CuGenDBv2

Gene ID	Lsi11G007710
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	transcription factor bHLH146-like
Genome location	chr11:8812825..8813331
RNA-Seq Expression	Lsi11G007710
Synteny	Lsi11G007710
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR044660 - Transcription factor IBH1-like

Homology

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GenBank top hits

e value

%identity

Alignment

XP_011648935.1 transcription factor bHLH146 [Cucumis sativus]

2.9e-50

74.71

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Query:  MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVS-NGNGNENDFDFSLQTV-KFSQENFGKEEQEEEEEEE
        MF RNYVK+LMTSLVKIS  HQQQQ+NF+KLVKFEVDMAMA SA EF+WGIALKKKLLQR+    GNGNEN FDFS+QTV K SQEN G EE++   EEE
Subjt:  MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVS-NGNGNENDFDFSLQTV-KFSQENFGKEEQEEEEEEE

Query:  EEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNTF
        EEEEEE       ME+GL KLRKIIPGGD+F+IG   +++ DLLKQTESYVKCLELQVNVLRGLVETNTF
Subjt:  EEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNTF

XP_016901419.1 PREDICTED: uncharacterized protein At4g30180 [Cucumis melo]

4.4e-51

75.86

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Query:  MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVSN---GNGNENDFDFSLQTV-KFSQENFGKEEQEEEEE
        MFARNYVK+LMTSLVKIS  HQQQQ+NFQKLV+FEVDMAMA SA EF+WGIALKKKLLQR+      GNG+EN FDFSLQT+ K S +N G EE++  E+
Subjt:  MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVSN---GNGNENDFDFSLQTV-KFSQENFGKEEQEEEEE

Query:  EEEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIG--DLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNTF
        EEEEEEEEEEE    ME+GL KLRKIIPGGDDF+IG  +L+E+D DLLKQTESYVKCLELQVNVLRGLVETNTF
Subjt:  EEEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIG--DLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNTF

XP_022938205.1 transcription factor bHLH146-like [Cucurbita moschata]

2.3e-44

70.83

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Query:  MFARNYVKYLMTSLVKISHHHQQQQE-NFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEE
        MFARNYVKYLMTSL KISHHHQQ QE NFQKLVKFEVDMAMA SA EF+WG ALKKKLLQRE  NG+   N F  SLQ VKFS+EN         E E+E
Subjt:  MFARNYVKYLMTSLVKISHHHQQQQE-NFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEE

Query:  EEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT
        E EE EE EE+K+E+GL KLRKI+PGG +   G+LEED  DL KQTESY+KCLELQVNVLR LV+TNT
Subjt:  EEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT

XP_023538247.1 transcription factor bHLH146-like [Cucurbita pepo subsp. pepo]

1.1e-44

70.83

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Query:  MFARNYVKYLMTSLVKISHHHQQQQE-NFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEE
        MFARNYVKYLMTSL KISHHHQQ QE NFQKLVKFEVDMAMA SA EF+WG ALKKKLLQRE  NG+   N F FSLQTVKFSQEN            E 
Subjt:  MFARNYVKYLMTSLVKISHHHQQQQE-NFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEE

Query:  EEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT
        E EE EE +E K+E+GL KLRKI+PGG +   G+LEED  DL KQTESY+KCLELQVNVLR LV+TNT
Subjt:  EEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT

XP_038877916.1 transcription factor bHLH146-like [Benincasa hispida]

2.8e-53

76.3

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Query:  MFARNYVKYLMTSLVKISH----HHQQQQENFQKLVKFEVDMAMALSAR-EFAWGIALKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEE
        MFARNYVK+LMTSLVKISH    HHQQQ++NFQK VKFEVDMAMA SA  +FAWGIALKKKLLQR+     GNENDFDFSLQTVKFSQEN GK       
Subjt:  MFARNYVKYLMTSLVKISH----HHQQQQENFQKLVKFEVDMAMALSAR-EFAWGIALKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEE

Query:  EEEEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNTF
             EEEEE EEEKKMEHGL KLRKIIPGG DFNI     +D DLLKQTESYVKCLELQVNVLRGLVETNTF
Subjt:  EEEEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNTF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJA7 Uncharacterized protein

1.4e-50

74.71

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Query:  MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVS-NGNGNENDFDFSLQTV-KFSQENFGKEEQEEEEEEE
        MF RNYVK+LMTSLVKIS  HQQQQ+NF+KLVKFEVDMAMA SA EF+WGIALKKKLLQR+    GNGNEN FDFS+QTV K SQEN G EE++   EEE
Subjt:  MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVS-NGNGNENDFDFSLQTV-KFSQENFGKEEQEEEEEEE

Query:  EEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNTF
        EEEEEE       ME+GL KLRKIIPGGD+F+IG   +++ DLLKQTESYVKCLELQVNVLRGLVETNTF
Subjt:  EEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNTF

A0A1S4DZN3 uncharacterized protein At4g30180

2.1e-51

75.86

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Query:  MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVSN---GNGNENDFDFSLQTV-KFSQENFGKEEQEEEEE
        MFARNYVK+LMTSLVKIS  HQQQQ+NFQKLV+FEVDMAMA SA EF+WGIALKKKLLQR+      GNG+EN FDFSLQT+ K S +N G EE++  E+
Subjt:  MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVSN---GNGNENDFDFSLQTV-KFSQENFGKEEQEEEEE

Query:  EEEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIG--DLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNTF
        EEEEEEEEEEE    ME+GL KLRKIIPGGDDF+IG  +L+E+D DLLKQTESYVKCLELQVNVLRGLVETNTF
Subjt:  EEEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIG--DLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNTF

A0A6J1DIU0 transcription factor bHLH146

3.8e-40

65.88

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Query:  MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVSNGNGN-ENDFDFSLQTVKFSQENFGKEEQEEEEEEEE
        MFARNY K LM SL KIS +HQ    N QK+VKFEVDMAMALSA EFAWG ALK+KLLQ++  NGNGN  N FDFSLQT+KFS+                
Subjt:  MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVSNGNGN-ENDFDFSLQTVKFSQENFGKEEQEEEEEEEE

Query:  EEEEEEEEEEKKMEHGLKKLRKIIPGGDDFN--IGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT
        E+EEEEEE++KKME+GL KLRKI+PGG++ N   GDL E+D DLLKQTESY+KCLELQVNVLR LV+TNT
Subjt:  EEEEEEEEEEKKMEHGLKKLRKIIPGGDDFN--IGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT

A0A6J1FJ33 transcription factor bHLH146-like

1.1e-44

70.83

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Query:  MFARNYVKYLMTSLVKISHHHQQQQE-NFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEE
        MFARNYVKYLMTSL KISHHHQQ QE NFQKLVKFEVDMAMA SA EF+WG ALKKKLLQRE  NG+   N F  SLQ VKFS+EN         E E+E
Subjt:  MFARNYVKYLMTSLVKISHHHQQQQE-NFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEE

Query:  EEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT
        E EE EE EE+K+E+GL KLRKI+PGG +   G+LEED  DL KQTESY+KCLELQVNVLR LV+TNT
Subjt:  EEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT

A0A6J1I0E6 transcription factor bHLH146-like

4.3e-44

72.02

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Query:  MFARNYVKYLMTSLVKISHHHQQ-QQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEE
        MFARNYVKYLMTSL KISHHHQQ QQ+NFQKLVKFEVDMAMA SA EF+WG ALKKKLLQRE  NG+   N F FSL  VKFS+EN      E E+EE E
Subjt:  MFARNYVKYLMTSLVKISHHHQQ-QQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEE

Query:  EEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT
        E EE EE EE+K+E+GL KLRKI+PGG +   G+LEED  DL KQTESY+KCLELQVNVLR LV+TNT
Subjt:  EEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT

SwissProt top hits

e value

%identity

Alignment

Q9SUM5 Transcription factor bHLH146

7.7e-06

31.74

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Query:  MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEEE
        +F R Y  +L+ +L K++      + + ++ VK EVDMA+ALSA+EFAW     + LLQ+  S+ N           T   S  + G    E  ++E   
Subjt:  MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEEE

Query:  EEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT
        EE   EE        L++L+K++PGG++ N+        ++L +  +Y+KCLELQ   L+ +V+ +T
Subjt:  EEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT

Arabidopsis top hits

e value

%identity

Alignment

AT2G18969.1 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors

8.7e-13

36.47

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Query:  MFARNYVKYLMTSLVKISHHHQQQQENFQKL---VKFEVDMAMALSAREFAWGIALKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEE
        +FAR YV +L+ +L KI+ +    + N Q L   VK EVDMA ALSA+EFAW   L++KLL           + +D  + T     E   +  + +  E+
Subjt:  MFARNYVKYLMTSLVKISHHHQQQQENFQKL---VKFEVDMAMALSAREFAWGIALKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEE

Query:  EEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT
         ++ +EEEE  E K    LK+L+K++PGG++ N+        ++L +  SY+ CLELQ+ VL+ +V+ NT
Subjt:  EEEEEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT

AT4G30180.1 sequence-specific DNA binding transcription factors;transcription regulators

5.4e-07

31.74

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Query:  MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEEE
        +F R Y  +L+ +L K++      + + ++ VK EVDMA+ALSA+EFAW     + LLQ+  S+ N           T   S  + G    E  ++E   
Subjt:  MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEEE

Query:  EEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT
        EE   EE        L++L+K++PGG++ N+        ++L +  +Y+KCLELQ   L+ +V+ +T
Subjt:  EEEEEEEEEKKMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNT

Sequences

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CDS sequence

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ATGTTTGCAAGAAACTATGTCAAATATTTGATGACATCTTTAGTCAAAATTTCTCATCATCATCAACAACAACAAGAAAATTTTCAGAAACTTGTGAAGTTTGAAGTTGA
CATGGCAATGGCTCTATCAGCAAGAGAATTTGCATGGGGAATTGCTCTAAAAAAGAAGCTTCTTCAAAGAGAAGTTAGCAATGGCAATGGCAATGAAAATGATTTTGATT
TCTCTCTCCAAACAGTCAAATTTTCTCAAGAAAATTTTGGAAAGGAAGAACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAA
AAGATGGAACATGGGTTGAAGAAGCTGAGGAAAATCATACCAGGTGGTGATGATTTTAATATTGGAGATTTGGAAGAAGATGATCATGATTTGTTGAAACAAACTGAAAG
TTATGTAAAATGTCTTGAGTTGCAAGTGAATGTTCTTAGAGGTTTGGTTGAAACAAACACATTTTAA

mRNA sequence

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Protein sequence

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MFARNYVKYLMTSLVKISHHHQQQQENFQKLVKFEVDMAMALSAREFAWGIALKKKLLQREVSNGNGNENDFDFSLQTVKFSQENFGKEEQEEEEEEEEEEEEEEEEEEK
KMEHGLKKLRKIIPGGDDFNIGDLEEDDHDLLKQTESYVKCLELQVNVLRGLVETNTF

Lsi11G007710 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome