NYNNKSN I LQL AASSSTTKQ N KK+Q
Subjt:  MERGRKRRRLEEEEEDDEE---KLFFALIQNTKAIRDRMKSKDQSTEEEKSKGVWNPKFQPEDF-IEDG-NYNNKSN-ITLQLLAASSSTTKQSNPKKEQ

Query:  QEQEHKHKVGKGKMGLDLNLSL
        +E +H +KV + K GLDLNLSL
Subjt:  QEQEHKHKVGKGKMGLDLNLSL

A0A4S4D4I8 Uncharacterized protein2.0e-1143.75Show/hide
Query:  ERGRKRRRLEEEEEDDEEKL--FFALIQNTKAIRDR-MKSKDQSTEEEKSKG----VWNPKFQPEDFIEDGNYNNK------SNITLQLLAASSSTTKQS
        +  RKR+   EEE+DDEEK+  FFALI++T+  R+R M   ++  EEEK KG     WNP FQPEDF+E G   +K      +++ L L  A  S  ++ 
Subjt:  ERGRKRRRLEEEEEDDEEKL--FFALIQNTKAIRDR-MKSKDQSTEEEKSKG----VWNPKFQPEDFIEDGNYNNK------SNITLQLLAASSSTTKQS

Query:  NPKKEQQEQEHKHKVGKGKMGLDLNLSL
          K+++QE+E  HK G    GLDL LSL
Subjt:  NPKKEQQEQEHKHKVGKGKMGLDLNLSL

A0A4V3WPK6 Uncharacterized protein9.7e-1147.58Show/hide
Query:  RKRRRLEEEEEDDEEKL--FFALIQNTKAIRDR-MKSKDQSTEEEKSKG----VWNPKFQPEDFIEDGNYNNKS-----NITLQLLAASSSTTKQSNPKK
        RKR+   EEE+DDEEK+  FFALI++T+  R R M   D+  EEEK+KG     WNP FQPEDF+E G   +K+       +L L  A +  +K+ +  K
Subjt:  RKRRRLEEEEEDDEEKL--FFALIQNTKAIRDR-MKSKDQSTEEEKSKG----VWNPKFQPEDFIEDGNYNNKS-----NITLQLLAASSSTTKQSNPKK

Query:  EQQEQEHKHKVGKGKMGLDLNLSL
        E QEQE  HK G    GLDL LSL
Subjt:  EQQEQEHKHKVGKGKMGLDLNLSL

A0A5C7GWM2 Uncharacterized protein3.7e-1038.36Show/hide
Query:  RKRRRL----EEEEEDDEEKL--FFALIQNTKAIRDRMKS-------------------------------KDQSTEEEKSKGVWNPKFQPEDFIEDGNY
        RK+R++    EEEEE++EEK+  F+AL++NTK +RDR++S                               K +  EE+    VWNP FQPEDF+ED N 
Subjt:  RKRRRL----EEEEEDDEEKL--FFALIQNTKAIRDRMKS-------------------------------KDQSTEEEKSKGVWNPKFQPEDFIEDGNY

Query:  NNKSNITLQL-------LAASSSTTKQSNPKKEQQEQEHKHKVG---KGKMGLDLNLSL
          KSN T+ L       LAAS+S  K   P+++QQ++E   K G      + LDLNLSL
Subjt:  NNKSNITLQL-------LAASSSTTKQSNPKKEQQEQEHKHKVG---KGKMGLDLNLSL

A0A6J1DQG7 LOW QUALITY PROTEIN: uncharacterized protein LOC1110232843.3e-1956Show/hide
Query:  MERGRKRRRL---------EEEEEDDEEKLFFALIQNTKAIRDRMKSKDQSTEEEKSKGVWNPKFQPEDFIEDGNYNNKSNITLQLLAASSSTTKQSNPK
        ME  R++R+L         E+EEE+++ KLFFALIQNTK+IRDR+KSK  + +++KSKGVWNPKFQPEDFIED   + KSN T Q   A+SS+TKQ N  
Subjt:  MERGRKRRRL---------EEEEEDDEEKLFFALIQNTKAIRDRMKSKDQSTEEEKSKGVWNPKFQPEDFIEDGNYNNKSNITLQLLAASSSTTKQSNPK

Query:  KEQQEQEHKHKVGKGKMGLDLNLSL
        K+++E++ K KV +G   LDLNLSL
Subjt:  KEQQEQEHKHKVGKGKMGLDLNLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G09415.1 NIM1-interacting 31.7e-0435.77Show/hide
Query:  MERGRKRRRLEEEEEDDEEKL--FFALIQNTKAIRDRMKS---KDQSTEEEKSKGVWNPKFQPEDFIEDGNYNNKSNITLQLLAA--SSSTTKQSNPKKE
        M+R RKR ++ E+E+D+EEK+   + +++N + +R  + S   K +  EEE+++    P FQPEDFI    + NK+       AA  SSS + + +  KE
Subjt:  MERGRKRRRLEEEEEDDEEKL--FFALIQNTKAIRDRMKS---KDQSTEEEKSKGVWNPKFQPEDFIEDGNYNNKSNITLQLLAA--SSSTTKQSNPKKE

Query:  QQEQEHKHKVGKGKMGLDLNLSL
        +QE    +      + LDLNLSL
Subjt:  QQEQEHKHKVGKGKMGLDLNLSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGAGGAAGAAAAAGAAGAAGGTTGGAAGAGGAAGAAGAAGATGATGAAGAGAAGTTGTTCTTTGCTCTGATTCAAAACACAAAAGCCATAAGAGACAGAATGAA
ATCAAAAGATCAATCAACAGAAGAAGAGAAATCAAAAGGGGTTTGGAATCCAAAGTTCCAACCAGAAGATTTCATTGAAGATGGAAATTACAACAACAAATCCAACATCA
CTCTTCAATTATTAGCTGCTTCATCTTCAACAACAAAACAGAGCAATCCAAAGAAAGAACAACAAGAACAAGAACATAAACACAAGGTAGGAAAAGGGAAAATGGGGCTT
GACCTTAATCTCTCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGAGGAAGAAAAAGAAGAAGGTTGGAAGAGGAAGAAGAAGATGATGAAGAGAAGTTGTTCTTTGCTCTGATTCAAAACACAAAAGCCATAAGAGACAGAATGAA
ATCAAAAGATCAATCAACAGAAGAAGAGAAATCAAAAGGGGTTTGGAATCCAAAGTTCCAACCAGAAGATTTCATTGAAGATGGAAATTACAACAACAAATCCAACATCA
CTCTTCAATTATTAGCTGCTTCATCTTCAACAACAAAACAGAGCAATCCAAAGAAAGAACAACAAGAACAAGAACATAAACACAAGGTAGGAAAAGGGAAAATGGGGCTT
GACCTTAATCTCTCTCTTTGA
Protein sequenceShow/hide protein sequence
MERGRKRRRLEEEEEDDEEKLFFALIQNTKAIRDRMKSKDQSTEEEKSKGVWNPKFQPEDFIEDGNYNNKSNITLQLLAASSSTTKQSNPKKEQQEQEHKHKVGKGKMGL
DLNLSL