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Lsi11G008380 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G008380
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr11:10454580..10454923
RNA-Seq ExpressionLsi11G008380
SyntenyLsi11G008380
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651697.1 hypothetical protein Csa_006343 [Cucumis sativus]2.8e-2474.03Show/hide
Query:  MATQKLITISVVVLMIFTCLVSTTKEDVLNVHCVRPCSNTYDDESCYDDCVRENNGARFCYPKLPNISGEKDYCCNI
        MATQKL T+S+V+LMI  C+VSTTK DVLNV+CVRPCS+TYDDESCY+DC+REN GA FCYPKLP  S +KD CCN+
Subjt:  MATQKLITISVVVLMIFTCLVSTTKEDVLNVHCVRPCSNTYDDESCYDDCVRENNGARFCYPKLPNISGEKDYCCNI

KAE8651701.1 hypothetical protein Csa_006400, partial [Cucumis sativus]2.6e-1471.15Show/hide
Query:  KEDVLNVHCVRPCSNTYDDESCYDDCVRENNGARFCYPKLPNISGEKDYCCN
        K DVLN+HCV+PCS+TYDDESCY+DC++EN GA FCYPKLP  S +KD CC+
Subjt:  KEDVLNVHCVRPCSNTYDDESCYDDCVRENNGARFCYPKLPNISGEKDYCCN

KAG6586428.1 hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sororia]4.0e-1553.95Show/hide
Query:  MATQKLITISVVVLMIFTCLVSTTKEDVLNVHCVRPCSNTYDDESCYDDCVRENNGARFCYPKLPNISGEKDYCCN
        MA++KL T+  +V+M+F    S+ K D+  + C+RPC + +DD+SCYDDCVR N GA FCYPKLP+++ EKD CCN
Subjt:  MATQKLITISVVVLMIFTCLVSTTKEDVLNVHCVRPCSNTYDDESCYDDCVRENNGARFCYPKLPNISGEKDYCCN

KGN54497.1 hypothetical protein Csa_012842 [Cucumis sativus]1.1e-0746.05Show/hide
Query:  MATQKLITISVVVLMIFTCLVSTTKEDVLNVHCVRPCSNTYDDESCYDDCVRENNGARFCYPKLPNISGEKDYCCN
        M TQKL  +S++V + F+C  S+ + D L  +CV PCSN   D  C   C+ ++ GA FC PKLP IS  K  CCN
Subjt:  MATQKLITISVVVLMIFTCLVSTTKEDVLNVHCVRPCSNTYDDESCYDDCVRENNGARFCYPKLPNISGEKDYCCN

KGN61228.1 hypothetical protein Csa_006463 [Cucumis sativus]2.5e-2576.62Show/hide
Query:  MATQKLITISVVVLMIFTCLVSTTKEDVLNVHCVRPCSNTYDDESCYDDCVRENNGARFCYPKLPNISGEKDYCCNI
        MATQKL TIS+VVLMIF C+ STTK DVLNVHCVRPCS+TYDDESCY+DC++EN GA FCYPKLP  S +KD CCN+
Subjt:  MATQKLITISVVVLMIFTCLVSTTKEDVLNVHCVRPCSNTYDDESCYDDCVRENNGARFCYPKLPNISGEKDYCCNI

TrEMBL top hitse value%identityAlignment
A0A0A0L1R8 Uncharacterized protein5.1e-0846.05Show/hide
Query:  MATQKLITISVVVLMIFTCLVSTTKEDVLNVHCVRPCSNTYDDESCYDDCVRENNGARFCYPKLPNISGEKDYCCN
        M TQKL  +S++V + F+C  S+ + D L  +CV PCSN   D  C   C+ ++ GA FC PKLP IS  K  CCN
Subjt:  MATQKLITISVVVLMIFTCLVSTTKEDVLNVHCVRPCSNTYDDESCYDDCVRENNGARFCYPKLPNISGEKDYCCN

A0A0A0LHG9 Uncharacterized protein1.2e-2576.62Show/hide
Query:  MATQKLITISVVVLMIFTCLVSTTKEDVLNVHCVRPCSNTYDDESCYDDCVRENNGARFCYPKLPNISGEKDYCCNI
        MATQKL TIS+VVLMIF C+ STTK DVLNVHCVRPCS+TYDDESCY+DC++EN GA FCYPKLP  S +KD CCN+
Subjt:  MATQKLITISVVVLMIFTCLVSTTKEDVLNVHCVRPCSNTYDDESCYDDCVRENNGARFCYPKLPNISGEKDYCCNI

A0A0A0LJG5 Uncharacterized protein6.0e-2577.63Show/hide
Query:  MATQKLITISVVVLMIFTCLVSTTKEDVLNVHCVRPCSNTYDDESCYDDCVRENNGARFCYPKLPNISGEKDYCCN
        MATQKL TIS+VVL+IF C+VSTTK DVLNVHCVRPC +TYDDESCY+DC+REN GA FCYPKLP  S +KD CCN
Subjt:  MATQKLITISVVVLMIFTCLVSTTKEDVLNVHCVRPCSNTYDDESCYDDCVRENNGARFCYPKLPNISGEKDYCCN

A0A0A0LKF5 Uncharacterized protein4.6e-1774.55Show/hide
Query:  TTKEDVLNVHCVRPCSNTYDDESCYDDCVRENNGARFCYPKLPNISGEKDYCCNI
        T K D+LNVHCVRPCS+TYDDESCY+DC+REN GA FCYPKLP  S +KD CCN+
Subjt:  TTKEDVLNVHCVRPCSNTYDDESCYDDCVRENNGARFCYPKLPNISGEKDYCCNI

A0A5A7TJH1 Uncharacterized protein1.5e-0440Show/hide
Query:  MATQKLITISVVVLMIFTCLVSTTKEDVLNVHCVRPCSNTYDDESCYDDCVRENNGARFCYPKLPNISGEKDYCC
        M T+KL+ + V + ++  C V+ ++   L  +C+RPCS TY   SCY DC   N G   C PK P +S E   CC
Subjt:  MATQKLITISVVVLMIFTCLVSTTKEDVLNVHCVRPCSNTYDDESCYDDCVRENNGARFCYPKLPNISGEKDYCC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTCAAAAGCTTATTACAATATCAGTTGTTGTCTTGATGATATTCACTTGTTTAGTATCAACAACGAAAGAAGACGTGTTGAACGTGCATTGTGTTCGGCCATG
TTCTAACACTTATGACGACGAGTCATGTTATGATGATTGTGTTCGAGAGAATAATGGTGCTAGATTTTGTTATCCAAAGCTACCTAACATTTCTGGTGAAAAAGATTATT
GTTGCAATATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTCAAAAGCTTATTACAATATCAGTTGTTGTCTTGATGATATTCACTTGTTTAGTATCAACAACGAAAGAAGACGTGTTGAACGTGCATTGTGTTCGGCCATG
TTCTAACACTTATGACGACGAGTCATGTTATGATGATTGTGTTCGAGAGAATAATGGTGCTAGATTTTGTTATCCAAAGCTACCTAACATTTCTGGTGAAAAAGATTATT
GTTGCAATATTTGA
Protein sequenceShow/hide protein sequence
MATQKLITISVVVLMIFTCLVSTTKEDVLNVHCVRPCSNTYDDESCYDDCVRENNGARFCYPKLPNISGEKDYCCNI