; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G007530 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G007530
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTransmembrane protein
Genome locationchr11:8466777..8474889
RNA-Seq ExpressionLsi11G007530
SyntenyLsi11G007530
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055589.1 hypothetical protein E6C27_scaffold222G00710 [Cucumis melo var. makuwa]4.5e-10690.99Show/hide
Query:  AKSRNDAFSLLRLRAAFFLPIYGFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILVAYSIVPNTLASISSSPALRFAVLVFGV
        ++SRNDAFSLLRLRAAFFLPIY FSLFLAVSTVSSTLLSFQSKRP+LKSAL+GFKNSWTRPLVTTICIY ILVAYSIVPNTLASIS SPALRF VLVFGV
Subjt:  AKSRNDAFSLLRLRAAFFLPIYGFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILVAYSIVPNTLASISSSPALRFAVLVFGV

Query:  IFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVIL
        +FEVYLISI+SL LVVSIAEERFGFDAIR AA LMADRRLSGSILTAMFL ASS ISSEMEGLMDGVDHWMRSTAAVT+NVA+SV DKIGLISLYGMVI+
Subjt:  IFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVIL

Query:  YGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV
        +GYVVTTVFYCECRKRDFVRVENEED DHIVMV
Subjt:  YGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV

KAE8652471.1 hypothetical protein Csa_014189 [Cucumis sativus]4.3e-10489.27Show/hide
Query:  AKSRNDAFSLLRLRAAFFLPIYGFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILVAYSIVPNTLASISSSPALRFAVLVFGV
        ++SRNDAFSLLRLRAAFFLPIY FSLFLAVSTVSSTLLSF SKRP+LKS+L+GFK SWTRPLVTTICIYAILVAYSIVPNTLASIS SPA RF VLVFG+
Subjt:  AKSRNDAFSLLRLRAAFFLPIYGFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILVAYSIVPNTLASISSSPALRFAVLVFGV

Query:  IFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVIL
        +FEVYLISI SL LVVSIAEERFGFDAIR AAGLMADRRLSGSILTAMFL+ SS ISSEMEGLMDGVDHWMRSTAAVT+NVA+SV DKIGLISLYGMVI+
Subjt:  IFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVIL

Query:  YGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV
        +GYVVTTVFYCECRKRDFVRVENEED DHIVMV
Subjt:  YGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV

KAG6598865.1 hypothetical protein SDJN03_08643, partial [Cucurbita argyrosperma subsp. sororia]4.3e-9685.41Show/hide
Query:  AKSRNDAFSLLRLRAAFFLPIYGFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILVAYSIVPNTLASISSSPALRFAVLVFGV
        ++SR+DAFSLLRLRAAFFLPIY FSL  A STVS T LSF +KRPTLKS +A  KNSW RPLVTTICIYAILVAYSIVPNTLASIS SPA+RFA+LV GV
Subjt:  AKSRNDAFSLLRLRAAFFLPIYGFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILVAYSIVPNTLASISSSPALRFAVLVFGV

Query:  IFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVIL
        IFEVYLI+ILSL LVVSIAEERFGFDAIR AA LMADRRLSGSILTAMFLLASSSIS EMEGLMDGVDHWMR+TAAVTSNVAI V DK+GLISLYGMVI+
Subjt:  IFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVIL

Query:  YGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV
         GYVVTTVFYCECRK+DFVRVENEED DHIV V
Subjt:  YGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV

XP_022997441.1 uncharacterized protein LOC111492360 [Cucurbita maxima]2.5e-9685.41Show/hide
Query:  AKSRNDAFSLLRLRAAFFLPIYGFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILVAYSIVPNTLASISSSPALRFAVLVFGV
        ++SR+DAFSLLRLRAAFFLPIY FSL  A STVS T  SF +KRPTLKS +A  KNSW RPLVTTICIYAILVAYSIVPNTLASIS SPALRFA+LV GV
Subjt:  AKSRNDAFSLLRLRAAFFLPIYGFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILVAYSIVPNTLASISSSPALRFAVLVFGV

Query:  IFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVIL
        IFEVYLI++LSL LVVSIAEERFGFDAIRAAA LMADRRLSGSILTAMFLLASSSIS EMEGLMDGVDHWMR+TAAVTSNVAI V DK+GLISLYGMVI+
Subjt:  IFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVIL

Query:  YGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV
         GYVVTTVFYCECRK+DFVRVENEED DHIV V
Subjt:  YGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV

XP_038889309.1 uncharacterized protein LOC120079221 [Benincasa hispida]1.6e-10389.27Show/hide
Query:  AKSRNDAFSLLRLRAAFFLPIYGFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILVAYSIVPNTLASISSSPALRFAVLVFGV
        ++SRNDAFSLLRLRAAFF PIY  SLFLA++TVSSTLLSFQSKRP+LKSALAGFKN+WTRPLVTTICIYAILVAYS++PNTLASIS S  LRF VLVFGV
Subjt:  AKSRNDAFSLLRLRAAFFLPIYGFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILVAYSIVPNTLASISSSPALRFAVLVFGV

Query:  IFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVIL
        +FEVYLISILSLSLVVSIAE+RFGFDAIR AAGLMADR+L GSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNV I V DKIGLISLYGMVI+
Subjt:  IFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVIL

Query:  YGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV
         GYVVTTVFYCECRKRDFVRVENEEDRDHIVMV
Subjt:  YGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV

TrEMBL top hitse value%identityAlignment
A0A0A0LV14 Uncharacterized protein3.7e-6182.21Show/hide
Query:  VPNTLASISSSPA-------LRFAVLVFGVIFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHW
        +PN L S   SPA       L F VLVFG++FEVYLISI SL LVVSIAEERFGFDAIR AAGLMADRRLSGSILTAMFL+ SS ISSEMEGLMDGVDHW
Subjt:  VPNTLASISSSPA-------LRFAVLVFGVIFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHW

Query:  MRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV
        MRSTAAVT+NVA+SV DKIGLISLYGMVI++GYVVTTVFYCECRKRDFVRVENEED DHIVMV
Subjt:  MRSTAAVTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV

A0A2P5BBB7 Transmembrane protein7.2e-4952.09Show/hide
Query:  KSRNDAFSLLRLRAAFFLPIYGFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILVAYSIVPNTLASISSSPALRFAVLVFGVI
        +SR DA S+LR +A FFLP Y  SL  AV++VSS  L+   KRPTL+SA+A  K +W RPLVT+I ++A+L+AY +   TL+++  S A R  +L+ G  
Subjt:  KSRNDAFSLLRLRAAFFLPIYGFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILVAYSIVPNTLASISSSPALRFAVLVFGVI

Query:  FEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILY
         E+YL++++SL LVVSIAEERFG++AIRA +GLM  RR+SG +L+ MF+L +  I+ E+E +M+G D + R ++ V   VA  V DK+GLI LYG V+L+
Subjt:  FEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVILY

Query:  GYVVTTVFYCECRKR
        GYVVT VFYC+CR+R
Subjt:  GYVVTTVFYCECRKR

A0A5A7UQ45 Uncharacterized protein2.2e-10690.99Show/hide
Query:  AKSRNDAFSLLRLRAAFFLPIYGFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILVAYSIVPNTLASISSSPALRFAVLVFGV
        ++SRNDAFSLLRLRAAFFLPIY FSLFLAVSTVSSTLLSFQSKRP+LKSAL+GFKNSWTRPLVTTICIY ILVAYSIVPNTLASIS SPALRF VLVFGV
Subjt:  AKSRNDAFSLLRLRAAFFLPIYGFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILVAYSIVPNTLASISSSPALRFAVLVFGV

Query:  IFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVIL
        +FEVYLISI+SL LVVSIAEERFGFDAIR AA LMADRRLSGSILTAMFL ASS ISSEMEGLMDGVDHWMRSTAAVT+NVA+SV DKIGLISLYGMVI+
Subjt:  IFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVIL

Query:  YGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV
        +GYVVTTVFYCECRKRDFVRVENEED DHIVMV
Subjt:  YGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV

A0A5N6R735 Uncharacterized protein5.3e-5249.6Show/hide
Query:  KSNEKEEDKARILSGSAISAYDHRAKSRNDAFSLLRLRAAFFLPIYGFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILVAYS
        KS+  + +   +LS +   A      SR  A SLL+L+A FFLP Y  SL  AV+TV+ST  S  + RPTL +A    K +W RPL TTI IYA+ + Y+
Subjt:  KSNEKEEDKARILSGSAISAYDHRAKSRNDAFSLLRLRAAFFLPIYGFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILVAYS

Query:  IVPNTLASISSSPALRFAVLVFGVIFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAA
         VP+ LA ++ SP   F VLV G  FE+YL+++LSL LVVSI EER G+DAIR  +G+MA RRLSG +L+ +F+L S +IS +++ +MDG+D  + ST +
Subjt:  IVPNTLASISSSPALRFAVLVFGVIFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAA

Query:  VTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENE
            VA  V DK+GLI LYG+V+++ Y+VTTVFYCECRKR   R E E
Subjt:  VTSNVAISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENE

A0A6J1K518 uncharacterized protein LOC1114923601.2e-9685.41Show/hide
Query:  AKSRNDAFSLLRLRAAFFLPIYGFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILVAYSIVPNTLASISSSPALRFAVLVFGV
        ++SR+DAFSLLRLRAAFFLPIY FSL  A STVS T  SF +KRPTLKS +A  KNSW RPLVTTICIYAILVAYSIVPNTLASIS SPALRFA+LV GV
Subjt:  AKSRNDAFSLLRLRAAFFLPIYGFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILVAYSIVPNTLASISSSPALRFAVLVFGV

Query:  IFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVIL
        IFEVYLI++LSL LVVSIAEERFGFDAIRAAA LMADRRLSGSILTAMFLLASSSIS EMEGLMDGVDHWMR+TAAVTSNVAI V DK+GLISLYGMVI+
Subjt:  IFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVIL

Query:  YGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV
         GYVVTTVFYCECRK+DFVRVENEED DHIV V
Subjt:  YGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G16850.1 unknown protein4.6e-3239.35Show/hide
Query:  KSRNDAFSLLRLRAAFFLPIYGFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILVAYSIVPNTL-ASISSSPALRFAVLVFGV
        +SR DA SLL L+  +F+P +  S   +++ ++ST  S Q   P+LKS+ A  K+SW R   T+I +Y +L  YS +   L A +  +P LR+ + +  +
Subjt:  KSRNDAFSLLRLRAAFFLPIYGFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAILVAYSIVPNTL-ASISSSPALRFAVLVFGV

Query:  IFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVIL
          EVY+++I  L  VVS+ EER+GFDAI+    LM  RR++G  L  +F+  SS I   ME L   +D  + S +   S V     D   L+ +YG  ++
Subjt:  IFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVAISVADKIGLISLYGMVIL

Query:  YGYVVTTVFYCECRKR
          YVV TVFYCECRKR
Subjt:  YGYVVTTVFYCECRKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGGACAGAGAACTTCTGTGATAAAGAAAGCAGGTAAAAAATCAAATGAGAAAGAAGAAGACAAAGCAAGAATTCTAAGCGGTTCAGCAATTAGTGCCTATGACCA
CCGTGCAAAGTCCCGCAACGACGCCTTCTCCCTTCTCCGTCTTCGCGCCGCCTTCTTCCTCCCTATTTACGGCTTTTCCCTCTTTCTCGCCGTCTCTACCGTTTCCTCCA
CTCTCCTCTCCTTCCAATCCAAGCGTCCTACTCTTAAATCCGCTCTCGCTGGGTTTAAAAACTCATGGACTCGTCCTCTCGTCACCACGATTTGTATCTACGCGATTCTC
GTAGCCTACTCAATCGTTCCCAACACTCTCGCTTCGATTTCTTCATCTCCGGCTTTACGGTTCGCGGTTTTGGTGTTCGGCGTGATTTTCGAGGTGTATTTGATTTCGAT
CTTGAGTTTAAGCCTTGTTGTGTCGATTGCTGAGGAGAGATTTGGTTTTGATGCGATTCGTGCTGCGGCGGGTTTGATGGCTGATCGGAGATTGAGCGGTTCGATTCTTA
CGGCGATGTTTCTTCTTGCGTCGAGTTCGATCTCGTCGGAGATGGAAGGGCTTATGGACGGCGTTGATCATTGGATGAGGTCGACGGCAGCGGTGACGTCGAATGTGGCG
ATCAGCGTCGCGGACAAGATCGGGTTAATTTCTCTGTACGGTATGGTAATTCTTTACGGGTATGTGGTAACTACGGTTTTTTACTGCGAGTGTAGAAAGAGGGATTTTGT
TAGGGTGGAAAATGAAGAGGATCGTGATCATATCGTCATGGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAGGACAGAGAACTTCTGTGATAAAGAAAGCAGGTAAAAAATCAAATGAGAAAGAAGAAGACAAAGCAAGAATTCTAAGCGGTTCAGCAATTAGTGCCTATGACCA
CCGTGCAAAGTCCCGCAACGACGCCTTCTCCCTTCTCCGTCTTCGCGCCGCCTTCTTCCTCCCTATTTACGGCTTTTCCCTCTTTCTCGCCGTCTCTACCGTTTCCTCCA
CTCTCCTCTCCTTCCAATCCAAGCGTCCTACTCTTAAATCCGCTCTCGCTGGGTTTAAAAACTCATGGACTCGTCCTCTCGTCACCACGATTTGTATCTACGCGATTCTC
GTAGCCTACTCAATCGTTCCCAACACTCTCGCTTCGATTTCTTCATCTCCGGCTTTACGGTTCGCGGTTTTGGTGTTCGGCGTGATTTTCGAGGTGTATTTGATTTCGAT
CTTGAGTTTAAGCCTTGTTGTGTCGATTGCTGAGGAGAGATTTGGTTTTGATGCGATTCGTGCTGCGGCGGGTTTGATGGCTGATCGGAGATTGAGCGGTTCGATTCTTA
CGGCGATGTTTCTTCTTGCGTCGAGTTCGATCTCGTCGGAGATGGAAGGGCTTATGGACGGCGTTGATCATTGGATGAGGTCGACGGCAGCGGTGACGTCGAATGTGGCG
ATCAGCGTCGCGGACAAGATCGGGTTAATTTCTCTGTACGGTATGGTAATTCTTTACGGGTATGTGGTAACTACGGTTTTTTACTGCGAGTGTAGAAAGAGGGATTTTGT
TAGGGTGGAAAATGAAGAGGATCGTGATCATATCGTCATGGTTTAG
Protein sequenceShow/hide protein sequence
MQGQRTSVIKKAGKKSNEKEEDKARILSGSAISAYDHRAKSRNDAFSLLRLRAAFFLPIYGFSLFLAVSTVSSTLLSFQSKRPTLKSALAGFKNSWTRPLVTTICIYAIL
VAYSIVPNTLASISSSPALRFAVLVFGVIFEVYLISILSLSLVVSIAEERFGFDAIRAAAGLMADRRLSGSILTAMFLLASSSISSEMEGLMDGVDHWMRSTAAVTSNVA
ISVADKIGLISLYGMVILYGYVVTTVFYCECRKRDFVRVENEEDRDHIVMV