; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G007560 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G007560
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDNA repair protein XRCC3 homolog
Genome locationchr11:8491880..8497658
RNA-Seq ExpressionLsi11G007560
SyntenyLsi11G007560
Gene Ontology termsGO:0000722 - telomere maintenance via recombination (biological process)
GO:0045003 - double-strand break repair via synthesis-dependent strand annealing (biological process)
GO:0051321 - meiotic cell cycle (biological process)
GO:0071140 - resolution of mitotic recombination intermediates (biological process)
GO:0090656 - t-circle formation (biological process)
GO:0005657 - replication fork (cellular component)
GO:0033065 - Rad51C-XRCC3 complex (cellular component)
GO:0000400 - four-way junction DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008094 - DNA-dependent ATPase activity (molecular function)
InterPro domainsIPR013632 - DNA recombination and repair protein Rad51-like, C-terminal
IPR020588 - DNA recombination and repair protein RecA-like, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR033925 - Rad51/DMC1/RadA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020901.1 DNA repair protein XRCC3-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-14089.96Show/hide
Query:  MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
        MTPENLLHLLQTTQKCTFGCPIIDRSVGGGV C+SLTEIV+ESGCGKTQLCLQL  CAQLPLS GGLNA+SLYIHTEFPFPFRRLQQLSQAFSSSYPQ S
Subjt:  MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS

Query:  NPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDG
        NPS+HIFVEPVHSA QLFDIMPKIESFL NR+S LP RLIVIDSIAALFRSDF+NTPSDLKRRS+LFFKISGKLKLLAKRYSLAVVLTNQVVDLM SSDG
Subjt:  NPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDG

Query:  LNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRRTRRWLHVVFAPHLPKSSCD
        +N LRIGNLK LCSSGRRVCPALG+AWANCVN+RLFLSRNEEVVGEGDG++N  EL QRRTRRWLHVVFAPHLPKSSC+
Subjt:  LNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRRTRRWLHVVFAPHLPKSSCD

TYK01347.1 DNA repair protein XRCC3-like protein [Cucumis melo var. makuwa]1.7e-14693.93Show/hide
Query:  MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
        MTPENLLHLLQTTQKCTFGCP IDRSVGGG+ CSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLS+AFSSSYPQFS
Subjt:  MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS

Query:  NPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDG
        NPS+HIFVEPVHSAHQLFDIMPKIES LENRNS LPIRLIVIDSIAALFRSDF+NTPSDLKRRSSLFFKISGKLKLLAK+YSLAVVLTNQVVDLMGSSDG
Subjt:  NPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDG

Query:  LNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRR-TRRWLHVVFAPHLPKSSCD
        LN LRIGNLKFLCSS RRVCPALGLAWANCVN+RLFLSRNEEVVGEG+GM+NGSELVQRR TRRWLHVVFAPHLP+SSC+
Subjt:  LNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRR-TRRWLHVVFAPHLPKSSCD

XP_004150781.1 DNA repair protein XRCC3 homolog [Cucumis sativus]1.3e-14996.43Show/hide
Query:  MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
        MTPENLLHLLQTTQKCTFGCPIIDRSVGGGV CSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
Subjt:  MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS

Query:  NPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDG
        NPS+HIFVEPVHSAHQLFDIMPKIES LENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAK+YSLAVVLTNQVVDLMGSSDG
Subjt:  NPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDG

Query:  LNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQ-RRTRRWLHVVFAPHLPKSSCD
        LN LRIGNLKFLCSS RRVCPALGLAWANCVN+RLFLSRNEEVVGEG+GMMNGSELVQ RRTRRWLHVVFAPHLPKSSC+
Subjt:  LNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQ-RRTRRWLHVVFAPHLPKSSCD

XP_008451720.1 PREDICTED: DNA repair protein XRCC3 homolog [Cucumis melo]2.7e-14794.64Show/hide
Query:  MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
        MTPENLLHLLQTTQKCTFGCP IDRSVGGG+ CSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
Subjt:  MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS

Query:  NPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDG
        NPS+HIFVEPVHSAHQLFDIMPKIES LENRNS LPIRLIVIDSIAALFRSDF+NTPSDLKRRSSLFFKISGKLKLLAK+YSLAVVLTNQVVDLMGSSDG
Subjt:  NPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDG

Query:  LNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRR-TRRWLHVVFAPHLPKSSCD
        LN LRIGNLKFLCSS RRVCPALGLAWANCVN+RLFLSRNEEVVGEG+GM+NGSELVQRR TRRWLHVVFAPHLPKSSC+
Subjt:  LNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRR-TRRWLHVVFAPHLPKSSCD

XP_038890688.1 DNA repair protein XRCC3 homolog [Benincasa hispida]1.6e-14794.62Show/hide
Query:  MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
        MTPENLLHLLQTTQKCTFGCPIIDRS GGGV CSSLTEIVAESGCGKTQLCLQLSL AQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
Subjt:  MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS

Query:  NPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDG
        NPS+HIFVEPVHSAHQLFDIMPKIESFL+N NSQLPIRLIVIDSIAALFRSDF+NTPSDLKRRSSLFFKISGKLKLLAKRYSL VVLTNQVVDL+GSSDG
Subjt:  NPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDG

Query:  LNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRRTRRWLHVVFAPHLPKSSCD
        LN LRIGNLKFL SSGR+VCPALGLAWANCVNTRLFLSRNEE+VGEG+GMMNGSELVQRRTRRWLHVVFAPHLPKSSC+
Subjt:  LNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRRTRRWLHVVFAPHLPKSSCD

TrEMBL top hitse value%identityAlignment
A0A0A0LK93 RECA_2 domain-containing protein6.2e-15096.43Show/hide
Query:  MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
        MTPENLLHLLQTTQKCTFGCPIIDRSVGGGV CSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
Subjt:  MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS

Query:  NPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDG
        NPS+HIFVEPVHSAHQLFDIMPKIES LENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAK+YSLAVVLTNQVVDLMGSSDG
Subjt:  NPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDG

Query:  LNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQ-RRTRRWLHVVFAPHLPKSSCD
        LN LRIGNLKFLCSS RRVCPALGLAWANCVN+RLFLSRNEEVVGEG+GMMNGSELVQ RRTRRWLHVVFAPHLPKSSC+
Subjt:  LNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQ-RRTRRWLHVVFAPHLPKSSCD

A0A1S3BRJ5 DNA repair protein XRCC3 homolog1.3e-14794.64Show/hide
Query:  MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
        MTPENLLHLLQTTQKCTFGCP IDRSVGGG+ CSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
Subjt:  MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS

Query:  NPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDG
        NPS+HIFVEPVHSAHQLFDIMPKIES LENRNS LPIRLIVIDSIAALFRSDF+NTPSDLKRRSSLFFKISGKLKLLAK+YSLAVVLTNQVVDLMGSSDG
Subjt:  NPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDG

Query:  LNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRR-TRRWLHVVFAPHLPKSSCD
        LN LRIGNLKFLCSS RRVCPALGLAWANCVN+RLFLSRNEEVVGEG+GM+NGSELVQRR TRRWLHVVFAPHLPKSSC+
Subjt:  LNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRR-TRRWLHVVFAPHLPKSSCD

A0A5A7UPR6 DNA repair protein XRCC3-like protein1.3e-14794.64Show/hide
Query:  MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
        MTPENLLHLLQTTQKCTFGCP IDRSVGGG+ CSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
Subjt:  MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS

Query:  NPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDG
        NPS+HIFVEPVHSAHQLFDIMPKIES LENRNS LPIRLIVIDSIAALFRSDF+NTPSDLKRRSSLFFKISGKLKLLAK+YSLAVVLTNQVVDLMGSSDG
Subjt:  NPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDG

Query:  LNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRR-TRRWLHVVFAPHLPKSSCD
        LN LRIGNLKFLCSS RRVCPALGLAWANCVN+RLFLSRNEEVVGEG+GM+NGSELVQRR TRRWLHVVFAPHLPKSSC+
Subjt:  LNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRR-TRRWLHVVFAPHLPKSSCD

A0A5D3BPT7 DNA repair protein XRCC3-like protein8.4e-14793.93Show/hide
Query:  MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
        MTPENLLHLLQTTQKCTFGCP IDRSVGGG+ CSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLS+AFSSSYPQFS
Subjt:  MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS

Query:  NPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDG
        NPS+HIFVEPVHSAHQLFDIMPKIES LENRNS LPIRLIVIDSIAALFRSDF+NTPSDLKRRSSLFFKISGKLKLLAK+YSLAVVLTNQVVDLMGSSDG
Subjt:  NPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDG

Query:  LNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRR-TRRWLHVVFAPHLPKSSCD
        LN LRIGNLKFLCSS RRVCPALGLAWANCVN+RLFLSRNEEVVGEG+GM+NGSELVQRR TRRWLHVVFAPHLP+SSC+
Subjt:  LNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRR-TRRWLHVVFAPHLPKSSCD

A0A6J1FDM2 DNA repair protein XRCC3 homolog1.2e-14089.96Show/hide
Query:  MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
        MTPENLLHLLQTTQKCTFGCPIIDRSVGGGV C+SLTEIV+ESGCGKTQLCLQL  CAQLPLS GGL A+SLYIHTEFPFPFRRLQQLSQAFSSSYPQ S
Subjt:  MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS

Query:  NPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDG
        NPS+HIFVEPVHSA QLFDIMPKIESFL NR+S LP RLIVIDSIAALFRSDF+NTPSDLKRRS+LFFKISGKLKLLAKRYSLAVVLTNQVVDLM SSDG
Subjt:  NPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDG

Query:  LNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRRTRRWLHVVFAPHLPKSSCD
        +N LRIGNLK LCSSGRRVCPALG+AWANCVN+RLFLSRNEEVVGEGDG++NG EL QRRTRRWLHVVFAPHLPKSSC+
Subjt:  LNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRRTRRWLHVVFAPHLPKSSCD

SwissProt top hitse value%identityAlignment
O15315 DNA repair protein RAD51 homolog 24.1e-2634.2Show/hide
Query:  IDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSNHIFV--EPVHSAHQLF--
        +D ++ GGV C SLTEI    GCGKTQ C+ +S+ A LP + GGL  + +YI TE  F   RL ++++   S +P++ N    + +    VH   +L   
Subjt:  IDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSNHIFV--EPVHSAHQLF--

Query:  DIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFN-NTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQV-----------VDLMGSSDGLNGLRI
        +++ +IES LE       I+L+++DS+A++ R +F+     +LK R+    + +  LK LA+ +S+ V+LTNQ+            DL+  +D L     
Subjt:  DIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFN-NTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQV-----------VDLMGSSDGLNGLRI

Query:  GNLKFLCSSGRRVCPALGLAWANCVNTRLFL
         +L    S    V  ALG  W++ VNTRL L
Subjt:  GNLKFLCSSGRRVCPALGLAWANCVNTRLFL

O43542 DNA repair protein XRCC35.2e-2933.7Show/hide
Query:  QKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSNHIFVEPVHS
        Q+ + GCP++D  + GG+    +TE+   S  GKTQL LQL L  Q P  +GGL A ++YI TE  FP +RLQQL     +  P+         ++ +  
Subjt:  QKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSNHIFVEPVHS

Query:  AHQLF-DIMPKIESFLENRNSQLPI-------RLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDGLNGLR
          Q+F + +  +++ LE  N ++P+       RL+VIDS+AA FR +F++  S  + R      +   L+ L+  +   V+  NQV + M       G  
Subjt:  AHQLF-DIMPKIESFLENRNSQLPI-------RLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDGLNGLR

Query:  IGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRRTRRWLHVVFAPHLPKSSC
         G L F      RV PALG+ WAN +  RL   R  E            E       R L V+ APHLP SSC
Subjt:  IGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRRTRRWLHVVFAPHLPKSSC

Q08DH8 DNA repair protein XRCC31.8e-2932.14Show/hide
Query:  LHLL-------QTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQL---SQAFSSSY
        LHLL       +  Q+ + GCP++D  + GG+    +TE+   S  GKTQL LQL L  QLP  +GGL A ++Y+ TE  FP RRLQQL    Q   +  
Subjt:  LHLL-------QTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQL---SQAFSSSY

Query:  PQFSNPSNHIFVEPVHSAHQLF-DIMPKIESFLENRNSQLPI-------RLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLT
        P       H+ +  +   HQ+F +    +++ L+    ++P+       RL+VIDS+AA FR +F+   + L  R+     +  +L+ L+  +   V+  
Subjt:  PQFSNPSNHIFVEPVHSAHQLF-DIMPKIESFLENRNSQLPI-------RLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLT

Query:  NQVVDLMGSSDGLNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRRTRRWLHVVFAPHLPKSSC------DGYC
        NQV + +   D            L +    + PALG+ WAN +  RL   R               E       R L VVFAPHLP SSC      +G  
Subjt:  NQVVDLMGSSDGLNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRRTRRWLHVVFAPHLPKSSC------DGYC

Query:  GLDPGSKC
        G+ PG+ C
Subjt:  GLDPGSKC

Q9CXE6 DNA repair protein XRCC33.0e-3234.97Show/hide
Query:  LHLLQTT-------QKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQL---SQAFSSSY
        LHL Q         Q+ + GCP++D+ +GGG+    +T +   S  GKTQL LQL L  Q P   GGL A ++YI TE  FP +RL QL    +   +  
Subjt:  LHLLQTT-------QKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQL---SQAFSSSY

Query:  P----QFSNPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVV
        P    +    SNHIF+E       L + + K    L +R      RL+V+DSIAA FR +F+   S +  R+ L   +   L+ L+  +   V+  NQV 
Subjt:  P----QFSNPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVV

Query:  DLMGSSDGLNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRRTRRWLHVVFAPHLPKSSC
        D++     ++       + L +S  R+ PALG+ WAN +  RL + R  E     D +  G   + R   R L V+FAPHLP SSC
Subjt:  DLMGSSDGLNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRRTRRWLHVVFAPHLPKSSC

Q9FKM5 DNA repair protein XRCC3 homolog2.9e-9661.62Show/hide
Query:  PENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQF---
        PENLL    T +K T GC I+D  + GG++C SLTEIVAESGCGKTQLCLQLSLC QLP+S+GGLN SSLY+H+EFPFPFRRL QLS  F  S P     
Subjt:  PENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQF---

Query:  --SNPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGS
           NP +H+FV+ VHS   LFDIMP+I+ F+ N  ++ P++LIV+DS+AALFRS+F+NTPSDLK+RSSLFFKISGKLK LA ++ LA+V+TNQV DL+ +
Subjt:  --SNPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGS

Query:  SDGLNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEE--VVGEGDGMMNGSELVQRRTRRWLHVVFAPHLPKSSCD
        SDGL+GLRIGNL++L SSGRRV P+LGLAWANCVN+R F+SR++   V    +   N S  V R  +R L +VF+P+LP SSC+
Subjt:  SDGLNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEE--VVGEGDGMMNGSELVQRRTRRWLHVVFAPHLPKSSCD

Arabidopsis top hitse value%identityAlignment
AT2G45280.1 RAS associated with diabetes protein 51C1.0e-1928.83Show/hide
Query:  NLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSN---
        ++LH  ++  + T  C  +D  +GGG++C  +TEI    G GKTQ+ +QLS+  Q+P   GGL   ++YI TE  F   R  Q+++A      +++    
Subjt:  NLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSN---

Query:  ---PSNHIFVEPVHSAHQLF-----------DIMPKIESFL-ENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVV
            +N + ++P      +F            ++  +E F+ EN++    ++++++DSI   FR D++    DL +R+ +  +++ K   LAK++SLAVV
Subjt:  ---PSNHIFVEPVHSAHQLF-----------DIMPKIESFL-ENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVV

Query:  LTNQVVDLMGSSDGLNGLRIGN
        L NQV            L +G+
Subjt:  LTNQVVDLMGSSDGLNGLRIGN

AT2G45280.2 RAS associated with diabetes protein 51C1.0e-1928.83Show/hide
Query:  NLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSN---
        ++LH  ++  + T  C  +D  +GGG++C  +TEI    G GKTQ+ +QLS+  Q+P   GGL   ++YI TE  F   R  Q+++A      +++    
Subjt:  NLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSN---

Query:  ---PSNHIFVEPVHSAHQLF-----------DIMPKIESFL-ENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVV
            +N + ++P      +F            ++  +E F+ EN++    ++++++DSI   FR D++    DL +R+ +  +++ K   LAK++SLAVV
Subjt:  ---PSNHIFVEPVHSAHQLF-----------DIMPKIESFL-ENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVV

Query:  LTNQVVDLMGSSDGLNGLRIGN
        L NQV            L +G+
Subjt:  LTNQVVDLMGSSDGLNGLRIGN

AT3G22880.1 DNA repair (Rad51) family protein1.2e-1531.25Show/hide
Query:  MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS
        MT  + L   ++  K T GC  +D  +GGG+  S++TE   E   GKTQL   L +  QLP +  G N    YI TE  F   R+  +++ F        
Subjt:  MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFS

Query:  NPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVV
        +  N I+       HQ   ++      L  + S+ P R++++DSI ALFR DF     +L  R     ++  +L  +A+ +++AV +TNQV+
Subjt:  NPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVV

AT5G57450.1 homolog of X-ray repair cross complementing 3 (XRCC3)2.1e-9761.62Show/hide
Query:  PENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQF---
        PENLL    T +K T GC I+D  + GG++C SLTEIVAESGCGKTQLCLQLSLC QLP+S+GGLN SSLY+H+EFPFPFRRL QLS  F  S P     
Subjt:  PENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQF---

Query:  --SNPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGS
           NP +H+FV+ VHS   LFDIMP+I+ F+ N  ++ P++LIV+DS+AALFRS+F+NTPSDLK+RSSLFFKISGKLK LA ++ LA+V+TNQV DL+ +
Subjt:  --SNPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGS

Query:  SDGLNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEE--VVGEGDGMMNGSELVQRRTRRWLHVVFAPHLPKSSCD
        SDGL+GLRIGNL++L SSGRRV P+LGLAWANCVN+R F+SR++   V    +   N S  V R  +R L +VF+P+LP SSC+
Subjt:  SDGLNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEE--VVGEGDGMMNGSELVQRRTRRWLHVVFAPHLPKSSCD

AT5G57450.2 homolog of X-ray repair cross complementing 3 (XRCC3)2.1e-9761.62Show/hide
Query:  PENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQF---
        PENLL    T +K T GC I+D  + GG++C SLTEIVAESGCGKTQLCLQLSLC QLP+S+GGLN SSLY+H+EFPFPFRRL QLS  F  S P     
Subjt:  PENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQF---

Query:  --SNPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGS
           NP +H+FV+ VHS   LFDIMP+I+ F+ N  ++ P++LIV+DS+AALFRS+F+NTPSDLK+RSSLFFKISGKLK LA ++ LA+V+TNQV DL+ +
Subjt:  --SNPSNHIFVEPVHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGS

Query:  SDGLNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEE--VVGEGDGMMNGSELVQRRTRRWLHVVFAPHLPKSSCD
        SDGL+GLRIGNL++L SSGRRV P+LGLAWANCVN+R F+SR++   V    +   N S  V R  +R L +VF+P+LP SSC+
Subjt:  SDGLNGLRIGNLKFLCSSGRRVCPALGLAWANCVNTRLFLSRNEE--VVGEGDGMMNGSELVQRRTRRWLHVVFAPHLPKSSCD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCCGGAAAATCTCCTCCATCTCCTTCAAACCACCCAAAAGTGCACCTTCGGATGTCCGATCATCGACCGCTCCGTCGGCGGCGGCGTCACCTGCAGCTCCCTCAC
TGAAATCGTCGCCGAGAGCGGCTGCGGCAAAACCCAACTCTGTCTCCAGCTCTCCCTCTGCGCTCAGCTCCCTCTCTCCAATGGCGGTCTCAACGCCTCATCTCTCTACA
TCCACACCGAGTTCCCTTTCCCTTTTCGACGTCTTCAACAGCTTTCCCAAGCATTTTCCTCTTCATATCCCCAATTTTCTAATCCCTCCAATCACATCTTTGTCGAACCC
GTTCACTCTGCCCACCAACTGTTCGACATAATGCCCAAGATAGAATCCTTCCTTGAAAATCGAAATTCCCAATTGCCCATCAGGCTTATTGTGATTGATTCCATTGCAGC
GTTGTTTCGCTCTGATTTCAACAACACCCCATCTGATCTCAAGCGGAGATCTTCTCTGTTTTTCAAGATTTCTGGAAAGTTGAAGTTGTTGGCTAAGAGGTATTCTTTGG
CTGTGGTGTTGACGAATCAGGTGGTTGATTTGATGGGTTCTTCTGATGGATTGAATGGTTTGAGAATTGGGAATTTGAAGTTCTTGTGTTCGTCGGGACGACGTGTTTGC
CCGGCGCTGGGGCTCGCGTGGGCTAATTGTGTAAATACAAGATTGTTTCTGTCAAGAAATGAGGAAGTTGTTGGGGAAGGTGATGGGATGATGAATGGAAGTGAATTAGT
ACAAAGAAGAACTAGAAGATGGCTTCATGTTGTTTTTGCACCACATTTGCCTAAATCATCTTGTGATGGTTACTGTGGTCTGGATCCAGGATCAAAATGTGACATTGATT
GGTACAAGGAAGGATATATCTTTATGCAACCACTTGATGTATCGGATATAAGCTACCAGCCTTATGAAAACCTCTACCTTTATGAATACCTGTGTCTAGGGCTTCCCAAA
GCAAATTTGAAAGACCTCTTCATCCTCGACCTCAAGTATGATCTAGAAAATACGAAAAGGCCTATTCTAGATATATCAAATTCTAGGGTTAACGTAGATAGGATAGGAGA
AAGAATCTCCTTTCACAGAAGGACAAGCATGGTGGATAGGAAATTCACGTTCCTACAAAAAATGAAGCATCTTGTTCATGGAGCCTTTACATGA
mRNA sequenceShow/hide mRNA sequence
ATGACGCCGGAAAATCTCCTCCATCTCCTTCAAACCACCCAAAAGTGCACCTTCGGATGTCCGATCATCGACCGCTCCGTCGGCGGCGGCGTCACCTGCAGCTCCCTCAC
TGAAATCGTCGCCGAGAGCGGCTGCGGCAAAACCCAACTCTGTCTCCAGCTCTCCCTCTGCGCTCAGCTCCCTCTCTCCAATGGCGGTCTCAACGCCTCATCTCTCTACA
TCCACACCGAGTTCCCTTTCCCTTTTCGACGTCTTCAACAGCTTTCCCAAGCATTTTCCTCTTCATATCCCCAATTTTCTAATCCCTCCAATCACATCTTTGTCGAACCC
GTTCACTCTGCCCACCAACTGTTCGACATAATGCCCAAGATAGAATCCTTCCTTGAAAATCGAAATTCCCAATTGCCCATCAGGCTTATTGTGATTGATTCCATTGCAGC
GTTGTTTCGCTCTGATTTCAACAACACCCCATCTGATCTCAAGCGGAGATCTTCTCTGTTTTTCAAGATTTCTGGAAAGTTGAAGTTGTTGGCTAAGAGGTATTCTTTGG
CTGTGGTGTTGACGAATCAGGTGGTTGATTTGATGGGTTCTTCTGATGGATTGAATGGTTTGAGAATTGGGAATTTGAAGTTCTTGTGTTCGTCGGGACGACGTGTTTGC
CCGGCGCTGGGGCTCGCGTGGGCTAATTGTGTAAATACAAGATTGTTTCTGTCAAGAAATGAGGAAGTTGTTGGGGAAGGTGATGGGATGATGAATGGAAGTGAATTAGT
ACAAAGAAGAACTAGAAGATGGCTTCATGTTGTTTTTGCACCACATTTGCCTAAATCATCTTGTGATGGTTACTGTGGTCTGGATCCAGGATCAAAATGTGACATTGATT
GGTACAAGGAAGGATATATCTTTATGCAACCACTTGATGTATCGGATATAAGCTACCAGCCTTATGAAAACCTCTACCTTTATGAATACCTGTGTCTAGGGCTTCCCAAA
GCAAATTTGAAAGACCTCTTCATCCTCGACCTCAAGTATGATCTAGAAAATACGAAAAGGCCTATTCTAGATATATCAAATTCTAGGGTTAACGTAGATAGGATAGGAGA
AAGAATCTCCTTTCACAGAAGGACAAGCATGGTGGATAGGAAATTCACGTTCCTACAAAAAATGAAGCATCTTGTTCATGGAGCCTTTACATGA
Protein sequenceShow/hide protein sequence
MTPENLLHLLQTTQKCTFGCPIIDRSVGGGVTCSSLTEIVAESGCGKTQLCLQLSLCAQLPLSNGGLNASSLYIHTEFPFPFRRLQQLSQAFSSSYPQFSNPSNHIFVEP
VHSAHQLFDIMPKIESFLENRNSQLPIRLIVIDSIAALFRSDFNNTPSDLKRRSSLFFKISGKLKLLAKRYSLAVVLTNQVVDLMGSSDGLNGLRIGNLKFLCSSGRRVC
PALGLAWANCVNTRLFLSRNEEVVGEGDGMMNGSELVQRRTRRWLHVVFAPHLPKSSCDGYCGLDPGSKCDIDWYKEGYIFMQPLDVSDISYQPYENLYLYEYLCLGLPK
ANLKDLFILDLKYDLENTKRPILDISNSRVNVDRIGERISFHRRTSMVDRKFTFLQKMKHLVHGAFT