; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G006730 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G006730
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLoricrin
Genome locationchr11:7082666..7085285
RNA-Seq ExpressionLsi11G006730
SyntenyLsi11G006730
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599154.1 hypothetical protein SDJN03_08932, partial [Cucurbita argyrosperma subsp. sororia]6.3e-5979.29Show/hide
Query:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGK-KGFGKAKQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVT
        MLESG+AEN++SDVGCSGVNDDGDDEDDE RK+MAK QI           ++GK KGFGKAK+VM YPFRKAKKQILRRRIKR     SSSCS SSSSV 
Subjt:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGK-KGFGKAKQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVT

Query:  CTRRTNSSDKRGFDGSVNQGCGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL
        CTRRT+SSDKR FDGSVNQGCGFCF KLSISDSKNG PTDPNHRKF+ EMLKVLIEKNDFYSKESNPHL
Subjt:  CTRRTNSSDKRGFDGSVNQGCGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL

XP_008452984.1 PREDICTED: uncharacterized protein LOC103493824 [Cucumis melo]2.1e-7591.72Show/hide
Query:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKAKQVMFYPFRKAKKQILRRRIKRASS-SSSSSCSPSSSSVT
        MLES HAENNISDVGCSGVNDDGDDEDDETR TMAKTQI DDEFDDDRKME+GKKGFGKAKQVMFYPFRKAKKQILRRRIKR SS SSSS CS SS SV 
Subjt:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKAKQVMFYPFRKAKKQILRRRIKRASS-SSSSSCSPSSSSVT

Query:  CTRRTNSSDKRGFDGSVNQGCGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL
        C+RRTNS DKRGFDGSVNQGCGFC TKLSISDSKNGSPTDPNHRKFT EMLKVLIEKNDFYSKESNPHL
Subjt:  CTRRTNSSDKRGFDGSVNQGCGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL

XP_011648888.1 uncharacterized protein LOC101216013 [Cucumis sativus]1.8e-7491.02Show/hide
Query:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKAKQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVTC
        MLES HAENNISDVGCSGVNDDGDDEDDETR TMAKTQI DDEFDDDRKME+GKKGFGKAKQVMFYPFRKAKKQILRRRIKR      SSCS SSSSVTC
Subjt:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKAKQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVTC

Query:  TRRTNSSDKRGFDGSVNQGCGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPH
        +RRTNS DKRGFDGSVNQGCGFC TKLSISDSKNGSPTDPNHRKFT EMLKVLIEKNDFYSKESNPH
Subjt:  TRRTNSSDKRGFDGSVNQGCGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPH

XP_023545330.1 uncharacterized protein LOC111804772 [Cucurbita pepo subsp. pepo]1.6e-5978.57Show/hide
Query:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKAKQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVTC
        MLESG+AEN++SDVGCSGVNDDGDDEDDE RK+MAK QI   +  +       +KGFGKAK+VM YPFRKAKKQILRRRIKR     SSSCS SSSSV C
Subjt:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKAKQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVTC

Query:  TRRTNSSDKRGFDGSVNQGCGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL
        TRRT+SSDKR FDGSVNQGCGFCF KLSISD KNG PTDPNHRKFT EMLKVLIEKNDFYSKESNPHL
Subjt:  TRRTNSSDKRGFDGSVNQGCGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL

XP_038890967.1 uncharacterized protein LOC120080390 [Benincasa hispida]5.8e-7390.48Show/hide
Query:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKAKQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVTC
        MLES HAENNISDVGCSG NDDGDDEDDETRKTMA TQI  DEFDDDRKME+GKKGFGKAKQVMFYPFRKAKKQILRRRIK    S+SSSC  SSSSVTC
Subjt:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKAKQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVTC

Query:  TRRTNSSDKRGFDGSVNQGCGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL
        TR+TNSSDKRGFDGSVNQGCGFCFTKLSISDSKNGSPTDPN+RKFT EMLKVLIEKNDFYSKESNPHL
Subjt:  TRRTNSSDKRGFDGSVNQGCGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL

TrEMBL top hitse value%identityAlignment
A0A0A0LH19 Uncharacterized protein8.8e-7591.02Show/hide
Query:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKAKQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVTC
        MLES HAENNISDVGCSGVNDDGDDEDDETR TMAKTQI DDEFDDDRKME+GKKGFGKAKQVMFYPFRKAKKQILRRRIKR      SSCS SSSSVTC
Subjt:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKAKQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVTC

Query:  TRRTNSSDKRGFDGSVNQGCGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPH
        +RRTNS DKRGFDGSVNQGCGFC TKLSISDSKNGSPTDPNHRKFT EMLKVLIEKNDFYSKESNPH
Subjt:  TRRTNSSDKRGFDGSVNQGCGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPH

A0A1S3BWA1 uncharacterized protein LOC1034938241.0e-7591.72Show/hide
Query:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKAKQVMFYPFRKAKKQILRRRIKRASS-SSSSSCSPSSSSVT
        MLES HAENNISDVGCSGVNDDGDDEDDETR TMAKTQI DDEFDDDRKME+GKKGFGKAKQVMFYPFRKAKKQILRRRIKR SS SSSS CS SS SV 
Subjt:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKAKQVMFYPFRKAKKQILRRRIKRASS-SSSSSCSPSSSSVT

Query:  CTRRTNSSDKRGFDGSVNQGCGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL
        C+RRTNS DKRGFDGSVNQGCGFC TKLSISDSKNGSPTDPNHRKFT EMLKVLIEKNDFYSKESNPHL
Subjt:  CTRRTNSSDKRGFDGSVNQGCGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL

A0A6J1DRZ8 uncharacterized protein LOC1110233072.5e-5375Show/hide
Query:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKAKQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVTC
        MLESGHAE N+SDVGCSGVNDD DDEDDET KTMA  QIG D  DDD K   GK+GFGKAKQV+ YPFRKAKKQILRR+IKRA          SSSS T 
Subjt:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKAKQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVTC

Query:  TRRTNSSDKRGFDGSVNQGCGFCFTKLSISDSKNGS-PTDPNHRKFTYEMLKVLIEKNDFYSKESNPHLVSK
        T RT SSDKR  DGSVNQGCGFCF +L ISDSKNGS  TDPN+RKFT EMLK+LIEKNDFYSKE NPHL SK
Subjt:  TRRTNSSDKRGFDGSVNQGCGFCFTKLSISDSKNGS-PTDPNHRKFTYEMLKVLIEKNDFYSKESNPHLVSK

A0A6J1G2R9 uncharacterized protein LOC1114502628.3e-5776.92Show/hide
Query:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGK-KGFGKAKQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVT
        MLESG+AEN++SDVGCSGVNDD DDEDDE RK+MAK QI           ++GK KGFGKAK+VM YPFRKAKKQILRRRIKR     SSSCS SSSSV 
Subjt:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGK-KGFGKAKQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVT

Query:  CTRRTNSSDKRGFDGSVNQGCGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL
        C RRT+SSDK  FDGSVNQGCGFCF KLSISD KNG PTDPNHRKFT +MLKVLIEKNDFYSKESNPHL
Subjt:  CTRRTNSSDKRGFDGSVNQGCGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL

A0A6J1KI22 uncharacterized protein LOC1114940226.8e-5979.29Show/hide
Query:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGK-KGFGKAKQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVT
        MLESG+AEN++SDVGCSGVNDDGDDED+E RK+MAK QI           ++GK KGFGKAK+VM YPFRKAKKQILRRRIKR     SSSCS SSSSV 
Subjt:  MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGK-KGFGKAKQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVT

Query:  CTRRTNSSDKRGFDGSVNQGCGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL
        CTRRT+SSDKR FDGSVNQGCGFCF KLSISDSKNG PTDPNHRKFT EMLKVLIEKNDFYSKESNPHL
Subjt:  CTRRTNSSDKRGFDGSVNQGCGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAATCAGGACATGCTGAGAATAATATCTCAGATGTTGGTTGCAGTGGTGTTAATGACGATGGCGATGATGAAGATGACGAGACTCGTAAAACTATGGCGAAGAC
CCAAATCGGGGATGATGAGTTTGATGATGATCGAAAAATGGAGATTGGTAAAAAGGGTTTTGGGAAGGCGAAACAGGTGATGTTCTATCCATTTCGAAAGGCGAAGAAAC
AAATTCTTCGGCGGAGGATTAAGAGGGCTTCTTCTTCTTCTTCTTCTTCTTGTTCGCCCTCTTCTTCTTCTGTTACTTGTACTAGAAGAACAAATTCTTCGGATAAGAGG
GGTTTTGATGGGAGTGTTAATCAGGGTTGTGGTTTCTGTTTTACCAAACTTTCAATTTCAGATTCTAAGAATGGGTCTCCAACTGACCCTAATCACCGGAAGTTCACTTA
TGAAATGTTGAAAGTTCTTATTGAGAAGAATGATTTCTATTCCAAAGAATCCAATCCTCACTTGGTTTCCAAGAAGCCTCATTTGCATTCGTTGCTATGTGATCAAATGC
ATGCAAATTTAATTCAAGCGGCTAGCCTTAACCATCCCTTTTCCCTTGTTCATTCAACTAGCGACCAAGAAGTTATGGTGGAGGATGAAGTTGATGATTTCGATGAGGCC
ATTGCTAATGTTTGTAACATTGGTTCAGAAAATCTGCATACTGATGAGAAGATGGAGATTTTTCTGGAGATCGTCATTGTTCTTTTGTTTGATGATAAACAATTTGGATT
AGAGTTCCCTCCCTCTTTCGAAGCTATTTCTATGAAGCCATGGACTTATTCGGGTCTCTCTAAGTCAAGGTTTTATTGCAATTGTTGGTTTTCGGCTGCCAAGTCATTTT
GTGGGCTGGAGTTTTCTTTTGATAGCCTCGTTGGTGGTCTTTCTGCTTTTGAACGT
mRNA sequenceShow/hide mRNA sequence
GATACAGAAAATCAGGTTGTCAGTGATTACCTTTCTTTGAACAAAAGGCCAAAAAATAAAATCATCCAGACATGCCCATCACTCTTCAATCCACCAAATTGGCGCCACCT
GCCTCTGTTCATCCAAGACCCACATCACTTGGAAGTTTAAATTTCTAGATTTCTCAAACAAATTACCCTTCTGATTCTGATTCTCACTGTAAACAAAAAAAACCAAACAC
AACCCAATTTGTTCTTCAATTCAATTCAATTCAATTCAATCCAATCCGATTCCATCCCAAATCCCTGTTTTCTTCACCCTTTTCTACTTGTTTTTTAGTTTGGGAATTTA
CATATATATATGTTGGAATCAGGACATGCTGAGAATAATATCTCAGATGTTGGTTGCAGTGGTGTTAATGACGATGGCGATGATGAAGATGACGAGACTCGTAAAACTAT
GGCGAAGACCCAAATCGGGGATGATGAGTTTGATGATGATCGAAAAATGGAGATTGGTAAAAAGGGTTTTGGGAAGGCGAAACAGGTGATGTTCTATCCATTTCGAAAGG
CGAAGAAACAAATTCTTCGGCGGAGGATTAAGAGGGCTTCTTCTTCTTCTTCTTCTTCTTGTTCGCCCTCTTCTTCTTCTGTTACTTGTACTAGAAGAACAAATTCTTCG
GATAAGAGGGGTTTTGATGGGAGTGTTAATCAGGGTTGTGGTTTCTGTTTTACCAAACTTTCAATTTCAGATTCTAAGAATGGGTCTCCAACTGACCCTAATCACCGGAA
GTTCACTTATGAAATGTTGAAAGTTCTTATTGAGAAGAATGATTTCTATTCCAAAGAATCCAATCCTCACTTGGTTTCCAAGAAGCCTCATTTGCATTCGTTGCTATGTG
ATCAAATGCATGCAAATTTAATTCAAGCGGCTAGCCTTAACCATCCCTTTTCCCTTGTTCATTCAACTAGCGACCAAGAAGTTATGGTGGAGGATGAAGTTGATGATTTC
GATGAGGCCATTGCTAATGTTTGTAACATTGGTTCAGAAAATCTGCATACTGATGAGAAGATGGAGATTTTTCTGGAGATCGTCATTGTTCTTTTGTTTGATGATAAACA
ATTTGGATTAGAGTTCCCTCCCTCTTTCGAAGCTATTTCTATGAAGCCATGGACTTATTCGGGTCTCTCTAAGTCAAGGTTTTATTGCAATTGTTGGTTTTCGGCTGCCA
AGTCATTTTGTGGGCTGGAGTTTTCTTTTGATAGCCTCGTTGGTGGTCTTTCTGCTTTTGAACGT
Protein sequenceShow/hide protein sequence
MLESGHAENNISDVGCSGVNDDGDDEDDETRKTMAKTQIGDDEFDDDRKMEIGKKGFGKAKQVMFYPFRKAKKQILRRRIKRASSSSSSSCSPSSSSVTCTRRTNSSDKR
GFDGSVNQGCGFCFTKLSISDSKNGSPTDPNHRKFTYEMLKVLIEKNDFYSKESNPHLVSKKPHLHSLLCDQMHANLIQAASLNHPFSLVHSTSDQEVMVEDEVDDFDEA
IANVCNIGSENLHTDEKMEIFLEIVIVLLFDDKQFGLEFPPSFEAISMKPWTYSGLSKSRFYCNCWFSAAKSFCGLEFSFDSLVGGLSAFER