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Lsi11G007050 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G007050
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-adenosyl-l-methionine decarboxylase leader peptide
Genome locationchr11:7483280..7490755
RNA-Seq ExpressionLsi11G007050
SyntenyLsi11G007050
Gene Ontology termsGO:0006557 - S-adenosylmethioninamine biosynthetic process (biological process)
GO:0006597 - spermine biosynthetic process (biological process)
GO:0008295 - spermidine biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004014 - adenosylmethionine decarboxylase activity (molecular function)
InterPro domainsIPR012511 - S-adenosyl-l-methionine decarboxylase leader peptide


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586035.1 hypothetical protein SDJN03_18768, partial [Cucurbita argyrosperma subsp. sororia]2.0e-2190.48Show/hide
Query:  RRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        RRSV+VVMEAK G KKS S SS SSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  RRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

KAG6599133.1 hypothetical protein SDJN03_08911, partial [Cucurbita argyrosperma subsp. sororia]7.3e-2491.3Show/hide
Query:  IEFDRRRSVDVVMEAKGGKKKSSSSS-SKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        I+ D RRSVDVVMEAKGGKKKSSSSS SKSSKRQQYEAPLGYIIEDVRPHGGI+KFRSAAYSNC+RKPS
Subjt:  IEFDRRRSVDVVMEAKGGKKKSSSSS-SKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

KAG7030075.1 hypothetical protein SDJN02_08422, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-2395.31Show/hide
Query:  RRSVDVVMEAKGGKKKSSSSS-SKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        RRSVDVVMEAKGGKKKSSSSS SKSSKRQQYEAPLGYIIEDVRPHGGI+KFRSAAYSNC+RKPS
Subjt:  RRSVDVVMEAKGGKKKSSSSS-SKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

TYJ96391.1 S-adenosylmethionine decarboxylase proenzyme-like [Cucumis melo var. makuwa]1.5e-2495.31Show/hide
Query:  RRRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        +RRSVDVVME KGGKKKS+SSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  RRRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

XP_038890197.1 S-adenosylmethionine decarboxylase proenzyme-like [Benincasa hispida]1.5e-2491.18Show/hide
Query:  IEFDRRRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        I+ D RRSVDVVM+ +GGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  IEFDRRRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

TrEMBL top hitse value%identityAlignment
A0A0A0LM83 Uncharacterized protein5.3e-2096.49Show/hide
Query:  MEAKGGKKKS-SSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        ME KGGKKKS SSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  MEAKGGKKKS-SSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

A0A1S3BUN9 Adenosylmethionine decarboxylase4.8e-2196.43Show/hide
Query:  MEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        ME KGGKKKS+SSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  MEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

A0A5D3BCP3 S-adenosylmethionine decarboxylase proenzyme-like7.1e-2595.31Show/hide
Query:  RRRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        +RRSVDVVME KGGKKKS+SSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
Subjt:  RRRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

A0A7J0HEL3 Uncharacterized protein9.3e-1773.13Show/hide
Query:  EFDRRRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        EF     ++ +ME+KGGKK SSSSSS SSK Q YEAPLGY IEDVRP+GGI+KFRSAAYSNC RKPS
Subjt:  EFDRRRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

A5BJ64 Reverse transcriptase Ty1/copia-type domain-containing protein1.1e-1783.87Show/hide
Query:  RSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        +SVDVVME KGGKKKSSSSSS      QYE PLGYIIEDVRP+GGIEKFRSAAYSNCVRKPS
Subjt:  RSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G02468.1 conserved peptide upstream open reading frame 96.6e-1568.42Show/hide
Query:  VMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        +ME+KGGKKKSSSSSS       YEAPLGY IEDVRP+GGI+KF+S+ YSNC ++PS
Subjt:  VMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

AT3G25572.1 conserved peptide upstream open reading frame 117.3e-1471.43Show/hide
Query:  MEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        ME KGGKKKSS+SSS+ S    +EAPL Y IEDVRP+GGI+KFRSAAYSN   KPS
Subjt:  MEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS

AT5G15948.1 conserved peptide upstream open reading frame 102.8e-1364.29Show/hide
Query:  MEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS
        ME+K G KKSSS+SS       YEAPLGY IEDVRP GGI+KF+S+ YSNC ++PS
Subjt:  MEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAATAGAATTTGATAGGAGAAGAAGCGTGGATGTTGTAATGGAGGCGAAAGGCGGTAAGAAGAAATCTAGCAGTAGTAGTAGCAAGAGTAGTAAAAGGCAACAATA
CGAAGCTCCGCTTGGATACATTATTGAAGACGTTCGTCCCCACGGTGGCATTGAGAAGTTCCGATCTGCTGCTTATTCCAACTGCGTGAGGAAGCCATCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAATAGAATTTGATAGGAGAAGAAGCGTGGATGTTGTAATGGAGGCGAAAGGCGGTAAGAAGAAATCTAGCAGTAGTAGTAGCAAGAGTAGTAAAAGGCAACAATA
CGAAGCTCCGCTTGGATACATTATTGAAGACGTTCGTCCCCACGGTGGCATTGAGAAGTTCCGATCTGCTGCTTATTCCAACTGCGTGAGGAAGCCATCCTGA
Protein sequenceShow/hide protein sequence
MVIEFDRRRSVDVVMEAKGGKKKSSSSSSKSSKRQQYEAPLGYIIEDVRPHGGIEKFRSAAYSNCVRKPS