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Lsi11G007320 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G007320
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr11:7983282..7983710
RNA-Seq ExpressionLsi11G007320
SyntenyLsi11G007320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61102.1 hypothetical protein Csa_021323 [Cucumis sativus]4.3e-3980.17Show/hide
Query:  GGYQNYDYDSGDYSYNQSQGHEVQPTIGYYAVSAYVENNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERSTGRVGAKDEYKTTSTYRVGD
        GGYQNYDY S DYSYN  QG EVQ TIGY  V      +NQ+SSYEQSWRTHDR+RQTG+ TT+STKAVASRGETFKERSTGRVGAKDE+KTTSTYRVGD
Subjt:  GGYQNYDYDSGDYSYNQSQGHEVQPTIGYYAVSAYVENNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERSTGRVGAKDEYKTTSTYRVGD

Query:  KSGYTEYQCQERFRRV
        KSGYTEYQCQER RR+
Subjt:  KSGYTEYQCQERFRRV

TYK10872.1 uncharacterized protein E5676_scaffold231G00440 [Cucumis melo var. makuwa]3.2e-5083.1Show/hide
Query:  GGYQNYDYD-SGDYSYNQSQGHEVQPTIGYYAVSAYVENNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERSTGRVGAKDEYKTTSTYRVG
        GGYQNYDYD S DYSYN  QG EVQ TIGY  V   VE+NNQ+SSYEQSWRTHDR+RQTG+YTT STKAVASRGETFKERSTGRVGAKDE+KTTSTYRVG
Subjt:  GGYQNYDYD-SGDYSYNQSQGHEVQPTIGYYAVSAYVENNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERSTGRVGAKDEYKTTSTYRVG

Query:  DKSGYTEYQCQERFRRVDFGGKGGGSTSGSGSKG--GNKYLK
        DKSGYTEYQCQERFRRVDF    GGS+SGSGSKG  GNKYLK
Subjt:  DKSGYTEYQCQERFRRVDFGGKGGGSTSGSGSKG--GNKYLK

XP_008452151.1 PREDICTED: uncharacterized protein LOC103493252 [Cucumis melo]4.1e-5083.1Show/hide
Query:  GGYQNYDYD-SGDYSYNQSQGHEVQPTIGYYAVSAYVENNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERSTGRVGAKDEYKTTSTYRVG
        GGYQNYDYD S DYSYN  QG EVQ TIGY  V   VE+NNQ+SSYEQSWRTHDR+RQTG+YTT STKAVASRGETFKERSTGRVGAKDE+KTTSTYRVG
Subjt:  GGYQNYDYD-SGDYSYNQSQGHEVQPTIGYYAVSAYVENNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERSTGRVGAKDEYKTTSTYRVG

Query:  DKSGYTEYQCQERFRRVDFGGKGGGSTSGSGSKG--GNKYLK
        DKSGYTEYQCQERFRRVDF    GGS+SGSGSKG  GNKYLK
Subjt:  DKSGYTEYQCQERFRRVDFGGKGGGSTSGSGSKG--GNKYLK

XP_022157391.1 uncharacterized protein LOC111024099 [Momordica charantia]2.8e-3868.57Show/hide
Query:  GYQNYDYDSGDYSYN-QSQGHEVQPTIGYYAVSAYVENNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERSTGRVGAKDEYKTTSTYRVGD
        G Q+YDYDS DYSY+  SQG+E+QP  GY  V   V+ +NQ S YE+SWR HDRDRQTG Y TASTK VASRGETFKERSTGRVG KDE+KTTST RVGD
Subjt:  GYQNYDYDSGDYSYN-QSQGHEVQPTIGYYAVSAYVENNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERSTGRVGAKDEYKTTSTYRVGD

Query:  KSGYTEYQCQERFRRVDFGGKGGGSTSG-SGSKGGNKYLK
        +SGYTEYQ QE +RRVDFG  G GS  G S      KYLK
Subjt:  KSGYTEYQCQERFRRVDFGGKGGGSTSG-SGSKGGNKYLK

XP_038889670.1 uncharacterized protein LOC120079530 [Benincasa hispida]8.9e-5386.47Show/hide
Query:  DSGDYSYNQSQGHEVQPTIGYY-AVSAYVENNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERSTGRVGAKDEYKTTSTYRVGDKSGYTEY
        +SGD+SYNQSQGHEVQ TIGY   VS  VEN NQLSSYEQSWRTHDR+RQTGTYTT STKAVASRGETFKERSTGR+GAKDE+KTTSTYRVGDKSGYTEY
Subjt:  DSGDYSYNQSQGHEVQPTIGYY-AVSAYVENNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERSTGRVGAKDEYKTTSTYRVGDKSGYTEY

Query:  QCQERFRRVDFGGKGGG-STSGSGSKGGNKYLK
        QCQERFRRVDFGGKGGG   SGSGSKG N+YLK
Subjt:  QCQERFRRVDFGGKGGG-STSGSGSKGGNKYLK

TrEMBL top hitse value%identityAlignment
A0A0A0LK69 Uncharacterized protein2.1e-3980.17Show/hide
Query:  GGYQNYDYDSGDYSYNQSQGHEVQPTIGYYAVSAYVENNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERSTGRVGAKDEYKTTSTYRVGD
        GGYQNYDY S DYSYN  QG EVQ TIGY  V      +NQ+SSYEQSWRTHDR+RQTG+ TT+STKAVASRGETFKERSTGRVGAKDE+KTTSTYRVGD
Subjt:  GGYQNYDYDSGDYSYNQSQGHEVQPTIGYYAVSAYVENNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERSTGRVGAKDEYKTTSTYRVGD

Query:  KSGYTEYQCQERFRRV
        KSGYTEYQCQER RR+
Subjt:  KSGYTEYQCQERFRRV

A0A1S3BT44 uncharacterized protein LOC1034932522.0e-5083.1Show/hide
Query:  GGYQNYDYD-SGDYSYNQSQGHEVQPTIGYYAVSAYVENNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERSTGRVGAKDEYKTTSTYRVG
        GGYQNYDYD S DYSYN  QG EVQ TIGY  V   VE+NNQ+SSYEQSWRTHDR+RQTG+YTT STKAVASRGETFKERSTGRVGAKDE+KTTSTYRVG
Subjt:  GGYQNYDYD-SGDYSYNQSQGHEVQPTIGYYAVSAYVENNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERSTGRVGAKDEYKTTSTYRVG

Query:  DKSGYTEYQCQERFRRVDFGGKGGGSTSGSGSKG--GNKYLK
        DKSGYTEYQCQERFRRVDF    GGS+SGSGSKG  GNKYLK
Subjt:  DKSGYTEYQCQERFRRVDFGGKGGGSTSGSGSKG--GNKYLK

A0A5A7VGP1 Uncharacterized protein2.0e-5083.1Show/hide
Query:  GGYQNYDYD-SGDYSYNQSQGHEVQPTIGYYAVSAYVENNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERSTGRVGAKDEYKTTSTYRVG
        GGYQNYDYD S DYSYN  QG EVQ TIGY  V   VE+NNQ+SSYEQSWRTHDR+RQTG+YTT STKAVASRGETFKERSTGRVGAKDE+KTTSTYRVG
Subjt:  GGYQNYDYD-SGDYSYNQSQGHEVQPTIGYYAVSAYVENNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERSTGRVGAKDEYKTTSTYRVG

Query:  DKSGYTEYQCQERFRRVDFGGKGGGSTSGSGSKG--GNKYLK
        DKSGYTEYQCQERFRRVDF    GGS+SGSGSKG  GNKYLK
Subjt:  DKSGYTEYQCQERFRRVDFGGKGGGSTSGSGSKG--GNKYLK

A0A5D3CHW8 Uncharacterized protein1.5e-5083.1Show/hide
Query:  GGYQNYDYD-SGDYSYNQSQGHEVQPTIGYYAVSAYVENNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERSTGRVGAKDEYKTTSTYRVG
        GGYQNYDYD S DYSYN  QG EVQ TIGY  V   VE+NNQ+SSYEQSWRTHDR+RQTG+YTT STKAVASRGETFKERSTGRVGAKDE+KTTSTYRVG
Subjt:  GGYQNYDYD-SGDYSYNQSQGHEVQPTIGYYAVSAYVENNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERSTGRVGAKDEYKTTSTYRVG

Query:  DKSGYTEYQCQERFRRVDFGGKGGGSTSGSGSKG--GNKYLK
        DKSGYTEYQCQERFRRVDF    GGS+SGSGSKG  GNKYLK
Subjt:  DKSGYTEYQCQERFRRVDFGGKGGGSTSGSGSKG--GNKYLK

A0A6J1DXX9 uncharacterized protein LOC1110240991.3e-3868.57Show/hide
Query:  GYQNYDYDSGDYSYN-QSQGHEVQPTIGYYAVSAYVENNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERSTGRVGAKDEYKTTSTYRVGD
        G Q+YDYDS DYSY+  SQG+E+QP  GY  V   V+ +NQ S YE+SWR HDRDRQTG Y TASTK VASRGETFKERSTGRVG KDE+KTTST RVGD
Subjt:  GYQNYDYDSGDYSYN-QSQGHEVQPTIGYYAVSAYVENNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERSTGRVGAKDEYKTTSTYRVGD

Query:  KSGYTEYQCQERFRRVDFGGKGGGSTSG-SGSKGGNKYLK
        +SGYTEYQ QE +RRVDFG  G GS  G S      KYLK
Subjt:  KSGYTEYQCQERFRRVDFGGKGGGSTSG-SGSKGGNKYLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGGTGGTGGGTATCAGAATTATGACTACGATTCAGGCGACTATTCATACAATCAATCTCAAGGACATGAAGTTCAGCCAACAATCGGATATTATGCGGTTTCTGC
TTATGTAGAGAACAACAACCAGCTGAGCAGCTATGAACAAAGTTGGAGGACTCACGATCGTGATAGGCAAACTGGTACCTATACAACCGCCTCAACAAAGGCGGTTGCTT
CCCGTGGTGAAACGTTCAAAGAAAGATCAACTGGGAGAGTTGGCGCAAAGGACGAGTACAAAACCACCTCTACTTACAGGGTTGGAGACAAAAGTGGATATACTGAGTAT
CAGTGTCAAGAGAGGTTCCGCCGAGTTGATTTCGGCGGCAAGGGCGGTGGCAGCACCAGTGGATCCGGTAGTAAGGGGGGCAATAAATATCTCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGGTGGTGGGTATCAGAATTATGACTACGATTCAGGCGACTATTCATACAATCAATCTCAAGGACATGAAGTTCAGCCAACAATCGGATATTATGCGGTTTCTGC
TTATGTAGAGAACAACAACCAGCTGAGCAGCTATGAACAAAGTTGGAGGACTCACGATCGTGATAGGCAAACTGGTACCTATACAACCGCCTCAACAAAGGCGGTTGCTT
CCCGTGGTGAAACGTTCAAAGAAAGATCAACTGGGAGAGTTGGCGCAAAGGACGAGTACAAAACCACCTCTACTTACAGGGTTGGAGACAAAAGTGGATATACTGAGTAT
CAGTGTCAAGAGAGGTTCCGCCGAGTTGATTTCGGCGGCAAGGGCGGTGGCAGCACCAGTGGATCCGGTAGTAAGGGGGGCAATAAATATCTCAAATGA
Protein sequenceShow/hide protein sequence
MGGGGYQNYDYDSGDYSYNQSQGHEVQPTIGYYAVSAYVENNNQLSSYEQSWRTHDRDRQTGTYTTASTKAVASRGETFKERSTGRVGAKDEYKTTSTYRVGDKSGYTEY
QCQERFRRVDFGGKGGGSTSGSGSKGGNKYLK