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Lsi11G007570 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G007570
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAuxin-responsive protein
Genome locationchr11:8511410..8513478
RNA-Seq ExpressionLsi11G007570
SyntenyLsi11G007570
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR000270 - PB1 domain
IPR003311 - AUX/IAA protein
IPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586078.1 Auxin-responsive protein IAA33, partial [Cucurbita argyrosperma subsp. sororia]2.9e-6580.84Show/hide
Query:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP-------QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD---
        MN F S T    AAAAAAAEYFKMRRWPE +LGPP       +  EEE  EDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD   
Subjt:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP-------QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD---

Query:  -GSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
         G GGGE SG+R+LDL NAVPGH+VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Subjt:  -GSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

XP_008451708.1 PREDICTED: auxin-responsive protein IAA33 [Cucumis melo]1.2e-6188.51Show/hide
Query:  TQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNA
        TQSP AAAAAAEYFKM RW ERR+GPPQQAE    EDF+AVIPPVTVVLEGRAICQRISLHKH SYESLAKALRRMFVDDDD    GE SGERRLDLTNA
Subjt:  TQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNA

Query:  VPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        VPG+IVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGR N
Subjt:  VPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

XP_022969694.1 auxin-responsive protein IAA33 [Cucurbita maxima]1.6e-6382.42Show/hide
Query:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP-----QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG----
        MN F S  TQSP AAAAAAEYFKMRRWPE +LGPP     QQ + E  EDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG    
Subjt:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP-----QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG----

Query:  SGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
         GGGE SG+R+LDL NAVPGH+VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRR RGN
Subjt:  SGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

XP_023538318.1 auxin-responsive protein IAA33 [Cucurbita pepo subsp. pepo]4.1e-6785.8Show/hide
Query:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP------QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGG
        MN F S  TQSPAAAAAAAEYFKMRRWPE +LGPP       + EEE  EDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG GG
Subjt:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP------QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGG

Query:  GENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        GE SGER+LDL NAVPGH+VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Subjt:  GENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

XP_038890972.1 auxin-responsive protein IAA33 [Benincasa hispida]2.2e-7393.63Show/hide
Query:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD-GSGGGENSG
        MNAFQSRTTQSP AAAAAAE FKMRRWPERR+GPPQQAE EG EDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDD+D G GGGENSG
Subjt:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD-GSGGGENSG

Query:  ERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        ER+LDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRI+PVKANSRRGRGN
Subjt:  ERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

TrEMBL top hitse value%identityAlignment
A0A0A0LH98 Auxin-responsive protein6.2e-6187.16Show/hide
Query:  TQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNA
        TQSP AAAAAAEYFKM RW +RR+ PPQQAE    EDFAAVIPPVTVVLEGRAICQRISLHKH SYESLAKALRRMFVDDDD    GE+SGER LDLTNA
Subjt:  TQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNA

Query:  VPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        VPG+IVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGR N
Subjt:  VPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

A0A1S3BRI6 Auxin-responsive protein5.6e-6288.51Show/hide
Query:  TQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNA
        TQSP AAAAAAEYFKM RW ERR+GPPQQAE    EDF+AVIPPVTVVLEGRAICQRISLHKH SYESLAKALRRMFVDDDD    GE SGERRLDLTNA
Subjt:  TQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNA

Query:  VPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        VPG+IVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGR N
Subjt:  VPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

A0A6J1DKE3 Auxin-responsive protein1.2e-5381.29Show/hide
Query:  AAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAY
        AAAEY K RRWPERR    +       ED +AVIP VTVVLEGRAICQRISLHKHASYESLAKALR MFV +DDG GG   SGERRLDL+NAVPGH+VAY
Subjt:  AAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAY

Query:  EDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRG
        EDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRG
Subjt:  EDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRG

A0A6J1FIF6 Auxin-responsive protein1.2e-6178.24Show/hide
Query:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP----------QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD
        MN F S  TQSP   AAAAEYFKMRRWPE +LG P          ++ EEE  EDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD
Subjt:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP----------QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDD

Query:  ----GSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
            G GGGE S +R+LDL NAVPGH+VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRRGRGN
Subjt:  ----GSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

A0A6J1I3D9 Auxin-responsive protein7.8e-6482.42Show/hide
Query:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP-----QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG----
        MN F S  TQSP AAAAAAEYFKMRRWPE +LGPP     QQ + E  EDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG    
Subjt:  MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPP-----QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDG----

Query:  SGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
         GGGE SG+R+LDL NAVPGH+VAYEDIENDLLLAGDLNWNDFVRVAKRIRILP+KANSRR RGN
Subjt:  SGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

SwissProt top hitse value%identityAlignment
A2XB18 Auxin-responsive protein IAA102.6e-0835.78Show/hide
Query:  QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFV
        Q+ +EEG E    V   V V ++G  I +++ L+ H SY++LA AL  MF     G     N+   +L L N+   + + YED + D +L GD+ W  FV
Subjt:  QQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFV

Query:  RVAKRIRIL
           KR+RI+
Subjt:  RVAKRIRIL

Q38831 Auxin-responsive protein IAA131.8e-0933.7Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G+ G  +   + L L +     ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

Q69VE0 Auxin-responsive protein IAA236.9e-0930.83Show/hide
Query:  WPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVD--DDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLL
        WP     P +      + + +A    V V ++G    +++ L  HA Y  L +AL  MF       G GGG+  G + +DL      ++  YED + D +
Subjt:  WPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVD--DDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLL

Query:  LAGDLNWNDFVRVAKRIRIL
        L GD+ W  FV   KRIR++
Subjt:  LAGDLNWNDFVRVAKRIRIL

Q6K846 Auxin-responsive protein IAA93.6e-1039.36Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRL--DLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        V V  EG AI +++ L  H+SY+ LA  L RMF  +D       + GE+++  D      G +V YED + D +L GD+ W+DF R  KR++IL
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRL--DLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

Q9FKM7 Auxin-responsive protein IAA335.6e-3554.55Show/hide
Query:  QSRTTQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVED--FAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERR
        Q R T +P     A++            G   Q     VED   ++V+PPVTVVLEGR+ICQRISL KH SY+SLA ALR+MFVD  D +          
Subjt:  QSRTTQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVED--FAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERR

Query:  LDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        LDL+NA+PGH++AYED+ENDLLLAGDL W DFVRVAKRIRILPVK N+R+ + N
Subjt:  LDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN

Arabidopsis top hitse value%identityAlignment
AT2G33310.1 auxin-induced protein 131.3e-1033.7Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G+ G  +   + L L +     ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

AT2G33310.2 auxin-induced protein 131.3e-1033.7Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G+ G  +   + L L +     ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

AT2G33310.3 auxin-induced protein 131.3e-1033.7Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL
        + V ++G AI +++ L+ H+SYE+LA+ L  MF   + G+ G  +   + L L +     ++ YED E D +L GD+ W  F+   KR+R++
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRIL

AT4G28640.3 indole-3-acetic acid inducible 111.9e-0933.96Show/hide
Query:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLD---LTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKAN
        V V ++G  I ++I L+ H  YESL+  L  MF+    GS   E  G        L +   G ++ YED E D +L GD+ W  F+   +R+RI+  K +
Subjt:  VTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLD---LTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKAN

Query:  SRRGRG
           G+G
Subjt:  SRRGRG

AT5G57420.1 indole-3-acetic acid inducible 334.0e-3654.55Show/hide
Query:  QSRTTQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVED--FAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERR
        Q R T +P     A++            G   Q     VED   ++V+PPVTVVLEGR+ICQRISL KH SY+SLA ALR+MFVD  D +          
Subjt:  QSRTTQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVED--FAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERR

Query:  LDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN
        LDL+NA+PGH++AYED+ENDLLLAGDL W DFVRVAKRIRILPVK N+R+ + N
Subjt:  LDLTNAVPGHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGCTTTCCAGTCTCGAACGACACAATCCCCTGCTGCCGCCGCCGCCGCTGCAGAGTATTTCAAGATGAGGCGGTGGCCGGAGAGGAGACTGGGTCCGCCGCAGCA
GGCGGAGGAGGAGGGGGTGGAAGATTTTGCGGCGGTGATTCCGCCAGTGACGGTGGTGCTGGAAGGGAGGGCGATCTGTCAGCGGATCAGCCTCCACAAACATGCAAGCT
ACGAGAGCCTAGCCAAGGCTCTAAGACGGATGTTCGTCGACGATGACGACGGCAGCGGCGGTGGTGAAAACTCCGGCGAACGACGGCTGGACCTGACGAACGCGGTTCCG
GGTCATATTGTTGCTTATGAAGATATTGAAAATGATCTTCTTCTTGCTGGTGATCTCAACTGGAATGATTTTGTGCGGGTGGCGAAGAGAATTCGAATACTGCCAGTAAA
AGCAAATTCAAGGAGAGGAAGAGGAAATTAA
mRNA sequenceShow/hide mRNA sequence
GGTCGTCTCTCGTATCCATATACATATCATTTTTCTTCACCAAACAAACAAACCCAATTCTCTCTCTCTTAACGCAGATGAATGCTTTCCAGTCTCGAACGACACAATCC
CCTGCTGCCGCCGCCGCCGCTGCAGAGTATTTCAAGATGAGGCGGTGGCCGGAGAGGAGACTGGGTCCGCCGCAGCAGGCGGAGGAGGAGGGGGTGGAAGATTTTGCGGC
GGTGATTCCGCCAGTGACGGTGGTGCTGGAAGGGAGGGCGATCTGTCAGCGGATCAGCCTCCACAAACATGCAAGCTACGAGAGCCTAGCCAAGGCTCTAAGACGGATGT
TCGTCGACGATGACGACGGCAGCGGCGGTGGTGAAAACTCCGGCGAACGACGGCTGGACCTGACGAACGCGGTTCCGGGTCATATTGTTGCTTATGAAGATATTGAAAAT
GATCTTCTTCTTGCTGGTGATCTCAACTGGAATGATTTTGTGCGGGTGGCGAAGAGAATTCGAATACTGCCAGTAAAAGCAAATTCAAGGAGAGGAAGAGGAAATTAAAT
TAATATATGTGTTAAATATATATTTTATGAGAGCCATTTGTATTAATTAATATTATCTTATAATTATGATTTCTTTCAAAAAAAATTTGAAAGAAATAATAAGATTTTCC
CTTTTGTTTAATGTTATTGAATGCTTCAATCTATGTTCAGTACTCTACTCAAAATATT
Protein sequenceShow/hide protein sequence
MNAFQSRTTQSPAAAAAAAEYFKMRRWPERRLGPPQQAEEEGVEDFAAVIPPVTVVLEGRAICQRISLHKHASYESLAKALRRMFVDDDDGSGGGENSGERRLDLTNAVP
GHIVAYEDIENDLLLAGDLNWNDFVRVAKRIRILPVKANSRRGRGN