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Lsi11G008640 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G008640
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUbiquitin carboxyl-terminal hydrolase 15
Genome locationchr11:11122001..11123013
RNA-Seq ExpressionLsi11G008640
SyntenyLsi11G008640
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049869.1 Ubiquitin carboxyl-terminal hydrolase 15 [Cucumis melo var. makuwa]1.9e-4787.5Show/hide
Query:  MSSYAVLFSFIVLLFLAHDAIEASSIHVNGSDQEPMMVPLMETTT--VMMN-GGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSF
        MSSY VLFSFI LL LA +AIE +SI VN SDQEP+MVPLMETTT  +MMN GGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSF
Subjt:  MSSYAVLFSFIVLLFLAHDAIEASSIHVNGSDQEPMMVPLMETTT--VMMN-GGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSF

Query:  TPKTCNCFGCHI
        TPKTCNCFGCHI
Subjt:  TPKTCNCFGCHI

KAG6598934.1 hypothetical protein SDJN03_08712, partial [Cucurbita argyrosperma subsp. sororia]3.9e-4883.93Show/hide
Query:  MSSYAVLFSFIVLLFLAHDAIEASSIHVNGSDQEPMMVPL---METTTVMMNGGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSF
        MS Y VLFS I LLFLAH+AIEA+SIHVN SDQEPMMVPL   METT +++N GRRQL+SFQICALCTCCGGARGMC+PSPCCYAINCNIPNRPFGFCSF
Subjt:  MSSYAVLFSFIVLLFLAHDAIEASSIHVNGSDQEPMMVPL---METTTVMMNGGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSF

Query:  TPKTCNCFGCHI
        TP+TCNCFGCHI
Subjt:  TPKTCNCFGCHI

KAG7029889.1 hypothetical protein SDJN02_08232 [Cucurbita argyrosperma subsp. argyrosperma]3.9e-4883.93Show/hide
Query:  MSSYAVLFSFIVLLFLAHDAIEASSIHVNGSDQEPMMVPL---METTTVMMNGGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSF
        MS Y VLFS I LLFLAH+AIEA+SIHVN SDQEPMMVPL   METT +++N GRRQL+SFQICALCTCCGGARGMC+PSPCCYAINCNIPNRPFGFCSF
Subjt:  MSSYAVLFSFIVLLFLAHDAIEASSIHVNGSDQEPMMVPL---METTTVMMNGGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSF

Query:  TPKTCNCFGCHI
        TP+TCNCFGCHI
Subjt:  TPKTCNCFGCHI

KGN61259.1 hypothetical protein Csa_005922 [Cucumis sativus]1.6e-4988.5Show/hide
Query:  MSSYAVLFSFIVLLFLAHDAIEASSIHVNGSDQEPMMVPLMETTT---VMMN-GGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCS
        MSSY VLFSFI+LLFLA +AIE +SIHVN SDQEP+MVPLMETTT   +MMN GGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCS
Subjt:  MSSYAVLFSFIVLLFLAHDAIEASSIHVNGSDQEPMMVPLMETTT---VMMN-GGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCS

Query:  FTPKTCNCFGCHI
        FTPKTCNCFGCHI
Subjt:  FTPKTCNCFGCHI

XP_023546744.1 uncharacterized protein LOC111805758 [Cucurbita pepo subsp. pepo]2.3e-4883.93Show/hide
Query:  MSSYAVLFSFIVLLFLAHDAIEASSIHVNGSDQEPMMVPL---METTTVMMNGGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSF
        MS Y VLFS I LLFLAH+AIEA+SIHVN SDQEPMMVPL   METT +++NGGRRQL+SFQICALCTCCGGARG+C+PSPCCYAINCNIPNRPFGFCSF
Subjt:  MSSYAVLFSFIVLLFLAHDAIEASSIHVNGSDQEPMMVPL---METTTVMMNGGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSF

Query:  TPKTCNCFGCHI
        TP+TCNCFGCHI
Subjt:  TPKTCNCFGCHI

TrEMBL top hitse value%identityAlignment
A0A0A0LJJ1 Uncharacterized protein7.6e-5088.5Show/hide
Query:  MSSYAVLFSFIVLLFLAHDAIEASSIHVNGSDQEPMMVPLMETTT---VMMN-GGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCS
        MSSY VLFSFI+LLFLA +AIE +SIHVN SDQEP+MVPLMETTT   +MMN GGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCS
Subjt:  MSSYAVLFSFIVLLFLAHDAIEASSIHVNGSDQEPMMVPLMETTT---VMMN-GGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCS

Query:  FTPKTCNCFGCHI
        FTPKTCNCFGCHI
Subjt:  FTPKTCNCFGCHI

A0A5D3C6S7 Ubiquitin carboxyl-terminal hydrolase 159.3e-4887.5Show/hide
Query:  MSSYAVLFSFIVLLFLAHDAIEASSIHVNGSDQEPMMVPLMETTT--VMMN-GGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSF
        MSSY VLFSFI LL LA +AIE +SI VN SDQEP+MVPLMETTT  +MMN GGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSF
Subjt:  MSSYAVLFSFIVLLFLAHDAIEASSIHVNGSDQEPMMVPLMETTT--VMMN-GGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSF

Query:  TPKTCNCFGCHI
        TPKTCNCFGCHI
Subjt:  TPKTCNCFGCHI

A0A6J1D9H7 uncharacterized protein LOC111018147 isoform X12.1e-4478.07Show/hide
Query:  MSSYAVLFSFIVLLFLAHDAIEASSIHVNGSDQEPMMVPLM-----ETTTVMMNGGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC
        M S+ V FS I +LFLA +AIEA+SI+VN SDQEPMMVPLM       T V+M+GGRR+L+SFQ+CALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC
Subjt:  MSSYAVLFSFIVLLFLAHDAIEASSIHVNGSDQEPMMVPLM-----ETTTVMMNGGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC

Query:  SFTPKTCNCFGCHI
        SFTPKTCNCFGCHI
Subjt:  SFTPKTCNCFGCHI

A0A6J1FHK2 uncharacterized protein LOC1114440311.1e-4378.95Show/hide
Query:  MSSYAVLFSFIVLLFLAHDAIEASSIHVN-GSDQEPMMVPLMET----TTVMMNGGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC
        M  Y V+F  I +LFLAHDAIEA+S H N   DQEPMMVPLME     T V MNG RRQL+SFQ+CALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC
Subjt:  MSSYAVLFSFIVLLFLAHDAIEASSIHVN-GSDQEPMMVPLMET----TTVMMNGGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC

Query:  SFTPKTCNCFGCHI
        SFTPKTCNCFGCHI
Subjt:  SFTPKTCNCFGCHI

A0A6J1HP40 uncharacterized protein LOC1114653834.3e-4580.7Show/hide
Query:  MSSYAVLFSFIVLLFLAHDAIEASSIHVN-GSDQEPMMVPLMET----TTVMMNGGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC
        MS Y V+F  I +LFLAHDAIEA+S H N  SDQEPMMVPLME     T V MNG RRQL+SFQ+CALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC
Subjt:  MSSYAVLFSFIVLLFLAHDAIEASSIHVN-GSDQEPMMVPLMET----TTVMMNGGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFC

Query:  SFTPKTCNCFGCHI
        SFTPKTCNCFGCHI
Subjt:  SFTPKTCNCFGCHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G65295.1 unknown protein1.5e-3462.26Show/hide
Query:  YAVLFSFIVLLFLAHDAIEASSIHVNGSDQEPMMVPLMETTTVMMNGGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSFTPKTCN
        + +L  F + +  +H A E         D E MMVPL E   ++MN  RR+L SFQIC++CTCCGGA+G+CLPSPCCYAINCNIPNRPFG+CSFTPKTCN
Subjt:  YAVLFSFIVLLFLAHDAIEASSIHVNGSDQEPMMVPLMETTTVMMNGGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSFTPKTCN

Query:  CFGCHI
        CFGCHI
Subjt:  CFGCHI

AT5G01015.1 unknown protein1.4e-1143.1Show/hide
Query:  RRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSFTPKTCNCFGCHI
        R+ +   ++C  C CC      C   PCC+ INC +PN+PFG C+F PK+C+C  C I
Subjt:  RRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSFTPKTCNCFGCHI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTTATGCGGTTTTATTTTCTTTCATTGTCTTGCTCTTTCTCGCTCACGACGCCATTGAAGCGAGCTCAATCCACGTTAATGGGTCCGATCAAGAACCGATGAT
GGTACCATTGATGGAAACGACGACGGTGATGATGAACGGCGGCCGGAGACAGCTGAAAAGCTTCCAGATATGTGCTCTCTGTACCTGCTGCGGTGGCGCCAGAGGAATGT
GCCTTCCATCGCCTTGTTGCTATGCTATAAACTGTAACATTCCTAATAGGCCTTTTGGCTTTTGCTCTTTTACCCCAAAGACCTGTAACTGCTTTGGCTGCCATATTTAA
mRNA sequenceShow/hide mRNA sequence
TAAAAAAGGACCAAACAAAGAGAAATTTGGCCACAGCGTATAATCACCCTTCACGAGGCCCATTCTTTCTTCTTCAGAAATTTTCTTCAACCAACTTCTTCTTCTTCTTC
TTCTTCTTCTTCTTCAAACTCCCTCCAAAAATTCTCTGCAAAACCCTCATTCAAATTCAATCCTCAGATCCAACCAATTCAAACTTCTTCATCTTCAACAAACAAATTAG
AAGCTCTCCATGAACAAATTCTTCACTCACTTGTAACTCCCTCTTCTCAAAACCCCCTTTTTCCCCTCACCATGTCTTCTTATGCGGTTTTATTTTCTTTCATTGTCTTG
CTCTTTCTCGCTCACGACGCCATTGAAGCGAGCTCAATCCACGTTAATGGGTCCGATCAAGAACCGATGATGGTACCATTGATGGAAACGACGACGGTGATGATGAACGG
CGGCCGGAGACAGCTGAAAAGCTTCCAGATATGTGCTCTCTGTACCTGCTGCGGTGGCGCCAGAGGAATGTGCCTTCCATCGCCTTGTTGCTATGCTATAAACTGTAACA
TTCCTAATAGGCCTTTTGGCTTTTGCTCTTTTACCCCAAAGACCTGTAACTGCTTTGGCTGCCATATTTAAGCTTTTTCTTGTTATTCTTCACCATAATTCTCTCTATGT
TTATGTCATTGAAAATTGTTTATTGTTGGAACTCTGAAACTGTGGAATATATGGTCTGAATTGTTCATTGTTCATGGGCTTGGCTTGATTGTAGCATAGTGCCATTGTTG
AACTTTATAGAAGAGAATCTTCCAAGATTTGGCTTGTTGAGCACTGTTGATAGCTCCATTATGTTTAATCTAAATGCCCTTTTCTTGTTTTT
Protein sequenceShow/hide protein sequence
MSSYAVLFSFIVLLFLAHDAIEASSIHVNGSDQEPMMVPLMETTTVMMNGGRRQLKSFQICALCTCCGGARGMCLPSPCCYAINCNIPNRPFGFCSFTPKTCNCFGCHI