; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G008690 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G008690
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTMV resistance protein N
Genome locationchr11:11222589..11229968
RNA-Seq ExpressionLsi11G008690
SyntenyLsi11G008690
Gene Ontology termsNA
InterPro domainsIPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049884.1 TMV resistance protein N-like [Cucumis melo var. makuwa]1.6e-3748.78Show/hide
Query:  HELHTLI-----KIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCNARG--------------------------------------
        H L T I     KIDRLHDDLGHLESLTTLLADRTA SHIPFSIVKLKKLTDLSLC CN+R                                       
Subjt:  HELHTLI-----KIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCNARG--------------------------------------

Query:  ------------QFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSELS-----------------EGLCATNCKSLVRTSDVPMFEKPLNMILTNC
                      PI++GSLSE+K LNLG   NL VLG +ICGL KL EL+                    CATNCKSLVRT D+  FE+  NM+LTNC
Subjt:  ------------QFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSELS-----------------EGLCATNCKSLVRTSDVPMFEKPLNMILTNC

Query:  CALLE
        CALLE
Subjt:  CALLE

XP_016899476.1 PREDICTED: TMV resistance protein N [Cucumis melo]1.6e-3748.78Show/hide
Query:  HELHTLI-----KIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCNARG--------------------------------------
        H L T I     KIDRLHDDLGHLESLTTLLADRTA SHIPFSIVKLKKLTDLSLC CN+R                                       
Subjt:  HELHTLI-----KIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCNARG--------------------------------------

Query:  ------------QFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSELS-----------------EGLCATNCKSLVRTSDVPMFEKPLNMILTNC
                      PI++GSLSE+K LNLG   NL VLG +ICGL KL EL+                    CATNCKSLVRT D+  FE+  NM+LTNC
Subjt:  ------------QFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSELS-----------------EGLCATNCKSLVRTSDVPMFEKPLNMILTNC

Query:  CALLE
        CALLE
Subjt:  CALLE

XP_031737434.1 TMV resistance protein N isoform X1 [Cucumis sativus]9.2e-3849.27Show/hide
Query:  HELHTLI-----KIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCNARG--------------------------------------
        H L T I     KID LHDDLGHLESLTTLLADRTA SHIPFSIVKLKKLTDLSLC CN R                                       
Subjt:  HELHTLI-----KIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCNARG--------------------------------------

Query:  ------------QFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSELS-----------------EGLCATNCKSLVRTSDVPMFEKPLNMILTNC
                      PI++GSLSE+K LNLG   NL+VLG ++CGLLKL+EL+                    CAT+CKSLVRT DV MFE+  NMILTNC
Subjt:  ------------QFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSELS-----------------EGLCATNCKSLVRTSDVPMFEKPLNMILTNC

Query:  CALLE
        CALLE
Subjt:  CALLE

XP_031737435.1 TMV resistance protein N isoform X2 [Cucumis sativus]1.2e-2448.08Show/hide
Query:  HELHTLI-----KIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCNARG--------------------------------------
        H L T I     KID LHDDLGHLESLTTLLADRTA SHIPFSIVKLKKLTDLSLC CN R                                       
Subjt:  HELHTLI-----KIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCNARG--------------------------------------

Query:  ------------QFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSELSEGLC
                      PI++GSLSE+K LNLG   NL+VLG ++CGLLKL+EL+   C
Subjt:  ------------QFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSELSEGLC

XP_038890171.1 disease resistance protein RPV1-like [Benincasa hispida]9.2e-3850.98Show/hide
Query:  HELHTLI-----KIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCNARG--------------------------------------
        H L TL      KIDRLHDDLG LESLTTLLADRTA SH+PFSIVKLK LTDLSLC CN+ G                                      
Subjt:  HELHTLI-----KIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCNARG--------------------------------------

Query:  -----------QFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSELSEGLC-----------------ATNCKSLVRTSDVPMFEKPLNMILTNCC
                     PI+LGSLSE+K LNLG   NL+VLGN+ICGLLKLSELS   C                 ATNCKSLVRT DV MFE    MILTNCC
Subjt:  -----------QFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSELSEGLC-----------------ATNCKSLVRTSDVPMFEKPLNMILTNCC

Query:  ALLE
        ALLE
Subjt:  ALLE

TrEMBL top hitse value%identityAlignment
A0A0A0LJJ7 TIR domain-containing protein4.4e-3849.27Show/hide
Query:  HELHTLI-----KIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCNARG--------------------------------------
        H L T I     KID LHDDLGHLESLTTLLADRTA SHIPFSIVKLKKLTDLSLC CN R                                       
Subjt:  HELHTLI-----KIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCNARG--------------------------------------

Query:  ------------QFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSELS-----------------EGLCATNCKSLVRTSDVPMFEKPLNMILTNC
                      PI++GSLSE+K LNLG   NL+VLG ++CGLLKL+EL+                    CAT+CKSLVRT DV MFE+  NMILTNC
Subjt:  ------------QFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSELS-----------------EGLCATNCKSLVRTSDVPMFEKPLNMILTNC

Query:  CALLE
        CALLE
Subjt:  CALLE

A0A1S4DU12 TMV resistance protein N7.6e-3848.78Show/hide
Query:  HELHTLI-----KIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCNARG--------------------------------------
        H L T I     KIDRLHDDLGHLESLTTLLADRTA SHIPFSIVKLKKLTDLSLC CN+R                                       
Subjt:  HELHTLI-----KIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCNARG--------------------------------------

Query:  ------------QFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSELS-----------------EGLCATNCKSLVRTSDVPMFEKPLNMILTNC
                      PI++GSLSE+K LNLG   NL VLG +ICGL KL EL+                    CATNCKSLVRT D+  FE+  NM+LTNC
Subjt:  ------------QFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSELS-----------------EGLCATNCKSLVRTSDVPMFEKPLNMILTNC

Query:  CALLE
        CALLE
Subjt:  CALLE

A0A5D3C8K6 TMV resistance protein N-like7.6e-3848.78Show/hide
Query:  HELHTLI-----KIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCNARG--------------------------------------
        H L T I     KIDRLHDDLGHLESLTTLLADRTA SHIPFSIVKLKKLTDLSLC CN+R                                       
Subjt:  HELHTLI-----KIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCNARG--------------------------------------

Query:  ------------QFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSELS-----------------EGLCATNCKSLVRTSDVPMFEKPLNMILTNC
                      PI++GSLSE+K LNLG   NL VLG +ICGL KL EL+                    CATNCKSLVRT D+  FE+  NM+LTNC
Subjt:  ------------QFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSELS-----------------EGLCATNCKSLVRTSDVPMFEKPLNMILTNC

Query:  CALLE
        CALLE
Subjt:  CALLE

A0A6P5TGG1 disease resistance protein TAO1-like2.5e-0938.19Show/hide
Query:  PKAKEIPKLHKAPKPGAAEAHELHTLI------KIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCN-ARGQFPIELGSLSEMKNLN
        P   + P L K    G     ++H+ +       +D L D LG + SLT L AD T   HIP SIVKLKKL  LSL  C+ +    P +LGSL  +++L 
Subjt:  PKAKEIPKLHKAPKPGAAEAHELHTLI------KIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCN-ARGQFPIELGSLSEMKNLN

Query:  LGATNNLKVLGNDICGLLKLSELS--EGLCATNCKSLVRTSDVP
        LG        GND C L  L+ LS  + LC   C+ L    D+P
Subjt:  LGATNNLKVLGNDICGLLKLSELS--EGLCATNCKSLVRTSDVP

M5Y7T1 TIR domain-containing protein1.3e-0835.19Show/hide
Query:  KPGAAEAHELHTLIKIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCN---ARGQFPIELGSLSEMKNLNLG---------------
        K  + E   L+     ++L + LG + SLTTL AD TA   IP SI+KLKKL  LSLCD     +    P  L SLS ++ L L                
Subjt:  KPGAAEAHELHTLIKIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCN---ARGQFPIELGSLSEMKNLNLG---------------

Query:  --ATNNLKVLGNDICGLLKLSELS--EGLCATNCKSLVRTSDVPMFEKPLNMILTNCCALLE
          +  NL + GND C L  LS LS  + L    CK+L   +D+P     L ++    C  LE
Subjt:  --ATNNLKVLGNDICGLLKLSELS--EGLCATNCKSLVRTSDVPMFEKPLNMILTNCCALLE

SwissProt top hitse value%identityAlignment
Q9LHP4 LRR receptor-like serine/threonine-protein kinase RGI16.9e-0427.97Show/hide
Query:  RLHDDLGHLESLTTL-LADRTATSHIPFSIVKLKKLTDLSLCDCNARGQFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSEL---SEGLCATNCK
        ++  ++G   +LT L LA+ + + ++P S+ KLKKL  LS+      G+ P +LG+ SE+ +L L   +    +  +I  L KL +L      L     +
Subjt:  RLHDDLGHLESLTTL-LADRTATSHIPFSIVKLKKLTDLSLCDCNARGQFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSEL---SEGLCATNCK

Query:  SLVRTSDVPMFEKPLNMI
         +   S++ M +  LN++
Subjt:  SLVRTSDVPMFEKPLNMI

Q9ZUK7 Receptor-like protein 181.4e-0435.71Show/hide
Query:  LGHLESLTTL-LADRTATSHIPFSIVKLKKLTDLSLCDCNARGQFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSELSEGLCATNCKSLVRTS
        LG+  SLTTL L++   +  IP S+  L  LT L L D N  G  P  LG+LS +  L LGA N +  +   +  L  L++L+  LC  +    + +S
Subjt:  LGHLESLTTL-LADRTATSHIPFSIVKLKKLTDLSLCDCNARGQFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSELSEGLCATNCKSLVRTS

Arabidopsis top hitse value%identityAlignment
AT1G27170.1 transmembrane receptors;ATP binding4.9e-0532.79Show/hide
Query:  LHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCNARGQFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSELSEGLCATNCKSLVRT
        L +++G + SL  LL D TA  ++P SI +L+ L  LSL  C  + + P+ +G+L  ++ L L  T  LK L + I  L  L +L        C SL + 
Subjt:  LHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCNARGQFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSELSEGLCATNCKSLVRT

Query:  SDVPMFEKPLNMILTNCCALLE
         D     K L  +  N  A+ E
Subjt:  SDVPMFEKPLNMILTNCCALLE

AT1G27180.1 disease resistance protein (TIR-NBS-LRR class), putative4.4e-0636.9Show/hide
Query:  LHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCNARGQFPIELGSLSEMKNLNLG--ATNNLKVLGNDICGLLKL
        L +++G +  L  LL D TA S++P+SI +L+KL  LSL  C +  + P  +G L+ +++L L   A  NL     D+  L KL
Subjt:  LHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCNARGQFPIELGSLSEMKNLNLG--ATNNLKVLGNDICGLLKL

AT1G69550.1 disease resistance protein (TIR-NBS-LRR class)9.8e-0629.84Show/hide
Query:  LHDDLGHLESLTTL-LADRTATSHIPFSIVKLKKLTDLSLCDCNARGQFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSELSEGLCATNCKSLVR
        L   +G+L +L  L L++ ++   +P SI  L  L  L L  C++  + P+ +G+L  +K LNL   ++L  L + I  L+ L E    L  + C SLV 
Subjt:  LHDDLGHLESLTTL-LADRTATSHIPFSIVKLKKLTDLSLCDCNARGQFPIELGSLSEMKNLNLGATNNLKVLGNDICGLLKLSELSEGLCATNCKSLVR

Query:  -TSDVPMFEKPLNMILTNCCALLE
          S +        + L+ C +L+E
Subjt:  -TSDVPMFEKPLNMILTNCCALLE

AT5G36930.1 Disease resistance protein (TIR-NBS-LRR class) family6.2e-0830.43Show/hide
Query:  KIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDC-----------------NARGQFPIELGSLSEMKNLNLGATN------------
        K++RL D LG LESLTTLLAD TA   IP +I +LKKL  LSL  C                 +     P+ L  L+ M+ L+LG  N            
Subjt:  KIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDC-----------------NARGQFPIELGSLSEMKNLNLGATN------------

Query:  -----NLKVLGNDICGL------------LKLSELSE------------GLCATNCKSLVRTSDVPMFEKPLNMILTNCCALLE
             +L + GN  C L            L LS+ S+             L    C  L RT D+        + L +C +L E
Subjt:  -----NLKVLGNDICGL------------LKLSELSE------------GLCATNCKSLVRTSDVPMFEKPLNMILTNCCALLE

AT5G36930.2 Disease resistance protein (TIR-NBS-LRR class) family6.2e-0830.43Show/hide
Query:  KIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDC-----------------NARGQFPIELGSLSEMKNLNLGATN------------
        K++RL D LG LESLTTLLAD TA   IP +I +LKKL  LSL  C                 +     P+ L  L+ M+ L+LG  N            
Subjt:  KIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDC-----------------NARGQFPIELGSLSEMKNLNLGATN------------

Query:  -----NLKVLGNDICGL------------LKLSELSE------------GLCATNCKSLVRTSDVPMFEKPLNMILTNCCALLE
             +L + GN  C L            L LS+ S+             L    C  L RT D+        + L +C +L E
Subjt:  -----NLKVLGNDICGL------------LKLSELSE------------GLCATNCKSLVRTSDVPMFEKPLNMILTNCCALLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTAGACCTAAGCCATTCCCAAAAGCTAAAGAAATCCCCAAACTTCACAAAGCTCCCAAACCTGGAGCAGCTGAAGCTCACGAACTGCATACCCTTATCAAGAT
CGACCGCCTCCACGACGACCTCGGCCATCTTGAGTCCCTTACCACCCTTCTCGCCGATCGAACCGCCACATCTCACATCCCTTTCTCCATTGTCAAGTTGAAGAAGCTCA
CTGACTTGTCTCTATGTGATTGTAACGCCAGAGGTCAATTTCCAATTGAGCTTGGGAGCTTAAGTGAGATGAAGAATTTGAATCTTGGGGCAACAAATAATTTGAAGGTT
TTGGGGAATGATATTTGTGGGCTGTTGAAACTGAGTGAGCTGAGTGAAGGTTTATGTGCCACAAATTGCAAGTCTTTGGTGAGGACTAGTGATGTTCCCATGTTTGAAAA
GCCACTCAATATGATTCTCACCAACTGTTGTGCATTGCTTGAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCTAGACCTAAGCCATTCCCAAAAGCTAAAGAAATCCCCAAACTTCACAAAGCTCCCAAACCTGGAGCAGCTGAAGCTCACGAACTGCATACCCTTATCAAGAT
CGACCGCCTCCACGACGACCTCGGCCATCTTGAGTCCCTTACCACCCTTCTCGCCGATCGAACCGCCACATCTCACATCCCTTTCTCCATTGTCAAGTTGAAGAAGCTCA
CTGACTTGTCTCTATGTGATTGTAACGCCAGAGGTCAATTTCCAATTGAGCTTGGGAGCTTAAGTGAGATGAAGAATTTGAATCTTGGGGCAACAAATAATTTGAAGGTT
TTGGGGAATGATATTTGTGGGCTGTTGAAACTGAGTGAGCTGAGTGAAGGTTTATGTGCCACAAATTGCAAGTCTTTGGTGAGGACTAGTGATGTTCCCATGTTTGAAAA
GCCACTCAATATGATTCTCACCAACTGTTGTGCATTGCTTGAG
Protein sequenceShow/hide protein sequence
MGSRPKPFPKAKEIPKLHKAPKPGAAEAHELHTLIKIDRLHDDLGHLESLTTLLADRTATSHIPFSIVKLKKLTDLSLCDCNARGQFPIELGSLSEMKNLNLGATNNLKV
LGNDICGLLKLSELSEGLCATNCKSLVRTSDVPMFEKPLNMILTNCCALLE