CuGenDBv2

Gene ID	Lsi11G006990
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	ATP-dependent DNA helicase
Genome location	chr11:7410869..7412204
RNA-Seq Expression	Lsi11G006990
Synteny	Lsi11G006990
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004144718.1 uncharacterized protein LOC101216574 [Cucumis sativus]

1.5e-91

92.59

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Query:  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK
        S+EASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAAN SFAN+GPEYQDILEDI QYLLNDNQSTTSDEKSLMKRVNSLCCLLQK
Subjt:  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK

Query:  DPTNSTTQNSLFN-ESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES
        DP N TTQNSLFN ES  EGPD RKNDKV +ILRGDVKAF EDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEED ES
Subjt:  DPTNSTTQNSLFN-ESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES

XP_008452508.1 PREDICTED: uncharacterized protein LOC103493516 [Cucumis melo]

4.2e-94

93.65

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Query:  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK
        S+EASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFAN+GPEYQDILEDI QYLLNDNQSTTSDEKSLMKRVNSLCCLLQK
Subjt:  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK

Query:  DPTNSTTQNSLFN-ESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES
        DPTN TTQNSLFN ES GEGPDGRKNDKV +ILRGD+KAF EDVKDNSGTKQAVGMSRKDSFGELLLHLPRI SIPKFLFNISEED ES
Subjt:  DPTNSTTQNSLFN-ESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES

XP_022158167.1 uncharacterized protein LOC111024711 isoform X1 [Momordica charantia]

1.6e-90

91.01

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Query:  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK
        S+EASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCI+EQMTAANPSFAN+GPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK
Subjt:  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK

Query:  DPTNSTTQNSLFN-ESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES
        D TN+TTQNSLFN ES GEGP+ RKNDKVS+ILRGDVKAF +DVKD+SGTKQAVGM+RKDSFGELLL LPRI SIPKFLFNISEED ES
Subjt:  DPTNSTTQNSLFN-ESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES

XP_022158168.1 uncharacterized protein LOC111024711 isoform X2 [Momordica charantia]

1.6e-90

91.01

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Query:  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK
        S+EASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCI+EQMTAANPSFAN+GPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK
Subjt:  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK

Query:  DPTNSTTQNSLFN-ESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES
        D TN+TTQNSLFN ES GEGP+ RKNDKVS+ILRGDVKAF +DVKD+SGTKQAVGM+RKDSFGELLL LPRI SIPKFLFNISEED ES
Subjt:  DPTNSTTQNSLFN-ESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES

XP_038890658.1 uncharacterized protein LOC120080162 [Benincasa hispida]

4.6e-93

93.68

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Query:  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK
        S+EASANFEVGSSRSPRNWEQ+KVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFAN+GPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK
Subjt:  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK

Query:  DPTN-STTQNSLFNE-SHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES
        DPTN +TTQNSLFN+ S GEGPDGRKNDKV + LRGDVKAFAEDVKDNSGTKQA GMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES
Subjt:  DPTN-STTQNSLFNE-SHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LM78 Uncharacterized protein

7.2e-92

92.59

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Query:  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK
        S+EASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAAN SFAN+GPEYQDILEDI QYLLNDNQSTTSDEKSLMKRVNSLCCLLQK
Subjt:  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK

Query:  DPTNSTTQNSLFN-ESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES
        DP N TTQNSLFN ES  EGPD RKNDKV +ILRGDVKAF EDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEED ES
Subjt:  DPTNSTTQNSLFN-ESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES

A0A1S3BUS8 uncharacterized protein LOC103493516

2.0e-94

93.65

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Query:  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK
        S+EASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFAN+GPEYQDILEDI QYLLNDNQSTTSDEKSLMKRVNSLCCLLQK
Subjt:  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK

Query:  DPTNSTTQNSLFN-ESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES
        DPTN TTQNSLFN ES GEGPDGRKNDKV +ILRGD+KAF EDVKDNSGTKQAVGMSRKDSFGELLLHLPRI SIPKFLFNISEED ES
Subjt:  DPTNSTTQNSLFN-ESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES

A0A6J1DVC2 uncharacterized protein LOC111024711 isoform X2

8.0e-91

91.01

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Query:  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK
        S+EASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCI+EQMTAANPSFAN+GPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK
Subjt:  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK

Query:  DPTNSTTQNSLFN-ESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES
        D TN+TTQNSLFN ES GEGP+ RKNDKVS+ILRGDVKAF +DVKD+SGTKQAVGM+RKDSFGELLL LPRI SIPKFLFNISEED ES
Subjt:  DPTNSTTQNSLFN-ESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES

A0A6J1DWI1 uncharacterized protein LOC111024711 isoform X1

8.0e-91

91.01

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Query:  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK
        S+EASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCI+EQMTAANPSFAN+GPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK
Subjt:  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK

Query:  DPTNSTTQNSLFN-ESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES
        D TN+TTQNSLFN ES GEGP+ RKNDKVS+ILRGDVKAF +DVKD+SGTKQAVGM+RKDSFGELLL LPRI SIPKFLFNISEED ES
Subjt:  DPTNSTTQNSLFN-ESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES

A0A6J1DYL5 uncharacterized protein LOC111024711 isoform X3

8.0e-91

91.01

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Query:  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK
        S+EASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCI+EQMTAANPSFAN+GPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK
Subjt:  SSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDNQSTTSDEKSLMKRVNSLCCLLQK

Query:  DPTNSTTQNSLFN-ESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES
        D TN+TTQNSLFN ES GEGP+ RKNDKVS+ILRGDVKAF +DVKD+SGTKQAVGM+RKDSFGELLL LPRI SIPKFLFNISEED ES
Subjt:  DPTNSTTQNSLFN-ESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G24100.1 unknown protein

1.4e-23

41.95

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Query:  SRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDN-QSTTSDEKSLMKRVNSLCCLLQKDPTNSTTQNSL
        SR+   W Q+K+PGLH S+SM+D +      +S+Q    N  F           E++ Q LL+DN Q+  SDEKS+M +VNS C LLQ    NS      
Subjt:  SRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDN-QSTTSDEKSLMKRVNSLCCLLQKDPTNSTTQNSL

Query:  FNESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEED
         +     G D  ++     +  G  +     V   S +K   GMSRKDSF +LL+HLPRITS+PKFLFNISEED
Subjt:  FNESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEED

AT4G30780.1 unknown protein

1.7e-24

42.78

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Query:  VGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDN-QSTTSDEKSLMKRVNSLCCLLQKDPTNSTTQ
        +  SR+  + +Q+KVPGLH SMS+SD V  +           + S     PE+ +  E + Q LL+DN Q    DEKSLM RVNSL  LL KDP  +   
Subjt:  VGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDN-QSTTSDEKSLMKRVNSLCCLLQKDPTNSTTQ

Query:  NSLFNESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES
        NS  N     G        VS     +       V D + + +  GM RKDSF +LLLHLPRITS+PKFL NISEEDG++
Subjt:  NSLFNESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

mRNA sequence

Show/hide mRNA sequence

ATGATGGGTAGCCCTGACAAAAGGAAAGCATGTCGTTTAGACTTTTTAGTTCATGAATTCTTGGTGCAAAATCGTGCCACATGTAAAATGTCCTCCGAAGCGAGTGCAAA
TTTTGAAGTTGGTAGCTCTAGAAGCCCAAGGAACTGGGAACAAATGAAAGTGCCTGGGCTCCACCCGTCAATGTCGATGAGCGATCTCGTGAACCACATTGGACACTGTA
TTTCAGAGCAGATGACAGCGGCAAATCCATCATTTGCCAATGAAGGACCAGAATACCAGGACATACTAGAGGATATTGCACAGTATCTGCTGAATGACAACCAATCTACA
ACTTCTGATGAGAAATCTCTCATGAAAAGAGTCAATTCTCTCTGTTGTCTCTTGCAGAAAGATCCAACCAATTCCACAACTCAGAACTCACTGTTCAATGAAAGTCATGG
CGAAGGACCCGATGGTAGGAAGAACGATAAAGTCAGTAGCATATTGAGGGGCGATGTCAAAGCTTTTGCAGAGGACGTAAAAGATAACTCAGGTACTAAGCAGGCAGTCG
GTATGTCTAGGAAGGATTCGTTCGGTGAACTGCTGTTGCATCTTCCTCGAATCACTTCTATCCCGAAGTTTTTGTTCAACATCTCAGAAGAAGATGGTGAAAGTTGAAGT
GTAGCTGAAATGTTTCTTCTGTACATTGCTTCAGAAATCGGCATCAGGACGGTTTAAAAGCAGATGAGAAAATCTTCATGGGATTCTGAAATATATATTGATGAAGAATC
CTCTGTATGTGTAATCCATGTATTTAGGCAATTTATGTATGTCTAGAGCTGTTTTAATTCTTTCCCCTGTAATGTTATGAGACAAGCCCACCTTACATAAGTTGTAAATG
GAATATCCTTTGGTGAATCAATCTATTAAATTAGAGTTTATACATCTTGAAACAAAATTAGCTATG

Protein sequence

Show/hide protein sequence

MMGSPDKRKACRLDFLVHEFLVQNRATCKMSSEASANFEVGSSRSPRNWEQMKVPGLHPSMSMSDLVNHIGHCISEQMTAANPSFANEGPEYQDILEDIAQYLLNDNQST
TSDEKSLMKRVNSLCCLLQKDPTNSTTQNSLFNESHGEGPDGRKNDKVSSILRGDVKAFAEDVKDNSGTKQAVGMSRKDSFGELLLHLPRITSIPKFLFNISEEDGES

Lsi11G006990 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome