; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G006930 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G006930
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTranslation initiation factor IF-3
Genome locationchr11:7294542..7298520
RNA-Seq ExpressionLsi11G006930
SyntenyLsi11G006930
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0032790 - ribosome disassembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0043022 - ribosome binding (molecular function)
InterPro domainsIPR001288 - Translation initiation factor 3
IPR019814 - Translation initiation factor 3, N-terminal
IPR019815 - Translation initiation factor 3, C-terminal
IPR036787 - Translation initiation factor 3 (IF-3), N-terminal domain superfamily
IPR036788 - Translation initiation factor 3 (IF-3), C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144726.1 translation initiation factor IF3-4, chloroplastic [Cucumis sativus]1.4e-11076.38Show/hide
Query:  MAGLTGRFPFKPLLSQSSAATTATTSTAAA---TSSSSATPFRTSIPSLPLSSSKSNAFKFRLHKSNSLRLVISFPVSSPIRTSVFARYGGSPRSSGPAD
        MAGL+G FPFK LLSQSSAA T T+S++AA   TSSSS TPFRTS PSLP+SSS SNAFKFRLHKSNSLRL+ S PVSSPIRTSVFAR GG+PRSSGP D
Subjt:  MAGLTGRFPFKPLLSQSSAATTATTSTAAA---TSSSSATPFRTSIPSLPLSSSKSNAFKFRLHKSNSLRLVISFPVSSPIRTSVFARYGGSPRSSGPAD

Query:  SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN-----------------------
        SKRS+DE GLD+SAI+S NVRLIDA+QNMVG+VSKAQAIQMAEDAELDL          VV+SPDADPPVVRIMDYN                       
Subjt:  SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN-----------------------

Query:  -------YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP
               YNIDQHDYSVRL+AA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP
Subjt:  -------YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP

Query:  AVNEVSAGV
        AVN VSA V
Subjt:  AVNEVSAGV

XP_008452687.1 PREDICTED: translation initiation factor IF-3 [Cucumis melo]7.1e-11579.48Show/hide
Query:  MAGLTGRFPFKPLLSQSSAATTATTSTAAATSSSSATPFRTSIPSLPLSSS-KSNAFKFRLHKSNSLRLVISFPVSSPIRTSVFARYGGSPRSSGPADSK
        MAGL+G FPFK LLSQSSAA+T T+  AA TSSSS TPFRTS PSLP+SSS  SNAFK RLHKSNSLRLV SFPVSSPIRTSVFAR GG+PRSSGP DSK
Subjt:  MAGLTGRFPFKPLLSQSSAATTATTSTAAATSSSSATPFRTSIPSLPLSSS-KSNAFKFRLHKSNSLRLVISFPVSSPIRTSVFARYGGSPRSSGPADSK

Query:  RSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN-------------------------
        RS+DEFGLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDL          VVLSPDADPPVVRIMDYN                         
Subjt:  RSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN-------------------------

Query:  -----YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAV
             YNIDQHDYSVRL+AA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAV
Subjt:  -----YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAV

Query:  NEVSAGV
        NEVSAGV
Subjt:  NEVSAGV

XP_022158178.1 translation initiation factor IF3-4, chloroplastic [Momordica charantia]5.8e-10976.7Show/hide
Query:  MAGLTGRFPFKPLLSQSSAATTATTSTAAATSSSSAT---PFRTSIPSLPLSSSKSNAFKFRLHKSNSLRLVISFPVSSPIRTSVFARYGGSPRSSGPAD
        MAGLT RFPFKPLLSQSS    ATTS+AAA+SSSSA    PFRTSI  LPLSSS+SNAF FRLH SNSLRL+    VSSPIR SVFAR+GG+PRSSGPAD
Subjt:  MAGLTGRFPFKPLLSQSSAATTATTSTAAATSSSSAT---PFRTSIPSLPLSSSKSNAFKFRLHKSNSLRLVISFPVSSPIRTSVFARYGGSPRSSGPAD

Query:  SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN-----------------------
        SKRSDD+FGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDL          VVLSPDADPPVVRIMDYN                       
Subjt:  SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN-----------------------

Query:  -------YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP
               YNIDQHDYSVRL+AA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD P
Subjt:  -------YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP

Query:  AVNEVSAGV
        A+NEVSAGV
Subjt:  AVNEVSAGV

XP_022946541.1 translation initiation factor IF3-4, chloroplastic-like [Cucurbita moschata]1.7e-10072.64Show/hide
Query:  MAGLTGRFPFKPLLSQSSAATTATTSTAAATSSSSATPFRTSIPSLPLSSSKSNAFKFRLHKSNSLRLVISFPVSSPIRTSVFARYGGSPRSSGPADSKR
        MAGL+GRFPFK + SQSSA  TATT+T   +SSSSATPFRTSI  LPL SSKSNAF+FRLH SNSLRL     VSSPIRTSVFARYGG+PRSSGPA SKR
Subjt:  MAGLTGRFPFKPLLSQSSAATTATTSTAAATSSSSATPFRTSIPSLPLSSSKSNAFKFRLHKSNSLRLVISFPVSSPIRTSVFARYGGSPRSSGPADSKR

Query:  SDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN--------------------------
        S+D   LDVS+IRSNNVRLID QQNMVGIV K+QAIQMAEDAELDL          VVLSPDADPPVVRIMDY+                          
Subjt:  SDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN--------------------------

Query:  ----YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AV
            Y IDQHDYSVRLRAA+KFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AV
Subjt:  ----YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AV

Query:  NEVSAGV
        NEVSA V
Subjt:  NEVSAGV

XP_038891171.1 translation initiation factor IF3-4, chloroplastic [Benincasa hispida]1.8e-11882.08Show/hide
Query:  MAGLTGRFPFKPLLSQSSAATTATTSTAAATSSSSATPFRTSIPSLPLSSSKSNAFKFRLHKSNSLRLVISFPVSSPIRTSVFARYGGSPRSSGPADSKR
        MAGL+GRFPFKPLLSQS+ AT  TTS AAATSSSSATPFRTSI  LPLSSSK+NAFKFRL KSNSLRLV+SFPVSSPIRTSVF+RYGG+PRSSGPADSKR
Subjt:  MAGLTGRFPFKPLLSQSSAATTATTSTAAATSSSSATPFRTSIPSLPLSSSKSNAFKFRLHKSNSLRLVISFPVSSPIRTSVFARYGGSPRSSGPADSKR

Query:  SDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN--------------------------
        SDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDL          VVLSPDADPPVVRIMDYN                          
Subjt:  SDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN--------------------------

Query:  ----YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAV
            YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQE PPKKKDKPAV
Subjt:  ----YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAV

Query:  NEVSAGV
        NEVSAGV
Subjt:  NEVSAGV

TrEMBL top hitse value%identityAlignment
A0A0A0LH34 Translation initiation factor IF-36.7e-11176.38Show/hide
Query:  MAGLTGRFPFKPLLSQSSAATTATTSTAAA---TSSSSATPFRTSIPSLPLSSSKSNAFKFRLHKSNSLRLVISFPVSSPIRTSVFARYGGSPRSSGPAD
        MAGL+G FPFK LLSQSSAA T T+S++AA   TSSSS TPFRTS PSLP+SSS SNAFKFRLHKSNSLRL+ S PVSSPIRTSVFAR GG+PRSSGP D
Subjt:  MAGLTGRFPFKPLLSQSSAATTATTSTAAA---TSSSSATPFRTSIPSLPLSSSKSNAFKFRLHKSNSLRLVISFPVSSPIRTSVFARYGGSPRSSGPAD

Query:  SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN-----------------------
        SKRS+DE GLD+SAI+S NVRLIDA+QNMVG+VSKAQAIQMAEDAELDL          VV+SPDADPPVVRIMDYN                       
Subjt:  SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN-----------------------

Query:  -------YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP
               YNIDQHDYSVRL+AA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP
Subjt:  -------YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP

Query:  AVNEVSAGV
        AVN VSA V
Subjt:  AVNEVSAGV

A0A1S3BV82 Translation initiation factor IF-33.4e-11579.48Show/hide
Query:  MAGLTGRFPFKPLLSQSSAATTATTSTAAATSSSSATPFRTSIPSLPLSSS-KSNAFKFRLHKSNSLRLVISFPVSSPIRTSVFARYGGSPRSSGPADSK
        MAGL+G FPFK LLSQSSAA+T T+  AA TSSSS TPFRTS PSLP+SSS  SNAFK RLHKSNSLRLV SFPVSSPIRTSVFAR GG+PRSSGP DSK
Subjt:  MAGLTGRFPFKPLLSQSSAATTATTSTAAATSSSSATPFRTSIPSLPLSSS-KSNAFKFRLHKSNSLRLVISFPVSSPIRTSVFARYGGSPRSSGPADSK

Query:  RSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN-------------------------
        RS+DEFGLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDL          VVLSPDADPPVVRIMDYN                         
Subjt:  RSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN-------------------------

Query:  -----YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAV
             YNIDQHDYSVRL+AA+KFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAV
Subjt:  -----YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAV

Query:  NEVSAGV
        NEVSAGV
Subjt:  NEVSAGV

A0A6J1DYM5 Translation initiation factor IF-32.8e-10976.7Show/hide
Query:  MAGLTGRFPFKPLLSQSSAATTATTSTAAATSSSSAT---PFRTSIPSLPLSSSKSNAFKFRLHKSNSLRLVISFPVSSPIRTSVFARYGGSPRSSGPAD
        MAGLT RFPFKPLLSQSS    ATTS+AAA+SSSSA    PFRTSI  LPLSSS+SNAF FRLH SNSLRL+    VSSPIR SVFAR+GG+PRSSGPAD
Subjt:  MAGLTGRFPFKPLLSQSSAATTATTSTAAATSSSSAT---PFRTSIPSLPLSSSKSNAFKFRLHKSNSLRLVISFPVSSPIRTSVFARYGGSPRSSGPAD

Query:  SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN-----------------------
        SKRSDD+FGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDL          VVLSPDADPPVVRIMDYN                       
Subjt:  SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN-----------------------

Query:  -------YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP
               YNIDQHDYSVRL+AA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD P
Subjt:  -------YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP

Query:  AVNEVSAGV
        A+NEVSAGV
Subjt:  AVNEVSAGV

A0A6J1G3Y5 Translation initiation factor IF-38.2e-10172.64Show/hide
Query:  MAGLTGRFPFKPLLSQSSAATTATTSTAAATSSSSATPFRTSIPSLPLSSSKSNAFKFRLHKSNSLRLVISFPVSSPIRTSVFARYGGSPRSSGPADSKR
        MAGL+GRFPFK + SQSSA  TATT+T   +SSSSATPFRTSI  LPL SSKSNAF+FRLH SNSLRL     VSSPIRTSVFARYGG+PRSSGPA SKR
Subjt:  MAGLTGRFPFKPLLSQSSAATTATTSTAAATSSSSATPFRTSIPSLPLSSSKSNAFKFRLHKSNSLRLVISFPVSSPIRTSVFARYGGSPRSSGPADSKR

Query:  SDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN--------------------------
        S+D   LDVS+IRSNNVRLID QQNMVGIV K+QAIQMAEDAELDL          VVLSPDADPPVVRIMDY+                          
Subjt:  SDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN--------------------------

Query:  ----YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AV
            Y IDQHDYSVRLRAA+KFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AV
Subjt:  ----YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AV

Query:  NEVSAGV
        NEVSA V
Subjt:  NEVSAGV

A0A6J1KDY9 Translation initiation factor IF-31.2e-9971.99Show/hide
Query:  MAGLTGRFPFKPLLSQSSAATTATTSTAAATSSSSATPFRTSIPSLPLSSSKSNAFKFRLHKSNSLRLVISFPVSSPIRTSVFARYGGSPRSSGPADSKR
        MAGL+GRFPFK + SQSSA  TATTS     SSSSATPFRTSI  LP  SSKSNA +FRLH SNSLRL     VSSPIRTSVFARYGG+PRSSGP  SKR
Subjt:  MAGLTGRFPFKPLLSQSSAATTATTSTAAATSSSSATPFRTSIPSLPLSSSKSNAFKFRLHKSNSLRLVISFPVSSPIRTSVFARYGGSPRSSGPADSKR

Query:  SDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN--------------------------
        S+D   LDVS+IRSNNVRLID QQNMVGIV K+QAIQMAEDAELDL          VVLSPDADPPVVRIMDY+                          
Subjt:  SDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN--------------------------

Query:  ----YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AV
            Y IDQHDYSVRLRAA+KFL+DGDKVKVIVNLKGRENEFR IAIEL++RFQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AV
Subjt:  ----YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AV

Query:  NEVSAGV
        NEVSAGV
Subjt:  NEVSAGV

SwissProt top hitse value%identityAlignment
B0JKQ1 Translation initiation factor IF-37.6e-1933.15Show/hide
Query:  DSKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDY-----------------------
        D +R+  +       IR   +R+ID+  + +GI++ A+A+++AE+ ELDL          V++S  A PPV RIMDY                       
Subjt:  DSKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDY-----------------------

Query:  -----NYNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK
              Y ID+HDY+VR+  AQ+FLK GDKVK  +  +GRE +  N+A EL+ R  +++ ++A  ++A     RN+ ++L P K
Subjt:  -----NYNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK

O82234 Translation initiation factor IF3-2, chloroplastic4.1e-5752.03Show/hide
Query:  TPFRTSIPSLPLSSSKSNAFKFRLHKSN-SLRLVISFPVSSPIRTSVFARYGGSPRSSGP---ADSKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSK
        T    ++ S  L S  S     RL K+  S   +   P  +   T  F   GG  R SG       K ++ +  LD+S+IRS  VRLID QQNM+G+VSK
Subjt:  TPFRTSIPSLPLSSSKSNAFKFRLHKSN-SLRLVISFPVSSPIRTSVFARYGGSPRSSGP---ADSKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSK

Query:  AQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN----------------------------YNIDQHDYSVRLRAAQKFLKDGDKVKVIVN
         +A++MA+DAELDL          V+LSPDADPPVV++MDY+                            YNIDQHDYSVRLRAAQKFL+DGDKVKVIV+
Subjt:  AQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN----------------------------YNIDQHDYSVRLRAAQKFLKDGDKVKVIVN

Query:  LKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSA
        +KGRENEFRNIAIEL+RRFQ E+GELATEE+KNFRDRN+FI+LVPNK +++K QEPP +KK K A NE SA
Subjt:  LKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSA

Q0IDZ5 Translation initiation factor IF-32.9e-1835.87Show/hide
Query:  VRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDY----------------------------NYNIDQHDYSVRLRA
        +R++DA    +G++ + QA+++A + ELDL          V++S  ADPPV RIMDY                             Y IDQHDY VR+  
Subjt:  VRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDY----------------------------NYNIDQHDYSVRLRA

Query:  AQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRD-RNIFIVLVPNKAVLQKAQEPPKKKDKPAVNE
        AQ+FLK GDKVK  V  +GRE +   +A  L+RR  +++ E A  +    R+ RN+ + L P KA L K     K KD+  VN+
Subjt:  AQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRD-RNIFIVLVPNKAVLQKAQEPPKKKDKPAVNE

Q8R9C2 Translation initiation factor IF-32.9e-1835.5Show/hide
Query:  IRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMD---YNY-------------------------NIDQHDYS
        IR   VRLID     +GI+S  +A ++A++  LDL          V + P+A+PPV ++MD   Y Y                         NI+ HD+ 
Subjt:  IRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMD---YNY-------------------------NIDQHDYS

Query:  VRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK
        V+L++A KFLKDGDKVKV +  +GRE    ++A +L++RF EE+ E    E+A +   RN+ +V+ P K
Subjt:  VRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK

Q94B52 Translation initiation factor IF3-4, chloroplastic1.0e-6059.39Show/hide
Query:  SVFARY--GGSPRSSGPAD----SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN
        ++  RY  GG   S  P D     K S+D+  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDL          V+LSPDADPPVVR+MDY+
Subjt:  SVFARY--GGSPRSSGPAD----SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN

Query:  ----------------------------YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIV
                                    YNIDQHDYSVR+RAA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+FIV
Subjt:  ----------------------------YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIV

Query:  LVPNKAVLQKAQE-PPKKKDKPAVNEVSA
        LVPNK V++K QE PPKKK KPA ++VSA
Subjt:  LVPNKAVLQKAQE-PPKKKDKPAVNEVSA

Arabidopsis top hitse value%identityAlignment
AT2G24060.1 Translation initiation factor 3 protein2.9e-5852.03Show/hide
Query:  TPFRTSIPSLPLSSSKSNAFKFRLHKSN-SLRLVISFPVSSPIRTSVFARYGGSPRSSGP---ADSKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSK
        T    ++ S  L S  S     RL K+  S   +   P  +   T  F   GG  R SG       K ++ +  LD+S+IRS  VRLID QQNM+G+VSK
Subjt:  TPFRTSIPSLPLSSSKSNAFKFRLHKSN-SLRLVISFPVSSPIRTSVFARYGGSPRSSGP---ADSKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSK

Query:  AQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN----------------------------YNIDQHDYSVRLRAAQKFLKDGDKVKVIVN
         +A++MA+DAELDL          V+LSPDADPPVV++MDY+                            YNIDQHDYSVRLRAAQKFL+DGDKVKVIV+
Subjt:  AQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN----------------------------YNIDQHDYSVRLRAAQKFLKDGDKVKVIVN

Query:  LKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSA
        +KGRENEFRNIAIEL+RRFQ E+GELATEE+KNFRDRN+FI+LVPNK +++K QEPP +KK K A NE SA
Subjt:  LKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSA

AT4G30690.1 Translation initiation factor 3 protein7.5e-6259.39Show/hide
Query:  SVFARY--GGSPRSSGPAD----SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN
        ++  RY  GG   S  P D     K S+D+  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDL          V+LSPDADPPVVR+MDY+
Subjt:  SVFARY--GGSPRSSGPAD----SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN

Query:  ----------------------------YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIV
                                    YNIDQHDYSVR+RAA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+FIV
Subjt:  ----------------------------YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIV

Query:  LVPNKAVLQKAQE-PPKKKDKPAVNEVSA
        LVPNK V++K QE PPKKK KPA ++VSA
Subjt:  LVPNKAVLQKAQE-PPKKKDKPAVNEVSA

AT4G30690.2 Translation initiation factor 3 protein2.2e-6667.66Show/hide
Query:  SVFARY--GGSPRSSGPAD----SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN
        ++  RY  GG   S  P D     K S+D+  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDL          V+LSPDADPPVVR+MDY+
Subjt:  SVFARY--GGSPRSSGPAD----SKRSDDEFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYN

Query:  YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVS
        YNIDQHDYSVR+RAA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+FIVLVPNK V++K QE PPKKK KPA ++VS
Subjt:  YNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVS

Query:  A
        A
Subjt:  A


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGGCTCACCGGCAGATTCCCTTTCAAACCTCTCTTATCCCAATCCTCCGCCGCCACTACCGCCACCACCTCCACCGCCGCCGCAACTTCCTCCTCCTCCGCTAC
TCCCTTCCGAACCTCAATTCCTTCTCTACCCCTCTCCTCCTCTAAATCCAATGCCTTCAAATTCCGCCTTCACAAATCCAACTCTCTGCGTCTCGTCATCTCCTTTCCCG
TTTCCTCTCCAATTCGTACTTCTGTATTTGCTCGATACGGCGGCTCTCCTCGATCTTCAGGACCGGCTGATTCTAAGCGCTCTGACGATGAATTTGGTCTCGATGTTTCC
GCCATCAGGTCGAATAATGTGAGGCTTATCGACGCACAACAGAACATGGTTGGAATCGTGTCGAAGGCCCAGGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGA
TTTAGCTAAGCCTTTCTATTCCATTCAGGTTGTATTATCCCCTGATGCAGATCCTCCAGTTGTCAGAATAATGGATTACAATTATAACATCGACCAACATGATTACTCTG
TCCGTTTGAGAGCTGCACAAAAGTTTTTGAAAGATGGAGACAAGGTTAAAGTTATAGTAAACCTGAAAGGTCGTGAAAATGAGTTCAGAAACATAGCAATTGAGCTAATC
AGACGTTTCCAGGAAGAAGTTGGGGAGCTTGCAACTGAAGAGGCCAAAAACTTCAGAGACCGGAATATATTTATTGTTCTAGTTCCTAACAAGGCTGTTCTACAAAAGGC
TCAAGAACCCCCCAAGAAAAAAGATAAACCTGCAGTTAATGAAGTTTCTGCTGGTGTTTAA
mRNA sequenceShow/hide mRNA sequence
CCATTTTCTTAAAAAAATTTCGCCAAACTCCCACCCTCCACTGCCCCCTCCCACAGCTCAAAGCTATGGCTGGGCTCACCGGCAGATTCCCTTTCAAACCTCTCTTATCC
CAATCCTCCGCCGCCACTACCGCCACCACCTCCACCGCCGCCGCAACTTCCTCCTCCTCCGCTACTCCCTTCCGAACCTCAATTCCTTCTCTACCCCTCTCCTCCTCTAA
ATCCAATGCCTTCAAATTCCGCCTTCACAAATCCAACTCTCTGCGTCTCGTCATCTCCTTTCCCGTTTCCTCTCCAATTCGTACTTCTGTATTTGCTCGATACGGCGGCT
CTCCTCGATCTTCAGGACCGGCTGATTCTAAGCGCTCTGACGATGAATTTGGTCTCGATGTTTCCGCCATCAGGTCGAATAATGTGAGGCTTATCGACGCACAACAGAAC
ATGGTTGGAATCGTGTCGAAGGCCCAGGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGATTTAGCTAAGCCTTTCTATTCCATTCAGGTTGTATTATCCCCTGA
TGCAGATCCTCCAGTTGTCAGAATAATGGATTACAATTATAACATCGACCAACATGATTACTCTGTCCGTTTGAGAGCTGCACAAAAGTTTTTGAAAGATGGAGACAAGG
TTAAAGTTATAGTAAACCTGAAAGGTCGTGAAAATGAGTTCAGAAACATAGCAATTGAGCTAATCAGACGTTTCCAGGAAGAAGTTGGGGAGCTTGCAACTGAAGAGGCC
AAAAACTTCAGAGACCGGAATATATTTATTGTTCTAGTTCCTAACAAGGCTGTTCTACAAAAGGCTCAAGAACCCCCCAAGAAAAAAGATAAACCTGCAGTTAATGAAGT
TTCTGCTGGTGTTTAAGCTCAGGAAGCGTCGAGCTTTAGCCGAAAAATAGAAGGGTTAGTCGCAACAATCTAAATCTTCTTCTACCATAGAGAAATTTGAGAGATTAATG
TATAATGTTTTGTTTAATCTTATGCACCAGACTCTTGTCCATCCTATTTTTTTTAGTGGAATGTTTAGAAATTAGACGTGTTACTAATTCTTTTGAAAACATCAATTCAT
ATAAGCATCCTTAGTGGTGCATAGATTTTAGCGCCTTGGAGGATGGTGAGTCAATTTGAGAATAATTGAGGGTTGCGCTAATTTTATTGGGAACTAGATGTATTAGGGTT
TAGTAACTATCATGAGTTGACCTAATGGTTAATAAAGGGACACATGATTTTAATAAAG
Protein sequenceShow/hide protein sequence
MAGLTGRFPFKPLLSQSSAATTATTSTAAATSSSSATPFRTSIPSLPLSSSKSNAFKFRLHKSNSLRLVISFPVSSPIRTSVFARYGGSPRSSGPADSKRSDDEFGLDVS
AIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLDLAKPFYSIQVVLSPDADPPVVRIMDYNYNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIELI
RRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV