; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G007640 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G007640
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionadagio protein 1
Genome locationchr11:8612074..8616637
RNA-Seq ExpressionLsi11G007640
SyntenyLsi11G007640
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009785 - blue light signaling pathway (biological process)
GO:0009908 - flower development (biological process)
GO:0010114 - response to red light (biological process)
GO:0010498 - proteasomal protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0043153 - entrainment of circadian clock by photoperiod (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0009882 - blue light photoreceptor activity (molecular function)
InterPro domainsIPR000014 - PAS domain
IPR013767 - PAS fold
IPR035965 - PAS domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055560.1 adagio protein 1 [Cucumis melo var. makuwa]7.1e-37100Show/hide
Query:  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
        MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
Subjt:  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC

TYK01358.1 adagio protein 1 [Cucumis melo var. makuwa]7.1e-37100Show/hide
Query:  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
        MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
Subjt:  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC

XP_004148329.1 adagio protein 1 [Cucumis sativus]7.1e-37100Show/hide
Query:  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
        MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
Subjt:  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC

XP_008451638.1 PREDICTED: LOW QUALITY PROTEIN: adagio protein 1 [Cucumis melo]7.1e-37100Show/hide
Query:  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
        MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
Subjt:  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC

XP_022153359.1 adagio protein 1 [Momordica charantia]2.4e-3793.98Show/hide
Query:  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNCCVLWFLG
        MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC  L + G
Subjt:  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNCCVLWFLG

TrEMBL top hitse value%identityAlignment
A0A0A0LME5 Uncharacterized protein3.4e-37100Show/hide
Query:  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
        MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
Subjt:  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC

A0A1S3BRY3 LOW QUALITY PROTEIN: adagio protein 13.4e-37100Show/hide
Query:  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
        MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
Subjt:  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC

A0A5A7UKB2 Adagio protein 13.4e-37100Show/hide
Query:  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
        MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
Subjt:  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC

A0A5D3BQS7 Adagio protein 13.4e-37100Show/hide
Query:  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
        MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
Subjt:  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC

A0A6J1DIU5 adagio protein 11.2e-3793.98Show/hide
Query:  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNCCVLWFLG
        MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC  L + G
Subjt:  MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNCCVLWFLG

SwissProt top hitse value%identityAlignment
Q5Z8K3 Adagio-like protein 19.3e-1651.58Show/hide
Query:  MEWDSNSDLSG-----------DEEEEGFL-------LNDGGPLPFPVENLFQ-TAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
        MEWDS SD +G           +EEEEG            GG   F +E + + + PCG VVTD+LEPD PIIYVN  FE  TGYRAEEVLGRNC
Subjt:  MEWDSNSDLSG-----------DEEEEGFL-------LNDGGPLPFPVENLFQ-TAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC

Q67UX0 Putative adagio-like protein 23.6e-1550.54Show/hide
Query:  MEWDSNSDLSGDEEEE-----------------GFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
        MEWDS+S+ SGDEEEE                 G  +  GG     +E +     CG VV+D+LEPD PIIYVN  FE  TGYRAEEVLGRNC
Subjt:  MEWDSNSDLSGDEEEE-----------------GFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC

Q8W420 Adagio protein 25.8e-2671.79Show/hide
Query:  MEWDSNSDLSGDEE--EEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
        MEWDS+SDLSG +E  E+G+   D G +PFPV +L  TAPCGFVV+D+LEPD+PIIYVNTVFE+VTGYRAEEV+GRNC
Subjt:  MEWDSNSDLSGDEE--EEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC

Q94BT6 Adagio protein 12.4e-2771.95Show/hide
Query:  MEWDSNSDLSGD------EEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
        MEWDS SDLS D      ++EEG L   GGP+P+PV NL  TAPCGFVVTD++EPD PIIYVNTVFEMVTGYRAEEVLG NC
Subjt:  MEWDSNSDLSGD------EEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC

Q9C9W9 Adagio protein 31.2e-1060.42Show/hide
Query:  FQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNCCVLWF
        +   P  F+V+D+LEPD P+IYVN VFE+ TGYRA+EVLGRNC  L +
Subjt:  FQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNCCVLWF

Arabidopsis top hitse value%identityAlignment
AT1G68050.1 flavin-binding, kelch repeat, f box 18.4e-1260.42Show/hide
Query:  FQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNCCVLWF
        +   P  F+V+D+LEPD P+IYVN VFE+ TGYRA+EVLGRNC  L +
Subjt:  FQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNCCVLWF

AT2G18915.1 LOV KELCH protein 21.1e-2470.67Show/hide
Query:  MEWDSNSDLSGDEE--EEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLG
        MEWDS+SDLSG +E  E+G+   D G +PFPV +L  TAPCGFVV+D+LEPD+PIIYVNTVFE+VTGYRAEEV+G
Subjt:  MEWDSNSDLSGDEE--EEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLG

AT2G18915.2 LOV KELCH protein 24.1e-2771.79Show/hide
Query:  MEWDSNSDLSGDEE--EEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
        MEWDS+SDLSG +E  E+G+   D G +PFPV +L  TAPCGFVV+D+LEPD+PIIYVNTVFE+VTGYRAEEV+GRNC
Subjt:  MEWDSNSDLSGDEE--EEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC

AT5G57360.1 Galactose oxidase/kelch repeat superfamily protein1.7e-2871.95Show/hide
Query:  MEWDSNSDLSGD------EEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
        MEWDS SDLS D      ++EEG L   GGP+P+PV NL  TAPCGFVVTD++EPD PIIYVNTVFEMVTGYRAEEVLG NC
Subjt:  MEWDSNSDLSGD------EEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC

AT5G57360.2 Galactose oxidase/kelch repeat superfamily protein1.7e-2871.95Show/hide
Query:  MEWDSNSDLSGD------EEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC
        MEWDS SDLS D      ++EEG L   GGP+P+PV NL  TAPCGFVVTD++EPD PIIYVNTVFEMVTGYRAEEVLG NC
Subjt:  MEWDSNSDLSGD------EEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTGGGACAGCAATTCGGATCTGAGCGGAGACGAGGAAGAGGAGGGCTTCTTACTCAACGATGGTGGGCCTCTTCCTTTTCCTGTTGAGAACTTATTTCAAACTGC
GCCATGTGGGTTCGTCGTCACCGATTCTCTTGAACCTGACCATCCCATCATTTATGTCAACACCGTCTTCGAAATGGTTACTGGATATCGTGCGGAGGAAGTGCTTGGTC
GCAATTGTTGTGTTTTGTGGTTTCTTGGGCGGATAGGAAGTCCTTGGCCTAGTTATTCTTTAATTGATCTTCGGTTTAAATTGGTTACTGGAAGCCGTAGTGTGTTCTCT
GGAAGGTATGATCGATATTCTACATCTTTGCATTTCATTTCTTGTGACAATTTAGCTTCGCTTATTCTTGGAATGAAGGATCAGGATTATTCTTGTAATTGCGCTTGTGC
TGCAATGTGGGGGAGCGAAGCTTCAAGAATGGAAGTATTTGGCTCAAAACACCTTTTGAAGGAGGTTATCATATGGGTTGCCAATGACAGTTCAAGTCACGTGTTCGAAT
TCATAGAGTCACCAAAGAGGATGCAATGA
mRNA sequenceShow/hide mRNA sequence
AAAGCATCCAGCGTGGGAAAATGAAAGCAGTAAGAAGGGAAAAAAATGGTGAAAGATAAGAACAACAGAACACAAATTGAGATGCCCTTTTTTCCTCAAAATCTCAAACA
ACAAGAGTTAGCGTAGACCTAAAGCTCAATGAAAGCCCGATTGAAGGAAAGCAAAGTCAAGCCAAGCCAAGTCAAGCCTCGCTCGATCCTTTCCTTTCTTAGTCCTTAGC
CACAGTAAAATCCACATTTCATAAAGGCCGTTCCTTTGCTTTAAGCCTTAACCACCCAGTTTCTCTTCATCCCTCAGATTTTTCTTCCATCAGAGGGCGGTGAGCGAACA
CGAAAGGCAAAAAAACCAAGTTTTTATTAACCCCGTCAAACCCAAAATCACTATCTTCTTCTATCTATACCAGAGCTAAGCTTTTAGCTAAATTGTCGAACCCTTTCAAC
CACTCGTTATCTTTTTCCCTCTGTGAACCGTCTCAACCTTCTTCAATTTCGGTTATCGAGTGTTCCCACCGTCTTAATTGGTCGTTTTTGAGCTAAAACCCTGTTTTTTG
GGCTCCGATCGCCGGAATTTTTTCTGGGTTTCTTCCTAATTGGATATCTGTAAATGGGTTGAAGATAATATTTGGGTTTTGGAAGAAAGGAAAATGGAGTGGGACAGCAA
TTCGGATCTGAGCGGAGACGAGGAAGAGGAGGGCTTCTTACTCAACGATGGTGGGCCTCTTCCTTTTCCTGTTGAGAACTTATTTCAAACTGCGCCATGTGGGTTCGTCG
TCACCGATTCTCTTGAACCTGACCATCCCATCATTTATGTCAACACCGTCTTCGAAATGGTTACTGGATATCGTGCGGAGGAAGTGCTTGGTCGCAATTGTTGTGTTTTG
TGGTTTCTTGGGCGGATAGGAAGTCCTTGGCCTAGTTATTCTTTAATTGATCTTCGGTTTAAATTGGTTACTGGAAGCCGTAGTGTGTTCTCTGGAAGGTATGATCGATA
TTCTACATCTTTGCATTTCATTTCTTGTGACAATTTAGCTTCGCTTATTCTTGGAATGAAGGATCAGGATTATTCTTGTAATTGCGCTTGTGCTGCAATGTGGGGGAGCG
AAGCTTCAAGAATGGAAGTATTTGGCTCAAAACACCTTTTGAAGGAGGTTATCATATGGGTTGCCAATGACAGTTCAAGTCACGTGTTCGAATTCATAGAGTCACCAAAG
AGGATGCAATGA
Protein sequenceShow/hide protein sequence
MEWDSNSDLSGDEEEEGFLLNDGGPLPFPVENLFQTAPCGFVVTDSLEPDHPIIYVNTVFEMVTGYRAEEVLGRNCCVLWFLGRIGSPWPSYSLIDLRFKLVTGSRSVFS
GRYDRYSTSLHFISCDNLASLILGMKDQDYSCNCACAAMWGSEASRMEVFGSKHLLKEVIIWVANDSSSHVFEFIESPKRMQ