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Lsi11G007130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G007130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCytochrome c oxidase subunit
Genome locationchr11:7614338..7616116
RNA-Seq ExpressionLsi11G007130
SyntenyLsi11G007130
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0045277 - respiratory chain complex IV (cellular component)
InterPro domainsIPR003213 - Cytochrome c oxidase, subunit VIb
IPR036549 - Cytochrome c oxidase, subunit VIb superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022929560.1 cytochrome c oxidase subunit 6b-2 [Cucurbita moschata]1.9e-2798.33Show/hide
Query:  APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
        A IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
Subjt:  APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV

XP_022969669.1 cytochrome c oxidase subunit 6b-2-like [Cucurbita maxima]1.9e-2798.33Show/hide
Query:  APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
        A IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
Subjt:  APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV

XP_022997477.1 cytochrome c oxidase subunit 6b-2 [Cucurbita maxima]1.9e-2798.33Show/hide
Query:  APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
        A IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
Subjt:  APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV

XP_038889174.1 cytochrome c oxidase subunit 6b-2 isoform X1 [Benincasa hispida]2.5e-2796.72Show/hide
Query:  SAPIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
        S  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
Subjt:  SAPIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV

XP_038889175.1 cytochrome c oxidase subunit 6b-2 isoform X2 [Benincasa hispida]1.9e-2798.33Show/hide
Query:  APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
        A IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
Subjt:  APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV

TrEMBL top hitse value%identityAlignment
A0A1S3BUT2 Cytochrome c oxidase subunit2.1e-27100Show/hide
Query:  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
        IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
Subjt:  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV

A0A6J1DIX3 Cytochrome c oxidase subunit2.7e-2796.67Show/hide
Query:  APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
        A IELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEESGECERFAKYYRALCPGEWV
Subjt:  APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV

A0A6J1EUQ5 Cytochrome c oxidase subunit9.2e-2898.33Show/hide
Query:  APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
        A IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
Subjt:  APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV

A0A6J1I3B0 Cytochrome c oxidase subunit9.2e-2898.33Show/hide
Query:  APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
        A IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
Subjt:  APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV

A0A6J1K554 Cytochrome c oxidase subunit9.2e-2898.33Show/hide
Query:  APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
        A IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
Subjt:  APIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV

SwissProt top hitse value%identityAlignment
O94581 Cytochrome c oxidase subunit 12, mitochondrial2.0e-1153.7Show/hide
Query:  TAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
        T   D RFP TNQT+HCF  YI++ RC+ AKGE+   C++F   Y++LCP EWV
Subjt:  TAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV

P14854 Cytochrome c oxidase subunit 6B12.0e-1151.72Show/hide
Query:  KTAPADFRFPTTNQTRHCFTRYIEFHRC---LTAKGEESGECERFAKYYRALCPGEWV
        KTAP D RFP  NQTR+C+  Y++FHRC   +TAKG +   CE + + Y++LCP  WV
Subjt:  KTAPADFRFPTTNQTRHCFTRYIEFHRC---LTAKGEESGECERFAKYYRALCPGEWV

Q945L0 Cytochrome c oxidase subunit 6b-22.3e-2894.83Show/hide
Query:  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
        IELKTAPADFRFPTTNQTRHCFTRYIEFHRC TAKGEES +CERFAKYYRALCPGEWV
Subjt:  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV

Q9S7L9 Cytochrome c oxidase subunit 6b-11.7e-2374.14Show/hide
Query:  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
        I+L+TAPADFRFPTTNQTRHCFTRY+E+HRC+ AKG+++ EC++FAK+YR+LCP EWV
Subjt:  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV

Q9SUD3 Cytochrome c oxidase subunit 6b-35.2e-2893.1Show/hide
Query:  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
        IELKTAPADFRFPTTNQTRHCFTRYIEFHRC TAKGE++ ECERFAKYYRALCPGEWV
Subjt:  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV

Arabidopsis top hitse value%identityAlignment
AT1G22450.1 cytochrome C oxidase 6B1.2e-2474.14Show/hide
Query:  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
        I+L+TAPADFRFPTTNQTRHCFTRY+E+HRC+ AKG+++ EC++FAK+YR+LCP EWV
Subjt:  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV

AT1G32710.1 Cytochrome c oxidase, subunit Vib family protein1.7e-1041.51Show/hide
Query:  APADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
        A  + RFP TN+TRHCF R++++H+C+   G ++ +C     Y R++CP E V
Subjt:  APADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV

AT4G28060.1 Cytochrome c oxidase, subunit Vib family protein3.7e-2993.1Show/hide
Query:  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
        IELKTAPADFRFPTTNQTRHCFTRYIEFHRC TAKGE++ ECERFAKYYRALCPGEWV
Subjt:  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV

AT5G57815.1 Cytochrome c oxidase, subunit Vib family protein1.7e-2994.83Show/hide
Query:  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV
        IELKTAPADFRFPTTNQTRHCFTRYIEFHRC TAKGEES +CERFAKYYRALCPGEWV
Subjt:  IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGTCTTCCGTTTGATCTCTTCAAGCTTCAATTTGATCAGTCATGGCTGAGAGGAAGATCCCATGCATTGAGGCAACAAGGGTTCTACCCGGGTTCTGCCCCGATTGAGCT
GAAAACAGCACCAGCTGACTTTCGATTCCCTACTACTAATCAAACCAGGCACTGTTTCACTCGCTACATTGAGTTCCACAGGTGCCTGACAGCAAAGGGTGAGGAGTCTG
GTGAATGTGAGAGATTTGCAAAGTACTATCGTGCTCTTTGCCCTGGTGAATGGGTGCATTGCCACAAAAACTCTTTTGCCTTTTTTCAATGTTATAATTTTTCGAGTTTT
GTATGCATATGCTCTAGATTAAATTCTATGTTCCAATCGTAA
mRNA sequenceShow/hide mRNA sequence
AGTCTTCCGTTTGATCTCTTCAAGCTTCAATTTGATCAGTCATGGCTGAGAGGAAGATCCCATGCATTGAGGCAACAAGGGTTCTACCCGGGTTCTGCCCCGATTGAGCT
GAAAACAGCACCAGCTGACTTTCGATTCCCTACTACTAATCAAACCAGGCACTGTTTCACTCGCTACATTGAGTTCCACAGGTGCCTGACAGCAAAGGGTGAGGAGTCTG
GTGAATGTGAGAGATTTGCAAAGTACTATCGTGCTCTTTGCCCTGGTGAATGGGTGCATTGCCACAAAAACTCTTTTGCCTTTTTTCAATGTTATAATTTTTCGAGTTTT
GTATGCATATGCTCTAGATTAAATTCTATGTTCCAATCGTAA
Protein sequenceShow/hide protein sequence
SLPFDLFKLQFDQSWLRGRSHALRQQGFYPGSAPIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLTAKGEESGECERFAKYYRALCPGEWVHCHKNSFAFFQCYNFSSF
VCICSRLNSMFQS