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Lsi11G008370 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G008370
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr11:10444871..10445393
RNA-Seq ExpressionLsi11G008370
SyntenyLsi11G008370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651697.1 hypothetical protein Csa_006343 [Cucumis sativus]6.8e-2572.73Show/hide
Query:  MVTQKLVTISVVVLVIFACFVSTTKGDVLDVHCVRPCSDTYDDDSCYNDCVQENNSAGFCYPKLSDISSEKDCCCNI
        M TQKL T+S+V+L+I AC VSTTKGDVL+V+CVRPCSDTYDD+SCYNDC++EN  AGFCYPKL   S++KDCCCN+
Subjt:  MVTQKLVTISVVVLVIFACFVSTTKGDVLDVHCVRPCSDTYDDDSCYNDCVQENNSAGFCYPKLSDISSEKDCCCNI

KAE8651701.1 hypothetical protein Csa_006400, partial [Cucumis sativus]4.9e-1564.52Show/hide
Query:  VIFACFVSTTKGDVLDVHCVRPCSDTYDDDSCYNDCVQENNSAGFCYPKLSDISSEKDCCCN
        +IF   ++  KGDVL++HCV+PCSDTYDD+SCYNDC++EN  AGFCYPKL   S++KDCCC+
Subjt:  VIFACFVSTTKGDVLDVHCVRPCSDTYDDDSCYNDCVQENNSAGFCYPKLSDISSEKDCCCN

KAG6586428.1 hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sororia]9.9e-1653.95Show/hide
Query:  MVTQKLVTISVVVLVIFACFVSTTKGDVLDVHCVRPCSDTYDDDSCYNDCVQENNSAGFCYPKLSDISSEKDCCCN
        M ++KL T+  +V+++F  F S+ KGD+  + C+RPC D +DDDSCY+DCV+ N  AGFCYPKL  +++EKDCCCN
Subjt:  MVTQKLVTISVVVLVIFACFVSTTKGDVLDVHCVRPCSDTYDDDSCYNDCVQENNSAGFCYPKLSDISSEKDCCCN

KGN54497.1 hypothetical protein Csa_012842 [Cucumis sativus]6.2e-1050Show/hide
Query:  MVTQKLVTISVVVLVIFACFVSTTKGDVLDVHCVRPCSDTYDDDSCYNDCVQENNSAGFCYPKLSDISSEKDCCCN
        MVTQKL  +S++V V F+CF S+ +GD L  +CV PCS+   D  C   C++++  AGFC PKL  IS  K CCCN
Subjt:  MVTQKLVTISVVVLVIFACFVSTTKGDVLDVHCVRPCSDTYDDDSCYNDCVQENNSAGFCYPKLSDISSEKDCCCN

KGN61228.1 hypothetical protein Csa_006463 [Cucumis sativus]7.3e-2777.92Show/hide
Query:  MVTQKLVTISVVVLVIFACFVSTTKGDVLDVHCVRPCSDTYDDDSCYNDCVQENNSAGFCYPKLSDISSEKDCCCNI
        M TQKL TIS+VVL+IFAC  STTKGDVL+VHCVRPCSDTYDD+SCYNDC+QEN  AGFCYPKL   S++KDCCCN+
Subjt:  MVTQKLVTISVVVLVIFACFVSTTKGDVLDVHCVRPCSDTYDDDSCYNDCVQENNSAGFCYPKLSDISSEKDCCCNI

TrEMBL top hitse value%identityAlignment
A0A0A0L1R8 Uncharacterized protein3.0e-1050Show/hide
Query:  MVTQKLVTISVVVLVIFACFVSTTKGDVLDVHCVRPCSDTYDDDSCYNDCVQENNSAGFCYPKLSDISSEKDCCCN
        MVTQKL  +S++V V F+CF S+ +GD L  +CV PCS+   D  C   C++++  AGFC PKL  IS  K CCCN
Subjt:  MVTQKLVTISVVVLVIFACFVSTTKGDVLDVHCVRPCSDTYDDDSCYNDCVQENNSAGFCYPKLSDISSEKDCCCN

A0A0A0LHG9 Uncharacterized protein3.5e-2777.92Show/hide
Query:  MVTQKLVTISVVVLVIFACFVSTTKGDVLDVHCVRPCSDTYDDDSCYNDCVQENNSAGFCYPKLSDISSEKDCCCNI
        M TQKL TIS+VVL+IFAC  STTKGDVL+VHCVRPCSDTYDD+SCYNDC+QEN  AGFCYPKL   S++KDCCCN+
Subjt:  MVTQKLVTISVVVLVIFACFVSTTKGDVLDVHCVRPCSDTYDDDSCYNDCVQENNSAGFCYPKLSDISSEKDCCCNI

A0A0A0LJG5 Uncharacterized protein6.7e-2677.63Show/hide
Query:  MVTQKLVTISVVVLVIFACFVSTTKGDVLDVHCVRPCSDTYDDDSCYNDCVQENNSAGFCYPKLSDISSEKDCCCN
        M TQKL TIS+VVLVIF C VSTTKGDVL+VHCVRPC DTYDD+SCYNDC++EN  AGFCYPKL   S++KDCCCN
Subjt:  MVTQKLVTISVVVLVIFACFVSTTKGDVLDVHCVRPCSDTYDDDSCYNDCVQENNSAGFCYPKLSDISSEKDCCCN

A0A0A0LKF5 Uncharacterized protein8.7e-1874.55Show/hide
Query:  TTKGDVLDVHCVRPCSDTYDDDSCYNDCVQENNSAGFCYPKLSDISSEKDCCCNI
        T KGD+L+VHCVRPCSDTYDD+SCYNDC++EN  AGFCYPKL   S++KDCCCN+
Subjt:  TTKGDVLDVHCVRPCSDTYDDDSCYNDCVQENNSAGFCYPKLSDISSEKDCCCNI

A0A5A7TJH1 Uncharacterized protein4.1e-0745.33Show/hide
Query:  MVTQKLVTISVVVLVIFACFVSTTKGDVLDVHCVRPCSDTYDDDSCYNDCVQENNSAGFCYPKLSDISSEKDCCC
        M T+KL+ + V + V+ ACFV+ ++G  L  +C+RPCS+TY   SCY DC   N   G C PK   +S E  CCC
Subjt:  MVTQKLVTISVVVLVIFACFVSTTKGDVLDVHCVRPCSDTYDDDSCYNDCVQENNSAGFCYPKLSDISSEKDCCC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTATAAAACATATCCATCGAACTATAAGCATCCAAAGCGCCTAAGAGACATGGTAACTCAGAAGCTTGTTACAATATCAGTTGTTGTCCTGGTGATATTCGCCTG
TTTTGTATCAACAACGAAAGGAGACGTGTTGGATGTACATTGTGTTCGACCATGTTCTGACACTTATGACGATGATTCTTGTTATAATGATTGTGTTCAAGAGAATAATA
GTGCTGGATTTTGTTACCCAAAGCTATCTGATATTTCTAGTGAAAAAGATTGTTGTTGCAATATTTGA
mRNA sequenceShow/hide mRNA sequence
CTGTCCTTTTGAAGTTCTTAGAAAGAAACGCTTTAAAAACATCACTACATGTTCTATAAAACATATCCATCGAACTATAAGCATCCAAAGCGCCTAAGAGACATGGTAAC
TCAGAAGCTTGTTACAATATCAGTTGTTGTCCTGGTGATATTCGCCTGTTTTGTATCAACAACGAAAGGAGACGTGTTGGATGTACATTGTGTTCGACCATGTTCTGACA
CTTATGACGATGATTCTTGTTATAATGATTGTGTTCAAGAGAATAATAGTGCTGGATTTTGTTACCCAAAGCTATCTGATATTTCTAGTGAAAAAGATTGTTGTTGCAAT
ATTTGATCAAACAAAGAGAAATATTTTTGTTTCTCAATATAAGATTGTGTAACATTTATCTTGAACTCTTTAATAAAATTTATTATTCTATAA
Protein sequenceShow/hide protein sequence
MFYKTYPSNYKHPKRLRDMVTQKLVTISVVVLVIFACFVSTTKGDVLDVHCVRPCSDTYDDDSCYNDCVQENNSAGFCYPKLSDISSEKDCCCNI