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Lsi11G008360 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G008360
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr11:10440093..10440455
RNA-Seq ExpressionLsi11G008360
SyntenyLsi11G008360
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651697.1 hypothetical protein Csa_006343 [Cucumis sativus]1.1e-2675.32Show/hide
Query:  MATQKLVTISVVVLVIFAYFVSTMKGDVLDVHCVRPCSDTYDDESCYNDCVRENNGAGFCYPKLPGIFSEKDCCCNI
        MATQKL T+S+V+L+I A  VST KGDVL+V+CVRPCSDTYDDESCYNDC+REN GAGFCYPKLP   ++KDCCCN+
Subjt:  MATQKLVTISVVVLVIFAYFVSTMKGDVLDVHCVRPCSDTYDDESCYNDCVRENNGAGFCYPKLPGIFSEKDCCCNI

KAE8651701.1 hypothetical protein Csa_006400, partial [Cucumis sativus]9.7e-1867.74Show/hide
Query:  VIFAYFVSTMKGDVLDVHCVRPCSDTYDDESCYNDCVRENNGAGFCYPKLPGIFSEKDCCCN
        +IF   ++  KGDVL++HCV+PCSDTYDDESCYNDC++EN GAGFCYPKLP   ++KDCCC+
Subjt:  VIFAYFVSTMKGDVLDVHCVRPCSDTYDDESCYNDCVRENNGAGFCYPKLPGIFSEKDCCCN

KAG6586428.1 hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sororia]7.9e-2059.21Show/hide
Query:  MATQKLVTISVVVLVIFAYFVSTMKGDVLDVHCVRPCSDTYDDESCYNDCVRENNGAGFCYPKLPGIFSEKDCCCN
        MA++KL T+  +V+++F YF S+ KGD+  + C+RPC D +DD+SCY+DCVR N GAGFCYPKLP + +EKDCCCN
Subjt:  MATQKLVTISVVVLVIFAYFVSTMKGDVLDVHCVRPCSDTYDDESCYNDCVRENNGAGFCYPKLPGIFSEKDCCCN

KGN54497.1 hypothetical protein Csa_012842 [Cucumis sativus]8.0e-1251.32Show/hide
Query:  MATQKLVTISVVVLVIFAYFVSTMKGDVLDVHCVRPCSDTYDDESCYNDCVRENNGAGFCYPKLPGIFSEKDCCCN
        M TQKL  +S++V V F+ F S+M+GD L  +CV PCS+   D  C   C+ ++ GAGFC PKLPGI   K CCCN
Subjt:  MATQKLVTISVVVLVIFAYFVSTMKGDVLDVHCVRPCSDTYDDESCYNDCVRENNGAGFCYPKLPGIFSEKDCCCN

KGN61228.1 hypothetical protein Csa_006463 [Cucumis sativus]1.0e-2777.92Show/hide
Query:  MATQKLVTISVVVLVIFAYFVSTMKGDVLDVHCVRPCSDTYDDESCYNDCVRENNGAGFCYPKLPGIFSEKDCCCNI
        MATQKL TIS+VVL+IFA   ST KGDVL+VHCVRPCSDTYDDESCYNDC++EN GAGFCYPKLP   ++KDCCCN+
Subjt:  MATQKLVTISVVVLVIFAYFVSTMKGDVLDVHCVRPCSDTYDDESCYNDCVRENNGAGFCYPKLPGIFSEKDCCCNI

TrEMBL top hitse value%identityAlignment
A0A0A0L1R8 Uncharacterized protein3.9e-1251.32Show/hide
Query:  MATQKLVTISVVVLVIFAYFVSTMKGDVLDVHCVRPCSDTYDDESCYNDCVRENNGAGFCYPKLPGIFSEKDCCCN
        M TQKL  +S++V V F+ F S+M+GD L  +CV PCS+   D  C   C+ ++ GAGFC PKLPGI   K CCCN
Subjt:  MATQKLVTISVVVLVIFAYFVSTMKGDVLDVHCVRPCSDTYDDESCYNDCVRENNGAGFCYPKLPGIFSEKDCCCN

A0A0A0LHG9 Uncharacterized protein5.0e-2877.92Show/hide
Query:  MATQKLVTISVVVLVIFAYFVSTMKGDVLDVHCVRPCSDTYDDESCYNDCVRENNGAGFCYPKLPGIFSEKDCCCNI
        MATQKL TIS+VVL+IFA   ST KGDVL+VHCVRPCSDTYDDESCYNDC++EN GAGFCYPKLP   ++KDCCCN+
Subjt:  MATQKLVTISVVVLVIFAYFVSTMKGDVLDVHCVRPCSDTYDDESCYNDCVRENNGAGFCYPKLPGIFSEKDCCCNI

A0A0A0LJG5 Uncharacterized protein1.1e-2780.26Show/hide
Query:  MATQKLVTISVVVLVIFAYFVSTMKGDVLDVHCVRPCSDTYDDESCYNDCVRENNGAGFCYPKLPGIFSEKDCCCN
        MATQKL TIS+VVLVIF   VST KGDVL+VHCVRPC DTYDDESCYNDC+REN GAGFCYPKLP   ++KDCCCN
Subjt:  MATQKLVTISVVVLVIFAYFVSTMKGDVLDVHCVRPCSDTYDDESCYNDCVRENNGAGFCYPKLPGIFSEKDCCCN

A0A0A0LKF5 Uncharacterized protein1.3e-2080Show/hide
Query:  TMKGDVLDVHCVRPCSDTYDDESCYNDCVRENNGAGFCYPKLPGIFSEKDCCCNI
        T KGD+L+VHCVRPCSDTYDDESCYNDC+REN GAGFCYPKLP   ++KDCCCN+
Subjt:  TMKGDVLDVHCVRPCSDTYDDESCYNDCVRENNGAGFCYPKLPGIFSEKDCCCNI

A0A5A7TJH1 Uncharacterized protein4.4e-0845.33Show/hide
Query:  MATQKLVTISVVVLVIFAYFVSTMKGDVLDVHCVRPCSDTYDDESCYNDCVRENNGAGFCYPKLPGIFSEKDCCC
        M T+KL+ + V + V+ A FV+  +G  L  +C+RPCS+TY   SCY DC   N G G C PK P +  E  CCC
Subjt:  MATQKLVTISVVVLVIFAYFVSTMKGDVLDVHCVRPCSDTYDDESCYNDCVRENNGAGFCYPKLPGIFSEKDCCC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGCATAAGCATCCAAAGTGCCTGAGAGACATGGCAACTCAGAAGCTTGTTACAATATCAGTTGTTGTCTTGGTTATATTCGCATATTTTGTTTCAACAATGAAAGGAGA
CGTGTTGGACGTACATTGTGTTCGACCATGTTCTGACACTTATGACGACGAGTCATGTTATAATGATTGTGTTCGAGAGAATAATGGTGCTGGATTTTGTTACCCAAAAC
TACCTGGCATTTTTAGTGAAAAAGATTGTTGTTGTAATATTTGA
mRNA sequenceShow/hide mRNA sequence
AAGCATAAGCATCCAAAGTGCCTGAGAGACATGGCAACTCAGAAGCTTGTTACAATATCAGTTGTTGTCTTGGTTATATTCGCATATTTTGTTTCAACAATGAAAGGAGA
CGTGTTGGACGTACATTGTGTTCGACCATGTTCTGACACTTATGACGACGAGTCATGTTATAATGATTGTGTTCGAGAGAATAATGGTGCTGGATTTTGTTACCCAAAAC
TACCTGGCATTTTTAGTGAAAAAGATTGTTGTTGTAATATTTGA
Protein sequenceShow/hide protein sequence
KHKHPKCLRDMATQKLVTISVVVLVIFAYFVSTMKGDVLDVHCVRPCSDTYDDESCYNDCVRENNGAGFCYPKLPGIFSEKDCCCNI