; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G007660 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G007660
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr11:8620491..8627961
RNA-Seq ExpressionLsi11G007660
SyntenyLsi11G007660
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK01375.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]1.4e-4438.44Show/hide
Query:  HLLQLSLSPNESAHNLKPVNVAKRNVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQFD----------------------------------------
        HLL LSLSPN+SAH LKPVNVAK+NV HLPSLQIS DST+KRRDGA LKK +LNSAPQF+                                        
Subjt:  HLLQLSLSPNESAHNLKPVNVAKRNVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQFD----------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLTMLLFGKVG
                      LVTYNVML VYGK+GRSWDKIL L DE R+EGLQFDE TC+T+ SA                    GYEPG    +  + +FGK G
Subjt:  --------------LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLTMLLFGKVG

Query:  IYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT
        IYSEALNILK++EDNN TP+SVTYNELVAAYVR  FYEEGA VIDT
Subjt:  IYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT

XP_004148341.1 pentatricopeptide repeat-containing protein At2g18940, chloroplastic [Cucumis sativus]6.9e-4438.44Show/hide
Query:  HLLQLSLSPNESAHNLKPVNVAKRNVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQFD----------------------------------------
        HLL LSLSPN+SAH LKPVNVAK+NV HLPSLQIS DST+KRRDGAQLKK +LNSAPQF+                                        
Subjt:  HLLQLSLSPNESAHNLKPVNVAKRNVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQFD----------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLTMLLFGKVG
                      LVTYNVML VYGK+GRSWDKIL L DE R+EGLQFDE TC+T+ SA                    GYEPG    +  + +FGK G
Subjt:  --------------LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLTMLLFGKVG

Query:  IYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT
        IYSEALNILK++EDNN T +SVTYNELVAAYVR  FYEEGA VIDT
Subjt:  IYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT

XP_008451598.1 PREDICTED: pentatricopeptide repeat-containing protein At2g18940, chloroplastic [Cucumis melo]2.8e-4538.73Show/hide
Query:  HLLQLSLSPNESAHNLKPVNVAKRNVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQFD----------------------------------------
        HLL LSLSPN+SAH LKPVNVAK+NV HLPSLQIS DST+KRRDGAQLKK +LNSAPQF+                                        
Subjt:  HLLQLSLSPNESAHNLKPVNVAKRNVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQFD----------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLTMLLFGKVG
                      LVTYNVML VYGK+GRSWDKIL L DE R+EGLQFDE TC+T+ SA                    GYEPG    +  + +FGK G
Subjt:  --------------LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLTMLLFGKVG

Query:  IYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT
        IYSEALNILK++EDNN TP+SVTYNELVAAYVR  FYEEGA VIDT
Subjt:  IYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT

XP_022997385.1 pentatricopeptide repeat-containing protein At2g18940, chloroplastic-like isoform X2 [Cucurbita maxima]5.4e-4136.99Show/hide
Query:  HLLQLSLSPNESAHNLKPVNVAKRNVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQ------------------------------------------
        HLLQLSL PN++ H LKPVNVA++NV HLPSLQIS DST+KR  G QLKK +LNSAP+                                          
Subjt:  HLLQLSLSPNESAHNLKPVNVAKRNVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQ------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --FD----------LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLTMLLFGKVG
          FD          LVTYNVML VYGK+GRSWDKILGL DE RSEGLQFDE TC+T+ SA                    GYEPG    +  + +FGK G
Subjt:  --FD----------LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLTMLLFGKVG

Query:  IYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT
        +YSEALNILK++EDNN TP+S+TYNELVAAYVR  FYEEGA VIDT
Subjt:  IYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT

XP_038890555.1 pentatricopeptide repeat-containing protein At2g18940, chloroplastic [Benincasa hispida]2.6e-4337.57Show/hide
Query:  HLLQLSLSPNESAHNLKPVNVAKRNVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQFD----------------------------------------
        HLLQLSLSPN++AH LKPVNVA++NV H PSLQIS DST+ RR+GAQLKK ILNSAPQF+                                        
Subjt:  HLLQLSLSPNESAHNLKPVNVAKRNVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQFD----------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLTMLLFGKVG
                      LVTYNVML VYGK+GRSWDKILGL D+ +SEGLQFDE TC+T+ SA                    GYEPG    +  + +FGK G
Subjt:  --------------LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLTMLLFGKVG

Query:  IYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT
        IYSEALNILK++EDNN  P+SVTYNELVAAYVR  FYEEGA VIDT
Subjt:  IYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT

TrEMBL top hitse value%identityAlignment
A0A0A0LMF0 Uncharacterized protein3.3e-4438.44Show/hide
Query:  HLLQLSLSPNESAHNLKPVNVAKRNVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQFD----------------------------------------
        HLL LSLSPN+SAH LKPVNVAK+NV HLPSLQIS DST+KRRDGAQLKK +LNSAPQF+                                        
Subjt:  HLLQLSLSPNESAHNLKPVNVAKRNVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQFD----------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLTMLLFGKVG
                      LVTYNVML VYGK+GRSWDKIL L DE R+EGLQFDE TC+T+ SA                    GYEPG    +  + +FGK G
Subjt:  --------------LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLTMLLFGKVG

Query:  IYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT
        IYSEALNILK++EDNN T +SVTYNELVAAYVR  FYEEGA VIDT
Subjt:  IYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT

A0A1S3BR96 pentatricopeptide repeat-containing protein At2g18940, chloroplastic1.4e-4538.73Show/hide
Query:  HLLQLSLSPNESAHNLKPVNVAKRNVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQFD----------------------------------------
        HLL LSLSPN+SAH LKPVNVAK+NV HLPSLQIS DST+KRRDGAQLKK +LNSAPQF+                                        
Subjt:  HLLQLSLSPNESAHNLKPVNVAKRNVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQFD----------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLTMLLFGKVG
                      LVTYNVML VYGK+GRSWDKIL L DE R+EGLQFDE TC+T+ SA                    GYEPG    +  + +FGK G
Subjt:  --------------LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLTMLLFGKVG

Query:  IYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT
        IYSEALNILK++EDNN TP+SVTYNELVAAYVR  FYEEGA VIDT
Subjt:  IYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT

A0A5A7UPS9 Pentatricopeptide repeat-containing protein1.4e-4538.73Show/hide
Query:  HLLQLSLSPNESAHNLKPVNVAKRNVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQFD----------------------------------------
        HLL LSLSPN+SAH LKPVNVAK+NV HLPSLQIS DST+KRRDGAQLKK +LNSAPQF+                                        
Subjt:  HLLQLSLSPNESAHNLKPVNVAKRNVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQFD----------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLTMLLFGKVG
                      LVTYNVML VYGK+GRSWDKIL L DE R+EGLQFDE TC+T+ SA                    GYEPG    +  + +FGK G
Subjt:  --------------LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLTMLLFGKVG

Query:  IYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT
        IYSEALNILK++EDNN TP+SVTYNELVAAYVR  FYEEGA VIDT
Subjt:  IYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT

A0A5D3BQB6 Pentatricopeptide repeat-containing protein6.7e-4538.44Show/hide
Query:  HLLQLSLSPNESAHNLKPVNVAKRNVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQFD----------------------------------------
        HLL LSLSPN+SAH LKPVNVAK+NV HLPSLQIS DST+KRRDGA LKK +LNSAPQF+                                        
Subjt:  HLLQLSLSPNESAHNLKPVNVAKRNVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQFD----------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------------LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLTMLLFGKVG
                      LVTYNVML VYGK+GRSWDKIL L DE R+EGLQFDE TC+T+ SA                    GYEPG    +  + +FGK G
Subjt:  --------------LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLTMLLFGKVG

Query:  IYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT
        IYSEALNILK++EDNN TP+SVTYNELVAAYVR  FYEEGA VIDT
Subjt:  IYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT

A0A6J1KB83 pentatricopeptide repeat-containing protein At2g18940, chloroplastic-like isoform X12.6e-4136.99Show/hide
Query:  HLLQLSLSPNESAHNLKPVNVAKRNVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQ------------------------------------------
        HLLQLSL PN++ H LKPVNVA++NV HLPSLQIS DST+KR  G QLKK +LNSAP+                                          
Subjt:  HLLQLSLSPNESAHNLKPVNVAKRNVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQ------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --FD----------LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLTMLLFGKVG
          FD          LVTYNVML VYGK+GRSWDKILGL DE RSEGLQFDE TC+T+ SA                    GYEPG    +  + +FGK G
Subjt:  --FD----------LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLTMLLFGKVG

Query:  IYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT
        +YSEALNILK++EDNN TP+S+TYNELVAAYVR  FYEEGA VIDT
Subjt:  IYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT

SwissProt top hitse value%identityAlignment
B8Y6I0 Pentatricopeptide repeat-containing protein 10, chloroplastic2.7e-1939.39Show/hide
Query:  LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPGI---SLTMLLFGKVGIYSEALNILKKIED
        LVTYNV+L VYG++GRSW +I+ L DE R+ G++ D  T +T+ +A                    G+ P +   +  + +FGK G Y+EAL +L ++E 
Subjt:  LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPGI---SLTMLLFGKVGIYSEALNILKKIED

Query:  NNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT
        N   P++VTYNEL   Y R  F+EE A  +DT
Subjt:  NNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT

O64624 Pentatricopeptide repeat-containing protein At2g18940, chloroplastic1.4e-2846.41Show/hide
Query:  TQKRRDGAQLKKSILNSAPQFDLVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLT
        T K      L + +    P   LVTYNV+L V+GK+GRSW KILG+ DE RS+GL+FDE TC+T+ SA                    GYEPG    +  
Subjt:  TQKRRDGAQLKKSILNSAPQFDLVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLT

Query:  MLLFGKVGIYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVID
        + +FGK G+Y+EAL++LK++E+N+   +SVTYNELVAAYVR  F +E A VI+
Subjt:  MLLFGKVGIYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVID

Q9LYZ9 Pentatricopeptide repeat-containing protein At5g028603.6e-1128.57Show/hide
Query:  NVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQFDLVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNT--------------------MT
        +V    SL  +  ++ + R+   + K +     +  L+TYNV+L+V+GK+G  W+KI  L ++ +S+G+  D  T NT                    M 
Subjt:  NVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQFDLVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNT--------------------MT

Query:  SAGYE-PGISLTMLL--FGKVGIYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEE
        +AG+    ++   LL  +GK     EA+ +L ++  N ++P+ VTYN L++AY R    +E
Subjt:  SAGYE-PGISLTMLL--FGKVGIYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEE

Q9S7Q2 Pentatricopeptide repeat-containing protein At1g74850, chloroplastic2.0e-0630.39Show/hide
Query:  LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSAGYEPGISLTMLLFGKVGIYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFY
        ++TYN +++   + G  W+ +LGLF E R EG+Q D  T NT+ SA    G+              EA  + + + D    P+  TY+ LV  + + R  
Subjt:  LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSAGYEPGISLTMLLFGKVGIYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFY

Query:  EE
        E+
Subjt:  EE

Q9SIC9 Pentatricopeptide repeat-containing protein At2g31400, chloroplastic2.0e-0629.13Show/hide
Query:  DLVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSAGYEPGISLTMLLFGKVGIYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRF
        D V+YN +L +Y K+GRS ++ L +  E  S G++ D  T N +               +GK G Y E   +  +++  +  PN +TY+ L+  Y +   
Subjt:  DLVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSAGYEPGISLTMLLFGKVGIYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRF

Query:  YEE
        Y+E
Subjt:  YEE

Arabidopsis top hitse value%identityAlignment
AT1G74850.1 plastid transcriptionally active 21.4e-0730.39Show/hide
Query:  LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSAGYEPGISLTMLLFGKVGIYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFY
        ++TYN +++   + G  W+ +LGLF E R EG+Q D  T NT+ SA    G+              EA  + + + D    P+  TY+ LV  + + R  
Subjt:  LVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSAGYEPGISLTMLLFGKVGIYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFY

Query:  EE
        E+
Subjt:  EE

AT2G18940.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.0e-2946.41Show/hide
Query:  TQKRRDGAQLKKSILNSAPQFDLVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLT
        T K      L + +    P   LVTYNV+L V+GK+GRSW KILG+ DE RS+GL+FDE TC+T+ SA                    GYEPG    +  
Subjt:  TQKRRDGAQLKKSILNSAPQFDLVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSA--------------------GYEPG---ISLT

Query:  MLLFGKVGIYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVID
        + +FGK G+Y+EAL++LK++E+N+   +SVTYNELVAAYVR  F +E A VI+
Subjt:  MLLFGKVGIYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVID

AT2G31400.1 genomes uncoupled 11.4e-0729.13Show/hide
Query:  DLVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSAGYEPGISLTMLLFGKVGIYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRF
        D V+YN +L +Y K+GRS ++ L +  E  S G++ D  T N +               +GK G Y E   +  +++  +  PN +TY+ L+  Y +   
Subjt:  DLVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSAGYEPGISLTMLLFGKVGIYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRF

Query:  YEE
        Y+E
Subjt:  YEE

AT5G02860.1 Pentatricopeptide repeat (PPR) superfamily protein2.5e-1228.57Show/hide
Query:  NVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQFDLVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNT--------------------MT
        +V    SL  +  ++ + R+   + K +     +  L+TYNV+L+V+GK+G  W+KI  L ++ +S+G+  D  T NT                    M 
Subjt:  NVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQFDLVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNT--------------------MT

Query:  SAGYE-PGISLTMLL--FGKVGIYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEE
        +AG+    ++   LL  +GK     EA+ +L ++  N ++P+ VTYN L++AY R    +E
Subjt:  SAGYE-PGISLTMLL--FGKVGIYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEE

AT5G15010.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.2e-0829.92Show/hide
Query:  RDGAQLKKSILNSAPQFDLVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSAGYEPGISLTMLLFGKVGIYSEALNILKKI-EDNNYT
        R+  ++   + N   + D+V+Y+ M+  Y K G S +K+L LFD  + E ++ D    N +  A              K    SEA N++K + E+    
Subjt:  RDGAQLKKSILNSAPQFDLVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSAGYEPGISLTMLLFGKVGIYSEALNILKKI-EDNNYT

Query:  PNSVTYNELVAAYVRPRFYEEGAVVID
        PN VTYN L+    + R  EE   V D
Subjt:  PNSVTYNELVAAYVRPRFYEEGAVVID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATCTTCTTCAATTGTCTCTGTCTCCCAATGAAAGTGCCCATAATCTCAAACCTGTAAATGTTGCGAAAAGGAATGTTGTCCATTTGCCTTCTCTTCAAATTTCAACGGA
TTCAACTCAGAAACGGAGAGATGGGGCTCAGTTAAAGAAATCTATCTTGAATTCAGCTCCGCAATTTGATTTGGTTACTTACAATGTTATGCTTCATGTTTATGGGAAAA
TAGGTCGCTCTTGGGATAAAATTTTAGGCTTATTCGATGAAACGAGGAGTGAAGGTTTGCAATTTGATGAGTCTACCTGCAATACTATGACATCTGCTGGTTATGAGCCA
GGAATATCTCTTACAATGCTTTTGTTTGGAAAAGTTGGGATTTACTCAGAGGCCTTAAACATCTTGAAAAAAATTGAGGACAATAATTACACCCCGAACTCTGTTACTTA
CAATGAGCTTGTAGCAGCTTATGTTCGGCCAAGATTCTACGAGGAAGGAGCTGTTGTAATTGACACATGA
mRNA sequenceShow/hide mRNA sequence
CATCTTCTTCAATTGTCTCTGTCTCCCAATGAAAGTGCCCATAATCTCAAACCTGTAAATGTTGCGAAAAGGAATGTTGTCCATTTGCCTTCTCTTCAAATTTCAACGGA
TTCAACTCAGAAACGGAGAGATGGGGCTCAGTTAAAGAAATCTATCTTGAATTCAGCTCCGCAATTTGATTTGGTTACTTACAATGTTATGCTTCATGTTTATGGGAAAA
TAGGTCGCTCTTGGGATAAAATTTTAGGCTTATTCGATGAAACGAGGAGTGAAGGTTTGCAATTTGATGAGTCTACCTGCAATACTATGACATCTGCTGGTTATGAGCCA
GGAATATCTCTTACAATGCTTTTGTTTGGAAAAGTTGGGATTTACTCAGAGGCCTTAAACATCTTGAAAAAAATTGAGGACAATAATTACACCCCGAACTCTGTTACTTA
CAATGAGCTTGTAGCAGCTTATGTTCGGCCAAGATTCTACGAGGAAGGAGCTGTTGTAATTGACACATGA
Protein sequenceShow/hide protein sequence
HLLQLSLSPNESAHNLKPVNVAKRNVVHLPSLQISTDSTQKRRDGAQLKKSILNSAPQFDLVTYNVMLHVYGKIGRSWDKILGLFDETRSEGLQFDESTCNTMTSAGYEP
GISLTMLLFGKVGIYSEALNILKKIEDNNYTPNSVTYNELVAAYVRPRFYEEGAVVIDT