CuGenDBv2

Gene ID	Lsi11G008520
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	L10-interacting MYB domain-containing protein-like
Genome location	chr11:10736748..10737444
RNA-Seq Expression	Lsi11G008520
Synteny	Lsi11G008520
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0053615.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]

6.4e-81

76.85

Show/hide

Query:  MPRNGWDPLLGTITLEDEQWNDLFKVNKRAKKFLKNGCPHYAKLMRIFGDTTATGVNACPSTKLPSDSED--ENDVGSNTNFVGEENDNEKSRKRVRRKR
        M  NGWDPLLGTI LE+EQWN+LFKVNKRAKKF K+GCPHY KL+RIFGDTTATGVNACPST+L SDSED  ENDV SNTN   EEN+  KS+KR RRK+
Subjt:  MPRNGWDPLLGTITLEDEQWNDLFKVNKRAKKFLKNGCPHYAKLMRIFGDTTATGVNACPSTKLPSDSED--ENDVGSNTNFVGEENDNEKSRKRVRRKR

Query:  DEFCSFLSSFIHVYAENAKRKNDILEKRSFSSIVSQVDEGQLSRKKDEVDEELMKCFKFLNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFI
        DEF SF SSF+ VYAENAKRKNDILEKRSF    SQVDE Q S KKD++ EELM+C   LNTMED+DGEAY+K+LKLLHGDLAWRKLFL MPDSRK+DFI
Subjt:  DEFCSFLSSFIHVYAENAKRKNDILEKRSFSSIVSQVDEGQLSRKKDEVDEELMKCFKFLNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFI

Query:  NSI
        NS+
Subjt:  NSI

KAA0061221.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]

1.4e-80

75.86

Show/hide

Query:  MPRNGWDPLLGTITLEDEQWNDLFKVNKRAKKFLKNGCPHYAKLMRIFGDTTATGVNACPSTKLPSDSED--ENDVGSNTNFVGEENDNEKSRKRVRRKR
        M  N WDPLLGTI LE+EQWN+LFKVNKRAKKF K+GCPHY KL+RIFGDTTATGVNACPST+L SDSED  ENDV SNTN   EEN+  KS+KR RRK+
Subjt:  MPRNGWDPLLGTITLEDEQWNDLFKVNKRAKKFLKNGCPHYAKLMRIFGDTTATGVNACPSTKLPSDSED--ENDVGSNTNFVGEENDNEKSRKRVRRKR

Query:  DEFCSFLSSFIHVYAENAKRKNDILEKRSFSSIVSQVDEGQLSRKKDEVDEELMKCFKFLNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFI
        D+F SF SSF+ VYAENAKRKNDILEKRSF    SQVDE Q S KKD++ EELM+C   LNTMED+DGEAY+K+LKLLHGDLAWRKLFL MPDSRK+DFI
Subjt:  DEFCSFLSSFIHVYAENAKRKNDILEKRSFSSIVSQVDEGQLSRKKDEVDEELMKCFKFLNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFI

Query:  NSI
        NS+
Subjt:  NSI

KAA0066986.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]

4.6e-79

74.88

Show/hide

Query:  MPRNGWDPLLGTITLEDEQWNDLFKVNKRAKKFLKNGCPHYAKLMRIFGDTTATGVNACPSTKLPSDSED--ENDVGSNTNFVGEENDNEKSRKRVRRKR
        M  NGWDPLLGTI LE+EQWN+LFKVNKR KKF K+GCPHY KL+RIFGDTTATGVNACPST+L S SED  ENDV SNTN   EEN+  KS+KR RRK+
Subjt:  MPRNGWDPLLGTITLEDEQWNDLFKVNKRAKKFLKNGCPHYAKLMRIFGDTTATGVNACPSTKLPSDSED--ENDVGSNTNFVGEENDNEKSRKRVRRKR

Query:  DEFCSFLSSFIHVYAENAKRKNDILEKRSFSSIVSQVDEGQLSRKKDEVDEELMKCFKFLNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFI
        DEF SF SSF+ VYAENAKRKN+ILEKRSF    SQVDE Q S KKD++ EELM+C   LNTMED+DGEAY+K+LKLLH DLAWRKLFL MPDSRK+DFI
Subjt:  DEFCSFLSSFIHVYAENAKRKNDILEKRSFSSIVSQVDEGQLSRKKDEVDEELMKCFKFLNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFI

Query:  NSI
        NS+
Subjt:  NSI

TYJ96795.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]

4.4e-82

76.85

Show/hide

Query:  MPRNGWDPLLGTITLEDEQWNDLFKVNKRAKKFLKNGCPHYAKLMRIFGDTTATGVNACPSTKLPSDSED--ENDVGSNTNFVGEENDNEKSRKRVRRKR
        M  NGWDPLLGTI LE+EQWN+LFKVNKRAKKF K+GCPHY KL+RIFGDTTATGVNACPST+L SDSED  ENDV SNTN   EEN+  KS+KR RRK+
Subjt:  MPRNGWDPLLGTITLEDEQWNDLFKVNKRAKKFLKNGCPHYAKLMRIFGDTTATGVNACPSTKLPSDSED--ENDVGSNTNFVGEENDNEKSRKRVRRKR

Query:  DEFCSFLSSFIHVYAENAKRKNDILEKRSFSSIVSQVDEGQLSRKKDEVDEELMKCFKFLNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFI
        DEF SF SSF+ VYAENAKRKNDILEKRSF    SQVDE Q S KKD++ EELM+C   LNTMED+DGEAY+K+LKLLHGDLAWRKLFL MPDSRK+DFI
Subjt:  DEFCSFLSSFIHVYAENAKRKNDILEKRSFSSIVSQVDEGQLSRKKDEVDEELMKCFKFLNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFI

Query:  NSI
        NS+
Subjt:  NSI

TYK06268.1 L10-interacting MYB domain-containing protein-like [Cucumis melo var. makuwa]

4.9e-81

76.35

Show/hide

Query:  MPRNGWDPLLGTITLEDEQWNDLFKVNKRAKKFLKNGCPHYAKLMRIFGDTTATGVNACPSTKLPSDSED--ENDVGSNTNFVGEENDNEKSRKRVRRKR
        M  N WDPLLGTI LE+EQWN+LFKVNKRAKKF K+GCPHY KL+RIFGDTTATGVNACPST+L SDSED  ENDV SNTN   EEN+  KS+KR RRK+
Subjt:  MPRNGWDPLLGTITLEDEQWNDLFKVNKRAKKFLKNGCPHYAKLMRIFGDTTATGVNACPSTKLPSDSED--ENDVGSNTNFVGEENDNEKSRKRVRRKR

Query:  DEFCSFLSSFIHVYAENAKRKNDILEKRSFSSIVSQVDEGQLSRKKDEVDEELMKCFKFLNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFI
        DEF SF SSF+ VYAENAKRKNDILEKRSF    SQVDE Q S KKD++ EELM+C   LNTMED+DGEAY+K+LKLLHGDLAWRKLFL MPDSRK+DFI
Subjt:  DEFCSFLSSFIHVYAENAKRKNDILEKRSFSSIVSQVDEGQLSRKKDEVDEELMKCFKFLNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFI

Query:  NSI
        NS+
Subjt:  NSI

TrEMBL top hits

e value

%identity

Alignment

A0A5A7UIT7 L10-interacting MYB domain-containing protein-like

3.1e-81

76.85

Show/hide

Query:  MPRNGWDPLLGTITLEDEQWNDLFKVNKRAKKFLKNGCPHYAKLMRIFGDTTATGVNACPSTKLPSDSED--ENDVGSNTNFVGEENDNEKSRKRVRRKR
        M  NGWDPLLGTI LE+EQWN+LFKVNKRAKKF K+GCPHY KL+RIFGDTTATGVNACPST+L SDSED  ENDV SNTN   EEN+  KS+KR RRK+
Subjt:  MPRNGWDPLLGTITLEDEQWNDLFKVNKRAKKFLKNGCPHYAKLMRIFGDTTATGVNACPSTKLPSDSED--ENDVGSNTNFVGEENDNEKSRKRVRRKR

Query:  DEFCSFLSSFIHVYAENAKRKNDILEKRSFSSIVSQVDEGQLSRKKDEVDEELMKCFKFLNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFI
        DEF SF SSF+ VYAENAKRKNDILEKRSF    SQVDE Q S KKD++ EELM+C   LNTMED+DGEAY+K+LKLLHGDLAWRKLFL MPDSRK+DFI
Subjt:  DEFCSFLSSFIHVYAENAKRKNDILEKRSFSSIVSQVDEGQLSRKKDEVDEELMKCFKFLNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFI

Query:  NSI
        NS+
Subjt:  NSI

A0A5A7V5Z1 L10-interacting MYB domain-containing protein-like

6.9e-81

75.86

Show/hide

Query:  MPRNGWDPLLGTITLEDEQWNDLFKVNKRAKKFLKNGCPHYAKLMRIFGDTTATGVNACPSTKLPSDSED--ENDVGSNTNFVGEENDNEKSRKRVRRKR
        M  N WDPLLGTI LE+EQWN+LFKVNKRAKKF K+GCPHY KL+RIFGDTTATGVNACPST+L SDSED  ENDV SNTN   EEN+  KS+KR RRK+
Subjt:  MPRNGWDPLLGTITLEDEQWNDLFKVNKRAKKFLKNGCPHYAKLMRIFGDTTATGVNACPSTKLPSDSED--ENDVGSNTNFVGEENDNEKSRKRVRRKR

Query:  DEFCSFLSSFIHVYAENAKRKNDILEKRSFSSIVSQVDEGQLSRKKDEVDEELMKCFKFLNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFI
        D+F SF SSF+ VYAENAKRKNDILEKRSF    SQVDE Q S KKD++ EELM+C   LNTMED+DGEAY+K+LKLLHGDLAWRKLFL MPDSRK+DFI
Subjt:  DEFCSFLSSFIHVYAENAKRKNDILEKRSFSSIVSQVDEGQLSRKKDEVDEELMKCFKFLNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFI

Query:  NSI
        NS+
Subjt:  NSI

A0A5A7VKM6 L10-interacting MYB domain-containing protein-like

2.2e-79

74.88

Show/hide

Query:  MPRNGWDPLLGTITLEDEQWNDLFKVNKRAKKFLKNGCPHYAKLMRIFGDTTATGVNACPSTKLPSDSED--ENDVGSNTNFVGEENDNEKSRKRVRRKR
        M  NGWDPLLGTI LE+EQWN+LFKVNKR KKF K+GCPHY KL+RIFGDTTATGVNACPST+L S SED  ENDV SNTN   EEN+  KS+KR RRK+
Subjt:  MPRNGWDPLLGTITLEDEQWNDLFKVNKRAKKFLKNGCPHYAKLMRIFGDTTATGVNACPSTKLPSDSED--ENDVGSNTNFVGEENDNEKSRKRVRRKR

Query:  DEFCSFLSSFIHVYAENAKRKNDILEKRSFSSIVSQVDEGQLSRKKDEVDEELMKCFKFLNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFI
        DEF SF SSF+ VYAENAKRKN+ILEKRSF    SQVDE Q S KKD++ EELM+C   LNTMED+DGEAY+K+LKLLH DLAWRKLFL MPDSRK+DFI
Subjt:  DEFCSFLSSFIHVYAENAKRKNDILEKRSFSSIVSQVDEGQLSRKKDEVDEELMKCFKFLNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFI

Query:  NSI
        NS+
Subjt:  NSI

A0A5D3BNQ5 L10-interacting MYB domain-containing protein-like

2.1e-82

76.85

Show/hide

Query:  MPRNGWDPLLGTITLEDEQWNDLFKVNKRAKKFLKNGCPHYAKLMRIFGDTTATGVNACPSTKLPSDSED--ENDVGSNTNFVGEENDNEKSRKRVRRKR
        M  NGWDPLLGTI LE+EQWN+LFKVNKRAKKF K+GCPHY KL+RIFGDTTATGVNACPST+L SDSED  ENDV SNTN   EEN+  KS+KR RRK+
Subjt:  MPRNGWDPLLGTITLEDEQWNDLFKVNKRAKKFLKNGCPHYAKLMRIFGDTTATGVNACPSTKLPSDSED--ENDVGSNTNFVGEENDNEKSRKRVRRKR

Query:  DEFCSFLSSFIHVYAENAKRKNDILEKRSFSSIVSQVDEGQLSRKKDEVDEELMKCFKFLNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFI
        DEF SF SSF+ VYAENAKRKNDILEKRSF    SQVDE Q S KKD++ EELM+C   LNTMED+DGEAY+K+LKLLHGDLAWRKLFL MPDSRK+DFI
Subjt:  DEFCSFLSSFIHVYAENAKRKNDILEKRSFSSIVSQVDEGQLSRKKDEVDEELMKCFKFLNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFI

Query:  NSI
        NS+
Subjt:  NSI

A0A5D3C535 L10-interacting MYB domain-containing protein-like

2.4e-81

76.35

Show/hide

Query:  MPRNGWDPLLGTITLEDEQWNDLFKVNKRAKKFLKNGCPHYAKLMRIFGDTTATGVNACPSTKLPSDSED--ENDVGSNTNFVGEENDNEKSRKRVRRKR
        M  N WDPLLGTI LE+EQWN+LFKVNKRAKKF K+GCPHY KL+RIFGDTTATGVNACPST+L SDSED  ENDV SNTN   EEN+  KS+KR RRK+
Subjt:  MPRNGWDPLLGTITLEDEQWNDLFKVNKRAKKFLKNGCPHYAKLMRIFGDTTATGVNACPSTKLPSDSED--ENDVGSNTNFVGEENDNEKSRKRVRRKR

Query:  DEFCSFLSSFIHVYAENAKRKNDILEKRSFSSIVSQVDEGQLSRKKDEVDEELMKCFKFLNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFI
        DEF SF SSF+ VYAENAKRKNDILEKRSF    SQVDE Q S KKD++ EELM+C   LNTMED+DGEAY+K+LKLLHGDLAWRKLFL MPDSRK+DFI
Subjt:  DEFCSFLSSFIHVYAENAKRKNDILEKRSFSSIVSQVDEGQLSRKKDEVDEELMKCFKFLNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFI

Query:  NSI
        NS+
Subjt:  NSI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGCCAAGAAATGGTTGGGATCCATTATTGGGCACCATCACTCTAGAAGATGAGCAATGGAATGATCTTTTTAAGGTGAATAAGAGAGCTAAAAAGTTTTTAAAAAATGG
TTGCCCACATTATGCAAAGCTTATGAGGATTTTTGGAGATACTACTGCTACAGGGGTAAATGCTTGCCCATCAACAAAACTTCCTTCAGATTCTGAAGATGAAAATGATG
TTGGAAGCAATACTAACTTTGTTGGTGAAGAAAATGATAATGAAAAAAGTAGAAAACGAGTTCGAAGGAAGAGGGACGAATTTTGTAGTTTCCTTTCTTCATTTATACAT
GTGTATGCTGAGAACGCAAAGAGAAAAAATGACATCCTTGAGAAAAGATCTTTTAGTTCTATCGTTAGTCAAGTTGATGAGGGTCAATTATCAAGAAAAAAAGATGAAGT
TGATGAAGAGCTGATGAAATGTTTCAAATTTTTAAATACAATGGAGGATATTGATGGAGAGGCTTATACTAAAGTATTGAAACTTTTGCACGGAGATCTTGCTTGGAGAA
AATTATTTTTGCTCATGCCTGATTCAAGGAAGAAAGATTTCATAAACAGTATCTAG

mRNA sequence

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Protein sequence

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MPRNGWDPLLGTITLEDEQWNDLFKVNKRAKKFLKNGCPHYAKLMRIFGDTTATGVNACPSTKLPSDSEDENDVGSNTNFVGEENDNEKSRKRVRRKRDEFCSFLSSFIH
VYAENAKRKNDILEKRSFSSIVSQVDEGQLSRKKDEVDEELMKCFKFLNTMEDIDGEAYTKVLKLLHGDLAWRKLFLLMPDSRKKDFINSI

Lsi11G008520 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome