; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G008300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G008300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprefoldin subunit 1
Genome locationchr11:10319294..10325965
RNA-Seq ExpressionLsi11G008300
SyntenyLsi11G008300
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016272 - prefoldin complex (cellular component)
GO:0044183 - protein folding chaperone (molecular function)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR002777 - Prefoldin beta-like
IPR009053 - Prefoldin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586128.1 Prefoldin subunit 1, partial [Cucurbita argyrosperma subsp. sororia]7.3e-5492.25Show/hide
Query:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK
        MADEANRATFLEIQGRMIEITGKLKQ+Q+Q+RNKEGEKKRAFLTLEELKQLS+DTNAYKSIGR FVLE KSVLM EQEQKFKDSEA I SLQSSKEYLEK
Subjt:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSVA
        Q AEVENNLRELLQQDPGIARQIMSMSVA
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSVA

XP_004152848.1 prefoldin subunit 1 isoform X1 [Cucumis sativus]1.2e-5696.12Show/hide
Query:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK
        MADE NRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQL+EDTN YKSIGRTFVLESKSVLMNEQEQKFKDSE  IASLQSSKEYLEK
Subjt:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSVA
        QMAEVENNLRELLQQDPGIARQIMSMSVA
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSVA

XP_022149806.1 prefoldin subunit 1 [Momordica charantia]8.6e-5593.02Show/hide
Query:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK
        MADEANR  FLEIQGRMIE+TGKLKQ+QTQIRNKEGEKKRAFLTLEEL+QLSEDTNAYKSIGRTFVLE KSVLMNEQEQK KDSEA IASLQ+SKEYLEK
Subjt:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSVA
        QMAEVENNLRELLQQDPGIARQIMSMSVA
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSVA

XP_022929581.1 prefoldin subunit 1-like [Cucurbita moschata]2.5e-5492.25Show/hide
Query:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK
        MAD+ANRATFLEIQGRMIEITGKLKQ+QTQIRNKEGEKKRAFLTLEELKQLS+DTNAYKSIGRTFVLE KSVLMNEQEQK KDSEA I SL SSKEYLEK
Subjt:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSVA
        Q+AEVENNLRELLQQDPGIARQIMSMS+A
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSVA

XP_023546624.1 prefoldin subunit 1-like [Cucurbita pepo subsp. pepo]5.1e-5593.8Show/hide
Query:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK
        MAD+ANRATFLEIQGRMIEITGKLKQ+QTQIRNKEGEKKRAFLTLEELKQLS+DTNAYKSIGRTFVLE KSVLMNEQEQK KDSEATI SL SSKEYLEK
Subjt:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSVA
        Q+AEVENNLRELLQQDPGIARQIMSMSVA
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSVA

TrEMBL top hitse value%identityAlignment
A0A0A0LJF7 Uncharacterized protein5.8e-5796.12Show/hide
Query:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK
        MADE NRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQL+EDTN YKSIGRTFVLESKSVLMNEQEQKFKDSE  IASLQSSKEYLEK
Subjt:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSVA
        QMAEVENNLRELLQQDPGIARQIMSMSVA
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSVA

A0A1S3BP94 prefoldin subunit 1 isoform X14.6e-5492.97Show/hide
Query:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK
        MA+EANR TFLEIQGRMIEITGKLKQLQTQIR KEGEKKRAFLTLEELKQLSEDTN YKSIGRTFVLESKSVLMNEQEQKFKDSE  IASLQSSKEYLE+
Subjt:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSV
        QMAEVENNLRELLQ DPGIARQIMSMS+
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSV

A0A6J1D9I1 prefoldin subunit 14.2e-5593.02Show/hide
Query:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK
        MADEANR  FLEIQGRMIE+TGKLKQ+QTQIRNKEGEKKRAFLTLEEL+QLSEDTNAYKSIGRTFVLE KSVLMNEQEQK KDSEA IASLQ+SKEYLEK
Subjt:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSVA
        QMAEVENNLRELLQQDPGIARQIMSMSVA
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSVA

A0A6J1ENI7 prefoldin subunit 1-like1.2e-5492.25Show/hide
Query:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK
        MAD+ANRATFLEIQGRMIEITGKLKQ+QTQIRNKEGEKKRAFLTLEELKQLS+DTNAYKSIGRTFVLE KSVLMNEQEQK KDSEA I SL SSKEYLEK
Subjt:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSVA
        Q+AEVENNLRELLQQDPGIARQIMSMS+A
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSVA

A0A6J1FB94 prefoldin subunit 1-like1.8e-5390.7Show/hide
Query:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK
        MADEANRATFLEIQGRMIEITGKLKQ+Q+Q+RNKEGEKKRAFLTLEELKQLS+DTNAYKSIGR FVLE KSVLM EQEQKFKDSEA I SLQSSKEYLEK
Subjt:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSVA
        Q AEVENNL+EL+QQDPGIARQIMSMSVA
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSVA

SwissProt top hitse value%identityAlignment
O60925 Prefoldin subunit 17.2e-1236.45Show/hide
Query:  RATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVE
        +  F E+Q ++I+   K+K    QI      KK A LT  E+  L ++TN Y+ +GR F+L+SK  + ++  +K K +E  I  L+  K YLE+ + E E
Subjt:  RATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVE

Query:  NNLRELL
        +N+RE+L
Subjt:  NNLRELL

Q3SZE2 Prefoldin subunit 11.4e-1237.38Show/hide
Query:  RATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVE
        +  F E+Q ++I+   K+K    QI      KK A LT  E+  L ++TN Y+ +GR F+L+SK  + N+  +K K +E  I  L+  K YLE+ + E E
Subjt:  RATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVE

Query:  NNLRELL
        +N+RE+L
Subjt:  NNLRELL

Q5D016 Prefoldin subunit 12.3e-1034.58Show/hide
Query:  RATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVE
        +  F E+Q +M++   K+K    QI      KK A LT  E+  L E T  ++  GR F+L+SK  + N+  +K K ++  I  L+  K YLE+ + + E
Subjt:  RATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVE

Query:  NNLRELL
        +N+RE+L
Subjt:  NNLRELL

Q5RAM7 Prefoldin subunit 11.9e-1237.38Show/hide
Query:  RATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVE
        +  F E+Q ++I+   K+K    QI      KK A LT  E+  L ++TN Y+ +GR F+L+SK  + N+  +K K +E  I  L+  K YLE+ + E E
Subjt:  RATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVE

Query:  NNLRELL
        +N+RE+L
Subjt:  NNLRELL

Q9CWM4 Prefoldin subunit 11.9e-1237.38Show/hide
Query:  RATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVE
        +  F E+Q ++I+   K+K    QI      KK A LT  E+  L ++TN Y+ +GR F+L+SK V+ N+  +K K ++  I  L+  K YLE+ + E E
Subjt:  RATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVE

Query:  NNLRELL
        +N+RE+L
Subjt:  NNLRELL

Arabidopsis top hitse value%identityAlignment
AT2G07340.1 PREFOLDIN 15.8e-4978.12Show/hide
Query:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK
        MADEA RA F+EIQ  MIE+TGKLKQ+Q Q+RNKEG++KRAFLTLEEL+ L E+TN YKSIGRTFVLE K+VL  EQEQK KDSEA +ASLQ+SKEYLEK
Subjt:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSV
        Q+AEVENNLRELLQQ+PGIA+QIMSMS+
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSV

AT2G07340.2 PREFOLDIN 11.2e-4676.56Show/hide
Query:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK
        MADEA RA F+EIQ  MIE+TGKLKQ+Q Q+RNKEG++KRAFLTLEEL+ L E+TN YKSIG+ FVLE K+VL  EQEQK KDSEA +ASLQ+SKEYLEK
Subjt:  MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEK

Query:  QMAEVENNLRELLQQDPGIARQIMSMSV
        Q+AEVENNLRELLQQ+PGIA+QIMSMS+
Subjt:  QMAEVENNLRELLQQDPGIARQIMSMSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACGAGGCGAACAGAGCTACTTTCTTGGAAATTCAAGGTCGCATGATTGAGATTACTGGAAAGCTGAAGCAGTTGCAGACTCAGATACGAAACAAGGAGGGAGA
GAAGAAGCGTGCTTTTTTAACCTTGGAGGAACTTAAACAGTTGTCTGAAGACACTAATGCATACAAATCTATAGGGAGAACGTTTGTTTTAGAGTCAAAGTCAGTTTTAA
TGAATGAACAGGAGCAAAAGTTCAAGGATAGTGAAGCTACAATTGCCTCGCTCCAGAGCTCGAAGGAGTATTTAGAGAAGCAGATGGCTGAGGTGGAGAACAACTTGAGG
GAGCTGTTGCAACAAGATCCAGGTATAGCTCGCCAGATTATGTCCATGTCTGTAGCATAG
mRNA sequenceShow/hide mRNA sequence
GGTACATCACAATTAATCAGACCCTAGATAGTGCGACAATTCATATTGGTAATAAGCATCGTTTACACGACCTCTGATCTTCGAAATGGCGGACGAGGCGAACAGAGCTA
CTTTCTTGGAAATTCAAGGTCGCATGATTGAGATTACTGGAAAGCTGAAGCAGTTGCAGACTCAGATACGAAACAAGGAGGGAGAGAAGAAGCGTGCTTTTTTAACCTTG
GAGGAACTTAAACAGTTGTCTGAAGACACTAATGCATACAAATCTATAGGGAGAACGTTTGTTTTAGAGTCAAAGTCAGTTTTAATGAATGAACAGGAGCAAAAGTTCAA
GGATAGTGAAGCTACAATTGCCTCGCTCCAGAGCTCGAAGGAGTATTTAGAGAAGCAGATGGCTGAGGTGGAGAACAACTTGAGGGAGCTGTTGCAACAAGATCCAGGTA
TAGCTCGCCAGATTATGTCCATGTCTGTAGCATAGGGAAGGCTCTCCCCCCTTGGAATTGACATTAGCTTAGCTTTTTGTATTGAATGTTCTCACATTATTGTGTTGTGA
GTTGTGATTCTACTTTGCTGGCTTCTATAGTTTCTGATGCCAAAAATTTGTTTCATATGCAATTCATACTCCCAAGTTCCGAACTCTGTTTGAAGGGTTTATTTATTTAT
TGGTTGATAAGATTGTTTGAAGATTAAGACATCAAGTAACCTTGTTGGTTGAGACTTCGAAATTGGTTGATTGTGTGCAGTTGTAATAAACACCGTAGTGTAAGTTGTAA
TAAACTCAATTTCTAAGCATAGTTGGAAAGAACATGAAAAAACGTATAAAAACGAGTGGTCATTTAGCTAAAACGAAGTTGTATCGATATGCCAAAAACAAAATTATCGT
ATGTGCAGAAAAAGTGCGTGATCGTTGACATCATGGTACGTGATCGTTTATGTCATGGTGTACGATCGCTGACTTCATGGTACACAATCGCTGATGTCATGGTGCACGAT
CGCTTACATTAGGGTGCACGATCGCTAACCTCATGGTGCGCGATCGTTTTGCAATTTTGTTTTAGTCATATATCCG
Protein sequenceShow/hide protein sequence
MADEANRATFLEIQGRMIEITGKLKQLQTQIRNKEGEKKRAFLTLEELKQLSEDTNAYKSIGRTFVLESKSVLMNEQEQKFKDSEATIASLQSSKEYLEKQMAEVENNLR
ELLQQDPGIARQIMSMSVA