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Lsi11G006600 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G006600
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUPF0725 protein At4g29550-like
Genome locationchr11:6914243..6915251
RNA-Seq ExpressionLsi11G006600
SyntenyLsi11G006600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022137488.1 uncharacterized protein LOC111008920 isoform X1 [Momordica charantia]2.9e-1337.21Show/hide
Query:  REWTKEEELLYYRTLNETEGFDAPKLPDNGTCGGLFRLSNCSLKRRYIRQCA----------EGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDY
        RE  +EE   YY+ + E+EGFD P  P       +  L   +L    +R+CA           GA FEFV++ KA SQ   G + +LT +V+  G P D 
Subjt:  REWTKEEELLYYRTLNETEGFDAPKLPDNGTCGGLFRLSNCSLKRRYIRQCA----------EGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDY

Query:  PTTSLQAKVLYGIGENNITTEFCGLTPGN
        PTT+LQA+VL GI  ++   + C   P N
Subjt:  PTTSLQAKVLYGIGENNITTEFCGLTPGN

XP_022137489.1 uncharacterized protein LOC111008920 isoform X2 [Momordica charantia]7.2e-1238.66Show/hide
Query:  REWTKEEELLYYRTLNETEGFDAPKLPDNGTCGGLFRLSNCSLKRRYIRQCAEGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVL
        RE  +EE   YY+ + E+EGFD P  P      G +  +  S          EGA FEFV++ KA SQ   G + +LT +V+  G P D PTT+LQA+VL
Subjt:  REWTKEEELLYYRTLNETEGFDAPKLPDNGTCGGLFRLSNCSLKRRYIRQCAEGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVL

Query:  YGIGENNITTEFCGLTPGN
         GI  ++   + C   P N
Subjt:  YGIGENNITTEFCGLTPGN

XP_022137526.1 uncharacterized protein LOC111008952 [Momordica charantia]1.7e-1334.13Show/hide
Query:  SEEDSDDIPDDPDWESESPIECEGDSSESEGEITDREEREWTKEEELLYYRTLNETEGFDAPKLPDNGTCGGLFRLSNCSLKRRYIRQCAE---------
        +  +S  + DD D   + P E         G     E RE T EEE+ YY  L +TEGFD P  PD+  CG +  ++   L    +++CA+         
Subjt:  SEEDSDDIPDDPDWESESPIECEGDSSESEGEITDREEREWTKEEELLYYRTLNETEGFDAPKLPDNGTCGGLFRLSNCSLKRRYIRQCAE---------

Query:  ---GADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIGENNITTEFCGLTP
           G  FEFV++ KA ++ V G M YLT +V+  G P + PT +LQA+VL G+   +   E C   P
Subjt:  ---GADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIGENNITTEFCGLTP

XP_022975633.1 uncharacterized protein LOC111475320 [Cucurbita maxima]1.2e-0631.13Show/hide
Query:  IECEGDSSESEGEITDREEREWTKEEELLYYRTLNETEGFDAPKLPDNGTCG-----------GLFRLSNCSLKRRYIRQCAE-GADFEFVEIEKACSQI
        +E E +  +S+ E         TK+EE+ Y+  +NE++GFD P        G            LF+    S         +E G +FE V+I KA  + 
Subjt:  IECEGDSSESEGEITDREEREWTKEEELLYYRTLNETEGFDAPKLPDNGTCG-----------GLFRLSNCSLKRRYIRQCAE-GADFEFVEIEKACSQI

Query:  VCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIG-ENNITTEFCGLTPGN
         CG M Y+T  V+P G  +++P+ + QAKV Y I  ++ I  E C   P N
Subjt:  VCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIG-ENNITTEFCGLTPGN

XP_023525925.1 uncharacterized protein LOC111789396 [Cucurbita pepo subsp. pepo]1.6e-0632.75Show/hide
Query:  ASSSSSKPSRPPMSEYHPSEEDSDDIPDDPDWESESPIECEGDSSESEGEITDREEREWTKEEELLYYRTLNETEGFDAPKLPDNGTCGGLFRLSNCSLK
        ASS+S+  S+P      P+    D +   P          + D S+ E E      R   +EE   YY+ L +T+GFD P  P+    G +  +    L 
Subjt:  ASSSSSKPSRPPMSEYHPSEEDSDDIPDDPDWESESPIECEGDSSESEGEITDREEREWTKEEELLYYRTLNETEGFDAPKLPDNGTCGGLFRLSNCSLK

Query:  RRYIRQCAE----------GADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIGE
        + Y+R CAE          G +FEFV+I KA  Q+V G   Y+T  V+  G  +++PTT+ +AKVL GI +
Subjt:  RRYIRQCAE----------GADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIGE

TrEMBL top hitse value%identityAlignment
A0A6J1C7D4 uncharacterized protein LOC111008920 isoform X23.5e-1238.66Show/hide
Query:  REWTKEEELLYYRTLNETEGFDAPKLPDNGTCGGLFRLSNCSLKRRYIRQCAEGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVL
        RE  +EE   YY+ + E+EGFD P  P      G +  +  S          EGA FEFV++ KA SQ   G + +LT +V+  G P D PTT+LQA+VL
Subjt:  REWTKEEELLYYRTLNETEGFDAPKLPDNGTCGGLFRLSNCSLKRRYIRQCAEGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVL

Query:  YGIGENNITTEFCGLTPGN
         GI  ++   + C   P N
Subjt:  YGIGENNITTEFCGLTPGN

A0A6J1C8H7 uncharacterized protein LOC1110089528.3e-1434.13Show/hide
Query:  SEEDSDDIPDDPDWESESPIECEGDSSESEGEITDREEREWTKEEELLYYRTLNETEGFDAPKLPDNGTCGGLFRLSNCSLKRRYIRQCAE---------
        +  +S  + DD D   + P E         G     E RE T EEE+ YY  L +TEGFD P  PD+  CG +  ++   L    +++CA+         
Subjt:  SEEDSDDIPDDPDWESESPIECEGDSSESEGEITDREEREWTKEEELLYYRTLNETEGFDAPKLPDNGTCGGLFRLSNCSLKRRYIRQCAE---------

Query:  ---GADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIGENNITTEFCGLTP
           G  FEFV++ KA ++ V G M YLT +V+  G P + PT +LQA+VL G+   +   E C   P
Subjt:  ---GADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIGENNITTEFCGLTP

A0A6J1CAH1 uncharacterized protein LOC111008920 isoform X11.4e-1337.21Show/hide
Query:  REWTKEEELLYYRTLNETEGFDAPKLPDNGTCGGLFRLSNCSLKRRYIRQCA----------EGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDY
        RE  +EE   YY+ + E+EGFD P  P       +  L   +L    +R+CA           GA FEFV++ KA SQ   G + +LT +V+  G P D 
Subjt:  REWTKEEELLYYRTLNETEGFDAPKLPDNGTCGGLFRLSNCSLKRRYIRQCA----------EGADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDY

Query:  PTTSLQAKVLYGIGENNITTEFCGLTPGN
        PTT+LQA+VL GI  ++   + C   P N
Subjt:  PTTSLQAKVLYGIGENNITTEFCGLTPGN

A0A6J1FN74 uncharacterized protein LOC1114473303.7e-0630.46Show/hide
Query:  IECEGDSSESEGEITDREEREWTKEEELLYYRTLNETEGFDAP--------------KLPDNGTCGGLFRLSNCSLKRRYIRQCAEGADFEFVEIEKACS
        +E E +  +S+ E         TK+EE+ YY  + E++GFD P              KL +        ++S     + Y  +   G +FE V+I KA  
Subjt:  IECEGDSSESEGEITDREEREWTKEEELLYYRTLNETEGFDAP--------------KLPDNGTCGGLFRLSNCSLKRRYIRQCAEGADFEFVEIEKACS

Query:  QIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIG-ENNITTEFCGLTP
           CG M Y+T  V+P G P ++P+ + QAKV Y I  ++ I  E C   P
Subjt:  QIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIG-ENNITTEFCGLTP

A0A6J1IJT3 uncharacterized protein LOC1114753205.8e-0731.13Show/hide
Query:  IECEGDSSESEGEITDREEREWTKEEELLYYRTLNETEGFDAPKLPDNGTCG-----------GLFRLSNCSLKRRYIRQCAE-GADFEFVEIEKACSQI
        +E E +  +S+ E         TK+EE+ Y+  +NE++GFD P        G            LF+    S         +E G +FE V+I KA  + 
Subjt:  IECEGDSSESEGEITDREEREWTKEEELLYYRTLNETEGFDAPKLPDNGTCG-----------GLFRLSNCSLKRRYIRQCAE-GADFEFVEIEKACSQI

Query:  VCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIG-ENNITTEFCGLTPGN
         CG M Y+T  V+P G  +++P+ + QAKV Y I  ++ I  E C   P N
Subjt:  VCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIG-ENNITTEFCGLTPGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTCGTCGTCTTCCAAACCCTCCCGGCCTCCTATGTCGGAGTATCATCCATCAGAAGAGGACAGTGACGATATCCCTGACGACCCTGACTGGGAGTCTGAATC
TCCAATAGAGTGCGAAGGTGACTCCTCGGAGTCGGAAGGTGAGATCACAGATCGGGAAGAGCGTGAGTGGACCAAAGAAGAAGAGCTCCTCTACTACCGTACATTGAATG
AAACAGAGGGGTTCGATGCTCCGAAACTTCCTGATAATGGTACCTGTGGTGGACTTTTTCGGCTTTCCAACTGCAGTCTAAAGCGCCGTTATATTCGACAATGTGCTGAG
GGTGCCGACTTTGAGTTTGTGGAGATTGAAAAGGCTTGCAGTCAGATTGTGTGTGGTTGCATGCTTTACCTTACTCTCAAGGTTAGGCCTAAGGGGATGCCTTCCGATTA
CCCAACCACTTCCCTTCAGGCCAAAGTGCTCTACGGAATTGGGGAAAACAATATTACTACTGAATTCTGCGGACTTACACCTGGTAATTAA
mRNA sequenceShow/hide mRNA sequence
AAACAAAAAAAAAAACCCTAAAAATGGAAGCTAACCAAGCTCCGTCCGTCCCACAATTTTATCTTTCCCCTTTTGTTTCTCCTCCAAGATTATAGTGTTAGGGTTTATAG
GGTTTGATGTTTGTGCGTTGTTAGTTTGAATTAGCTGATATTATTTGCTCGACGATGGCTTCCTCGTCGTCTTCCAAACCCTCCCGGCCTCCTATGTCGGAGTATCATCC
ATCAGAAGAGGACAGTGACGATATCCCTGACGACCCTGACTGGGAGTCTGAATCTCCAATAGAGTGCGAAGGTGACTCCTCGGAGTCGGAAGGTGAGATCACAGATCGGG
AAGAGCGTGAGTGGACCAAAGAAGAAGAGCTCCTCTACTACCGTACATTGAATGAAACAGAGGGGTTCGATGCTCCGAAACTTCCTGATAATGGTACCTGTGGTGGACTT
TTTCGGCTTTCCAACTGCAGTCTAAAGCGCCGTTATATTCGACAATGTGCTGAGGGTGCCGACTTTGAGTTTGTGGAGATTGAAAAGGCTTGCAGTCAGATTGTGTGTGG
TTGCATGCTTTACCTTACTCTCAAGGTTAGGCCTAAGGGGATGCCTTCCGATTACCCAACCACTTCCCTTCAGGCCAAAGTGCTCTACGGAATTGGGGAAAACAATATTA
CTACTGAATTCTGCGGACTTACACCTGGTAATTAA
Protein sequenceShow/hide protein sequence
MASSSSSKPSRPPMSEYHPSEEDSDDIPDDPDWESESPIECEGDSSESEGEITDREEREWTKEEELLYYRTLNETEGFDAPKLPDNGTCGGLFRLSNCSLKRRYIRQCAE
GADFEFVEIEKACSQIVCGCMLYLTLKVRPKGMPSDYPTTSLQAKVLYGIGENNITTEFCGLTPGN