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Lsi11G006900 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G006900
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUPF0057 membrane protein
Genome locationchr11:7280057..7280808
RNA-Seq ExpressionLsi11G006900
SyntenyLsi11G006900
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000612 - Proteolipid membrane potential modulator


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008452728.1 PREDICTED: UPF0057 membrane protein At4g30660 [Cucumis melo]1.2e-3292.11Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYSPAS
        M NGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGY+PGIIYA+YAI F+DRDQFFDEYRRPLYS AS
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYSPAS

XP_022158160.1 UPF0057 membrane protein At2g24040-like [Momordica charantia]6.6e-3492.31Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYSPASTV
        MANGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGY+PGIIYALYAIVF+DRDQFFDEYRRPLY+P S V
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYSPASTV

XP_022938010.1 UPF0057 membrane protein At4g30660-like [Cucurbita moschata]3.6e-3291.03Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYSPASTV
        MANGCEI CEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGYIPGIIYALY+IVF+DRD FFDEYRRPLYSP  TV
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYSPASTV

XP_022946545.1 UPF0057 membrane protein At2g24040-like [Cucurbita moschata]1.5e-3393.59Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYSPASTV
        MANGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGYIPGIIYALYAIV++DRDQFFDEYRRPLYS AS V
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYSPASTV

XP_038890692.1 UPF0057 membrane protein At4g30660-like [Benincasa hispida]7.1e-3697.44Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYSPASTV
        MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVF+DRDQFFDEYRRPLY+PASTV
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYSPASTV

TrEMBL top hitse value%identityAlignment
A0A1S3BTY7 UPF0057 membrane protein At4g306606.1e-3392.11Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYSPAS
        M NGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGY+PGIIYA+YAI F+DRDQFFDEYRRPLYS AS
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYSPAS

A0A5A7UJR3 UPF0057 membrane protein6.1e-3392.11Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYSPAS
        M NGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGY+PGIIYA+YAI F+DRDQFFDEYRRPLYS AS
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYSPAS

A0A6J1DV17 UPF0057 membrane protein At2g24040-like3.2e-3492.31Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYSPASTV
        MANGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGY+PGIIYALYAIVF+DRDQFFDEYRRPLY+P S V
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYSPASTV

A0A6J1G463 UPF0057 membrane protein At2g24040-like7.1e-3493.59Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYSPASTV
        MANGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGYIPGIIYALYAIV++DRDQFFDEYRRPLYS AS V
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYSPASTV

A0A6J1KI35 UPF0057 membrane protein At2g24040-like7.1e-3493.59Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYSPASTV
        MANGCEICCEILIAILIPPLGVCLK GCCTVEFCLCLILTLLGYIPGIIYALYAIV++DRDQFFDEYRRPLYS AS V
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYSPASTV

SwissProt top hitse value%identityAlignment
A2Y075 Hydrophobic protein LTI6B1.4e-1069.23Show/hide
Query:  GCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAI
        G   C +ILIAI++PPLGV LKFG C  EF +CL+LT LGYIPGIIYA+YAI
Subjt:  GCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAI

O82232 UPF0057 membrane protein At2g240408.2e-2773.61Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLY
        MA+ CE+CCEI IAIL+PP+GVCL+ GCCTVEF +CLILT LGY+PGIIYA+YAI F+ RD++FDEYRRP+Y
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLY

Q9LRI7 Hydrophobic protein OSR84.5e-1761.76Show/hide
Query:  MANG-CEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEY
        MA+G C    EIL+AI++PPLGV L+FGCC++EFC+CL+LT+LGY+PGIIYA+Y +V +D DQ+  EY
Subjt:  MANG-CEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEY

Q9M095 UPF0057 membrane protein At4g306504.8e-1975.41Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRD
        MA+  E+ CEILIAIL+PPLGVCLK GCCTVEF +CL+LT+LGYIPGIIYALY IVF +R+
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRD

Q9SUI0 UPF0057 membrane protein At4g306603.4e-2569.86Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYS
        M + CEI CEI+IAIL+PPLGVC + GCCTVEF +CL+LT+LGY+PGIIYA+Y IVF  R+++FDEYRRP+YS
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYS

Arabidopsis top hitse value%identityAlignment
AT2G24040.1 Low temperature and salt responsive protein family5.8e-2873.61Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLY
        MA+ CE+CCEI IAIL+PP+GVCL+ GCCTVEF +CLILT LGY+PGIIYA+YAI F+ RD++FDEYRRP+Y
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLY

AT4G28088.1 Low temperature and salt responsive protein family1.7e-3286.11Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLY
        MANGCEICCEI+IAILIPPLGVCL+ GCCT EF +CLILTLLGY+PGIIYALYAIV++DRDQFFDEYRRPL+
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLY

AT4G30650.1 Low temperature and salt responsive protein family3.4e-2075.41Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRD
        MA+  E+ CEILIAIL+PPLGVCLK GCCTVEF +CL+LT+LGYIPGIIYALY IVF +R+
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRD

AT4G30660.1 Low temperature and salt responsive protein family2.4e-2669.86Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYS
        M + CEI CEI+IAIL+PPLGVC + GCCTVEF +CL+LT+LGY+PGIIYA+Y IVF  R+++FDEYRRP+YS
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYS

AT4G30660.2 Low temperature and salt responsive protein family2.4e-2669.86Show/hide
Query:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYS
        M + CEI CEI+IAIL+PPLGVC + GCCTVEF +CL+LT+LGY+PGIIYA+Y IVF  R+++FDEYRRP+YS
Subjt:  MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACGGATGTGAGATCTGCTGTGAGATTCTCATCGCCATCCTCATTCCTCCTCTAGGAGTTTGCCTCAAATTCGGCTGTTGCACGGTGGAATTTTGTCTGTGTTT
GATTTTGACACTTCTCGGTTATATTCCGGGGATCATTTACGCACTCTATGCCATTGTCTTCATCGATCGCGACCAGTTCTTTGATGAGTACAGGCGTCCGCTCTATTCGC
CGGCGTCGACGGTGTAG
mRNA sequenceShow/hide mRNA sequence
ACAGAATTGCCATAACTCTTCACAGATCAAAATCAACCAACTCTCTCTGAATCCTCTCTCTCTCTCTCGAAGATCGAAAATGGCGAACGGATGTGAGATCTGCTGTGAGA
TTCTCATCGCCATCCTCATTCCTCCTCTAGGAGTTTGCCTCAAATTCGGCTGTTGCACGGTGGAATTTTGTCTGTGTTTGATTTTGACACTTCTCGGTTATATTCCGGGG
ATCATTTACGCACTCTATGCCATTGTCTTCATCGATCGCGACCAGTTCTTTGATGAGTACAGGCGTCCGCTCTATTCGCCGGCGTCGACGGTGTAGAACCAGTTTGAATT
TCTTGATCTCTGTTTTAACTTTTCGAATAAGGTCTGGTTCTTTTGTAGTTTTTGGATATTGAATTGGCTTTGATTTACTTAGATTTGTGAGGATTTCTCTTTCTCGATTT
GATTTGGATTTTGTTGGGAGTATGGATGTGTGGTTATGAACTTAGAAGAAGTTAGAACTATGACCTTTGAAATAATGTGGGTGACACTAGAAAGTTAGAATAATGGATGA
AAGGCCTATTTGAAATCA
Protein sequenceShow/hide protein sequence
MANGCEICCEILIAILIPPLGVCLKFGCCTVEFCLCLILTLLGYIPGIIYALYAIVFIDRDQFFDEYRRPLYSPASTV