; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G006910 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G006910
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionF-box protein
Genome locationchr11:7286792..7289100
RNA-Seq ExpressionLsi11G006910
SyntenyLsi11G006910
Gene Ontology termsGO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR001810 - F-box domain
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056113.1 F-box protein SKIP1 [Cucumis melo var. makuwa]2.7e-16392.41Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRI
        MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCK W  AA DPSLFSHFDLEPRFES PTESPAWW PEFETKIDSMLRSAV WSLGSLS+IR+
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRI

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ
        RHCSDSSLDFVAQGCPNLEVLSIKSC NVTD SMAKIA GCQKLREVDISYCHEISNISLALIG+HCPNIKTLKRN+FN LDPSQHKGIVPD+YL+ACPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ

Query:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
        DVDSEAAAIAKFM NLEHLELGFSKLSAKAL+ ICEGCPNLKYLDLFGCVNLTSRDIANATS+L+NLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

KAG6599142.1 F-box protein SKIP1, partial [Cucurbita argyrosperma subsp. sororia]4.4e-15890.1Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRI
        MAEP     SWAELT ECLTNI SRLTIEQRWRGPMLVCKLW RAATD SLFSHFDLEPRF+S PTESPAWWSP+FE KIDSMLRSAV WSLGSLSLIRI
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRI

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ
        RHCSDSSL  VAQGCPNLEVLSIKSC NVTDRSMAKIALGCQKL+EVDISYCHEISN+SL+LIGKHCPNIKTLKRNFFN LDPSQ KGIVPDSYLNACPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ

Query:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
        DVDSEA AIAKFMPNLEHL+L FSKLSAKAL+LIC+GCPNLKYLDLFGCVNLTSRDI NATS+L+NLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

XP_008452697.1 PREDICTED: F-box protein SKIP1 [Cucumis melo]7.0e-16492.74Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRI
        MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCK W RAA DPSLFSHFDLEPRFES PTESPAWW PEFETKIDSMLRSAV WSLGSLS+IR+
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRI

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ
        RHCSDSSLDFVAQGCPNLEVLSIKSC NVTD SMAKIA GCQKLREVDISYCHEISNISLALIG+HCPNIKTLKRN+FN LDPSQHKGIVPD+YL+ACPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ

Query:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
        DVDSEAAAIAKFM NLEHLELGFSKLSAKAL+ ICEGCPNLKYLDLFGCVNLTSRDIANATS+L+NLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

XP_022946543.1 F-box protein SKIP1-like [Cucurbita moschata]1.2e-15890.43Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRI
        MAEP     SWAELT ECLTNI SRLTIEQRWRGPMLVCKLW RAATD SLFSHFDLEPRF+S PTESPAWWSP+FE KIDSMLRSAV WSLGSLSLIRI
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRI

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ
        RHCSDSSL  VAQGCPNLEVLSIKSC NVTDRSMAKIALGCQKL+EVDISYCHEISN+SL+LIGKHCPNIKTLKRNFFN LDPSQ KGIVPDSYLNACPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ

Query:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
        DVDSEA AIAKFMPNLEHL+L FSKLSAKAL+LIC+GCPNLKYLDLFGCVNLTSRDI NATSNL+NLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

XP_038890479.1 F-box protein SKIP1 [Benincasa hispida]3.5e-17196.04Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRI
        MAEP SESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFES PTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRI
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRI

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ
        RHCSDSSLDFVAQGCPNLEVLSIKSC NVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKT+KRNFFN LDPSQHKGIVPD+YLN+CPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ

Query:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
        DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCP LK+LDLFGCVNLTSRDIANATS+++NLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

TrEMBL top hitse value%identityAlignment
A0A1S3BUE6 F-box protein SKIP13.4e-16492.74Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRI
        MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCK W RAA DPSLFSHFDLEPRFES PTESPAWW PEFETKIDSMLRSAV WSLGSLS+IR+
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRI

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ
        RHCSDSSLDFVAQGCPNLEVLSIKSC NVTD SMAKIA GCQKLREVDISYCHEISNISLALIG+HCPNIKTLKRN+FN LDPSQHKGIVPD+YL+ACPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ

Query:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
        DVDSEAAAIAKFM NLEHLELGFSKLSAKAL+ ICEGCPNLKYLDLFGCVNLTSRDIANATS+L+NLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

A0A5A7UJH9 F-box protein SKIP11.3e-16392.41Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRI
        MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCK W  AA DPSLFSHFDLEPRFES PTESPAWW PEFETKIDSMLRSAV WSLGSLS+IR+
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRI

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ
        RHCSDSSLDFVAQGCPNLEVLSIKSC NVTD SMAKIA GCQKLREVDISYCHEISNISLALIG+HCPNIKTLKRN+FN LDPSQHKGIVPD+YL+ACPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ

Query:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
        DVDSEAAAIAKFM NLEHLELGFSKLSAKAL+ ICEGCPNLKYLDLFGCVNLTSRDIANATS+L+NLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

A0A5D3BD72 F-box protein SKIP13.4e-16492.74Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRI
        MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCK W RAA DPSLFSHFDLEPRFES PTESPAWW PEFETKIDSMLRSAV WSLGSLS+IR+
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRI

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ
        RHCSDSSLDFVAQGCPNLEVLSIKSC NVTD SMAKIA GCQKLREVDISYCHEISNISLALIG+HCPNIKTLKRN+FN LDPSQHKGIVPD+YL+ACPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ

Query:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
        DVDSEAAAIAKFM NLEHLELGFSKLSAKAL+ ICEGCPNLKYLDLFGCVNLTSRDIANATS+L+NLEIRKPNFYIPRSVFHTERY HWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

A0A6J1G461 F-box protein SKIP1-like5.6e-15990.43Show/hide
Query:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRI
        MAEP     SWAELT ECLTNI SRLTIEQRWRGPMLVCKLW RAATD SLFSHFDLEPRF+S PTESPAWWSP+FE KIDSMLRSAV WSLGSLSLIRI
Subjt:  MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRI

Query:  RHCSDSSLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ
        RHCSDSSL  VAQGCPNLEVLSIKSC NVTDRSMAKIALGCQKL+EVDISYCHEISN+SL+LIGKHCPNIKTLKRNFFN LDPSQ KGIVPDSYLNACPQ
Subjt:  RHCSDSSLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ

Query:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
        DVDSEA AIAKFMPNLEHL+L FSKLSAKAL+LIC+GCPNLKYLDLFGCVNLTSRDI NATSNL+NLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI
Subjt:  DVDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDI

Query:  FRI
        FRI
Subjt:  FRI

A0A6J1KKL1 F-box protein SKIP1-like4.7e-15891.19Show/hide
Query:  SSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIRHCSDSSL
        +SWAELT ECLTNI SRLTIEQRWRGPMLVCKLW RAATD SLFSHFDL+PRF+S PTESPAWWSP+FETKIDSMLRSAV WSLGSLSLIRIRHCSDSSL
Subjt:  SSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIRHCSDSSL

Query:  DFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQDVDSEAAA
          VAQGCPNLEVLSIKSC NVTDRSMAKIALGCQKL+EVDISYCHEISN+SL+LIGKHCPNIKTLKRNFFN LDPSQ KGIVPDSYLNACPQDVDSEA A
Subjt:  DFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQDVDSEAAA

Query:  IAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI
        IAKFMPNLEHLEL FSK+SAKAL+LIC+GCPNLKYLDLFGCVNLTSRDI NATS+L+NLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI
Subjt:  IAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI

SwissProt top hitse value%identityAlignment
Q9FDX1 F-box protein SKIP12.6e-9759Show/hide
Query:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIRHCSDS
        + S W  L  E L NI+SRLTI++ W GPM V K W     DP L+S FDLEP F+S P ES   WSPEFE K+D MLRS V WS G L+ IR+RHCSD 
Subjt:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIRHCSDS

Query:  SLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQDVDSEA
        +L + A  CPNL+VL+I+S PNVTD SM KIA  C+ L+E+DISYCHEIS+ +L +IG++CPN++ LKRN  ++   S+H G VP  YL+ACPQD D+EA
Subjt:  SLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQDVDSEA

Query:  AAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNL-EIRKPNFYIPRS--VFHTERYGHWRLYDERFQTDIFRI
         AI K M NLEHLE+ FS+LS K L+ ICEGCP L+YLDLFGCV+L+SRDI +  S L  L E++KP+ Y+PRS  V  TERYGHWRLYDERF     RI
Subjt:  AAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNL-EIRKPNFYIPRS--VFHTERYGHWRLYDERFQTDIFRI

Q9M096 Putative F-box/LRR-repeat protein 194.4e-7653.02Show/hide
Query:  WAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIRHCSDSSLDF
        W+ELT ECL +I SRL+ EQRW GPMLV K W  A  DP+L + FDLE RF S P ES  WW+PEFE K+DS LRS V  S G L+ IRIRHC++ SL +
Subjt:  WAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIRHCSDSSLDF

Query:  VAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQDVDSEAAAIA
         A+ CPNLEVL IK+CPNVTD SM KIA+ C  LRE+DISY + I++ SL  +G+ C N+K LKRN    L PS    + P  YL   P+  + EA  I 
Subjt:  VAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQDVDSEAAAIA

Query:  KFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNL-EIRKPNFYIPRSVFHTERYGHWR
        K+M  L+HLE+ +S L+A+ L  +C+GC NL+Y+DL GC++LT  DI   TS L NL EI KP+F  P +V    R G+ R
Subjt:  KFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNL-EIRKPNFYIPRSVFHTERYGHWR

Q9M0U9 F-box protein SKIP191.2e-2031.45Show/hide
Query:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIRHCSD-
        ES++W EL  E  + IL RL   +       VC+ W R   DPS++   D+    +            + +  ++ M R AV  S G L  I I +    
Subjt:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIRHCSD-

Query:  SSLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ-DVDS
          L+++A    NL  L +  C  +TD    + A+    L E+++SYC   S  SL ++G+ C N+KTLK                    LN  PQ + D 
Subjt:  SSLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ-DVDS

Query:  EAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNL
        +A AIA+ MP L HL+L  + LS   L+ I + C NL++LDL  C N+
Subjt:  EAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNL

Q9S9V8 Putative F-box/LRR-repeat protein 91.6e-2532.94Show/hide
Query:  AEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIR
        A  + E  +WAEL  E  ++IL RL   +  +    VCK W R   DPS++   D+  +   V        S E    I+ +   AV  S G L  I I 
Subjt:  AEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIR

Query:  HCSDSS-LDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ
        +  ++S L+++A    NL  L +  C  V  R + + A+    L E+DI+Y   I    L ++G+ CPN++TLK N                     C  
Subjt:  HCSDSS-LDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ

Query:  DV---DSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNL
        DV   D  A AIA+ MP L HL+L  + LS   L+ I EGCP+LK L L  C+N+
Subjt:  DV---DSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNL

Q9S9V9 Putative F-box/LRR-repeat protein 232.4e-2633.61Show/hide
Query:  SWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIRHCSDSSL-
        +WAEL  +  ++IL RL   +  +    VCK WHR   DPS++   D++ R +             F+  ++SM R AV  S G L  I I +   + L 
Subjt:  SWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIRHCSDSSL-

Query:  DFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQDVDSEAAA
         ++A    NL+ L +  C  +TD  +AK       L  +++SYC   S  SL  IG+ CPN+KTLK N              P+   +      D  A A
Subjt:  DFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQDVDSEAAA

Query:  IAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNL
        IA+ MP L HL+L  + L+ K L+ I +GCP+L++LDL  C N+
Subjt:  IAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNL

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein8.3e-2231.45Show/hide
Query:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIRHCSD-
        ES++W EL  E  + IL RL   +       VC+ W R   DPS++   D+    +            + +  ++ M R AV  S G L  I I +    
Subjt:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIRHCSD-

Query:  SSLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ-DVDS
          L+++A    NL  L +  C  +TD    + A+    L E+++SYC   S  SL ++G+ C N+KTLK                    LN  PQ + D 
Subjt:  SSLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ-DVDS

Query:  EAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNL
        +A AIA+ MP L HL+L  + LS   L+ I + C NL++LDL  C N+
Subjt:  EAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNL

AT4G05470.1 RNI-like superfamily protein2.4e-2130.56Show/hide
Query:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRI--RHCS
        E  +W +L  E  T+IL RL++         VCK W R   DPS+         +  + T     ++ +F     SM R  V  S G L  I +     S
Subjt:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRI--RHCS

Query:  DSSLDFVAQGCPNLEVLSIKSC-PNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYL--NACPQD
        DS L ++     NL  L +  C P VT   +         L  ++++  H    + L  IG  CP +KTLK N    L P+  K    DS +  +  P +
Subjt:  DSSLDFVAQGCPNLEVLSIKSC-PNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYL--NACPQD

Query:  VDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLT
         D +A AIA+ MP L HL+L  ++L+   L+ I +GCP+L++LD+  C  ++
Subjt:  VDSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLT

AT4G05497.1 RNI-like superfamily protein1.1e-2632.94Show/hide
Query:  AEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIR
        A  + E  +WAEL  E  ++IL RL   +  +    VCK W R   DPS++   D+  +   V        S E    I+ +   AV  S G L  I I 
Subjt:  AEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIR

Query:  HCSDSS-LDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ
        +  ++S L+++A    NL  L +  C  V  R + + A+    L E+DI+Y   I    L ++G+ CPN++TLK N                     C  
Subjt:  HCSDSS-LDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQ

Query:  DV---DSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNL
        DV   D  A AIA+ MP L HL+L  + LS   L+ I EGCP+LK L L  C+N+
Subjt:  DV---DSEAAAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNL

AT4G30640.1 RNI-like superfamily protein3.1e-7753.02Show/hide
Query:  WAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIRHCSDSSLDF
        W+ELT ECL +I SRL+ EQRW GPMLV K W  A  DP+L + FDLE RF S P ES  WW+PEFE K+DS LRS V  S G L+ IRIRHC++ SL +
Subjt:  WAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIRHCSDSSLDF

Query:  VAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQDVDSEAAAIA
         A+ CPNLEVL IK+CPNVTD SM KIA+ C  LRE+DISY + I++ SL  +G+ C N+K LKRN    L PS    + P  YL   P+  + EA  I 
Subjt:  VAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQDVDSEAAAIA

Query:  KFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNL-EIRKPNFYIPRSVFHTERYGHWR
        K+M  L+HLE+ +S L+A+ L  +C+GC NL+Y+DL GC++LT  DI   TS L NL EI KP+F  P +V    R G+ R
Subjt:  KFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNL-EIRKPNFYIPRSVFHTERYGHWR

AT5G57900.1 SKP1 interacting partner 11.9e-9859Show/hide
Query:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIRHCSDS
        + S W  L  E L NI+SRLTI++ W GPM V K W     DP L+S FDLEP F+S P ES   WSPEFE K+D MLRS V WS G L+ IR+RHCSD 
Subjt:  ESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIRHCSDS

Query:  SLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQDVDSEA
        +L + A  CPNL+VL+I+S PNVTD SM KIA  C+ L+E+DISYCHEIS+ +L +IG++CPN++ LKRN  ++   S+H G VP  YL+ACPQD D+EA
Subjt:  SLDFVAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQDVDSEA

Query:  AAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNL-EIRKPNFYIPRS--VFHTERYGHWRLYDERFQTDIFRI
         AI K M NLEHLE+ FS+LS K L+ ICEGCP L+YLDLFGCV+L+SRDI +  S L  L E++KP+ Y+PRS  V  TERYGHWRLYDERF     RI
Subjt:  AAIAKFMPNLEHLELGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNL-EIRKPNFYIPRS--VFHTERYGHWRLYDERFQTDIFRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGCCGTCGTCGGAGTCATCATCATGGGCGGAGCTAACGCACGAGTGTCTAACCAACATCCTCTCTCGGCTAACCATCGAGCAGCGGTGGCGCGGTCCTATGCT
TGTTTGCAAGCTCTGGCACCGCGCCGCCACCGACCCCTCTCTCTTCTCCCACTTCGATCTCGAACCCAGGTTCGAGTCGGTCCCCACCGAGTCCCCGGCCTGGTGGTCGC
CGGAGTTCGAGACCAAAATCGATTCAATGCTCCGATCTGCCGTCCATTGGAGCCTTGGATCTCTTTCCCTTATTCGGATCAGACACTGCTCCGATTCATCTCTCGATTTC
GTCGCTCAAGGGTGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAATGTTACTGATAGATCAATGGCTAAGATTGCTCTTGGTTGCCAAAAGCTCCGGGAAGT
AGATATCAGCTACTGTCACGAAATCTCGAACATATCATTGGCGTTAATCGGCAAGCATTGTCCAAATATCAAGACTCTAAAACGAAATTTTTTTAACTATCTAGATCCTT
CCCAACACAAGGGAATTGTCCCTGACAGTTATCTAAATGCCTGTCCTCAAGATGTGGATTCAGAAGCTGCAGCTATTGCAAAATTTATGCCTAACTTGGAGCACCTTGAA
CTCGGTTTCTCTAAACTATCTGCTAAAGCTCTAAGTTTGATCTGTGAAGGATGTCCTAACCTCAAGTACTTGGATCTGTTTGGGTGTGTGAACTTGACAAGCCGTGATAT
AGCGAATGCTACATCAAATCTGGACAATTTGGAGATTAGGAAACCGAATTTCTATATTCCGAGGTCGGTCTTTCACACGGAGAGGTATGGCCATTGGAGGTTGTATGATG
AGAGATTCCAAACTGATATTTTCAGAATTTGA
mRNA sequenceShow/hide mRNA sequence
CTTATCCTTCTCACGCCAAATAACCGAATTATGGTTTCTTGTACGGCGCGCATCTCACCATCAAAGGGAAAAGAGGAAAAAAAAAAGAAAAAACTTTTATTATTTTAGTT
TCATCCTCGACTGCCTCATCTCTTTCTGTATTCCAAAATTCCTAAGAAATGGCAGAGCCGTCGTCGGAGTCATCATCATGGGCGGAGCTAACGCACGAGTGTCTAACCAA
CATCCTCTCTCGGCTAACCATCGAGCAGCGGTGGCGCGGTCCTATGCTTGTTTGCAAGCTCTGGCACCGCGCCGCCACCGACCCCTCTCTCTTCTCCCACTTCGATCTCG
AACCCAGGTTCGAGTCGGTCCCCACCGAGTCCCCGGCCTGGTGGTCGCCGGAGTTCGAGACCAAAATCGATTCAATGCTCCGATCTGCCGTCCATTGGAGCCTTGGATCT
CTTTCCCTTATTCGGATCAGACACTGCTCCGATTCATCTCTCGATTTCGTCGCTCAAGGGTGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAATGTTACTGA
TAGATCAATGGCTAAGATTGCTCTTGGTTGCCAAAAGCTCCGGGAAGTAGATATCAGCTACTGTCACGAAATCTCGAACATATCATTGGCGTTAATCGGCAAGCATTGTC
CAAATATCAAGACTCTAAAACGAAATTTTTTTAACTATCTAGATCCTTCCCAACACAAGGGAATTGTCCCTGACAGTTATCTAAATGCCTGTCCTCAAGATGTGGATTCA
GAAGCTGCAGCTATTGCAAAATTTATGCCTAACTTGGAGCACCTTGAACTCGGTTTCTCTAAACTATCTGCTAAAGCTCTAAGTTTGATCTGTGAAGGATGTCCTAACCT
CAAGTACTTGGATCTGTTTGGGTGTGTGAACTTGACAAGCCGTGATATAGCGAATGCTACATCAAATCTGGACAATTTGGAGATTAGGAAACCGAATTTCTATATTCCGA
GGTCGGTCTTTCACACGGAGAGGTATGGCCATTGGAGGTTGTATGATGAGAGATTCCAAACTGATATTTTCAGAATTTGATGGAGGTTACAGTCAAATGCAGGGTTAATC
CTCTCCTAATACTATATGTAATCAGTGCACTTCAAAACCAAGATTAGTGTTGTTTTCCTAAGTTGTACAGTTCTTAATTTAGCTGTTCTATTTCATGAGTCACAAATCTG
TATTTTCTTCTGAACTTGTATGGTGGATTGATGTGGCACAAGGTTTGTATAACTTATAGTTAACAGCATATGCGTTTCACGTTTAGCCTTGTACATCCTCTTCATGTTAT
TGTTTTCAAGCTTGTCGGAACCATTGTTCTTTATTACTCTGAAACTCTTATTTCTCTCCATCAATATCACTAAACATCTTTGATTT
Protein sequenceShow/hide protein sequence
MAEPSSESSSWAELTHECLTNILSRLTIEQRWRGPMLVCKLWHRAATDPSLFSHFDLEPRFESVPTESPAWWSPEFETKIDSMLRSAVHWSLGSLSLIRIRHCSDSSLDF
VAQGCPNLEVLSIKSCPNVTDRSMAKIALGCQKLREVDISYCHEISNISLALIGKHCPNIKTLKRNFFNYLDPSQHKGIVPDSYLNACPQDVDSEAAAIAKFMPNLEHLE
LGFSKLSAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATSNLDNLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDIFRI