; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G008790 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G008790
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr11:11468351..11472981
RNA-Seq ExpressionLsi11G008790
SyntenyLsi11G008790
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK18693.1 hypothetical protein E5676_scaffold481G00410 [Cucumis melo var. makuwa]4.1e-1441.32Show/hide
Query:  MSNAPSNPNTVDLYISQPNITNQTSTREIENNIEVENVEGGLEQPFDDEEENLDQAIATNLEEVEIDDDESDLEQPSDGLYGVHDVPKTFNEIDLSDINI
        MSNAP  P+ V+LYISQPN+++     E  N  +  N         +++ +  D  IATN+E  E+DDD+SD++QP   L+GVHDVP+ FN IDL+++N 
Subjt:  MSNAPSNPNTVDLYISQPNITNQTSTREIENNIEVENVEGGLEQPFDDEEENLDQAIATNLEEVEIDDDESDLEQPSDGLYGVHDVPKTFNEIDLSDINI

Query:  ELDSVIERQNIGSDSLSKGMV
          D+ ++ +N+GS+ L   M+
Subjt:  ELDSVIERQNIGSDSLSKGMV
XP_038877923.1 uncharacterized protein LOC120070133 [Benincasa hispida]2.5e-1956.1Show/hide
Query:  MMSNAPSNPNTVDLYISQPNITNQTSTREIENNIEVENVEGGLEQPFDDEEENLDQAIATNLEEVEIDDDESDLEQPSDGLYGVHDVPKTFNEIDLSDIN
        MMSNAP  PN V+LYISQP++ + TSTRE     EVE VE  LE     E+E+ D  IATN EEV++DDD+ DL+Q S   YGVH+VP+TF EIDL+++ 
Subjt:  MMSNAPSNPNTVDLYISQPNITNQTSTREIENNIEVENVEGGLEQPFDDEEENLDQAIATNLEEVEIDDDESDLEQPSDGLYGVHDVPKTFNEIDLSDIN

Query:  IELDSVI-ERQNIGSDSLSKGMV
         E DS   E  N+GSDSL KGM+
Subjt:  IELDSVI-ERQNIGSDSLSKGMV
TrEMBL top hitse value%identityAlignment
A0A5D3D569 Uncharacterized protein2.0e-1441.32Show/hide
Query:  MSNAPSNPNTVDLYISQPNITNQTSTREIENNIEVENVEGGLEQPFDDEEENLDQAIATNLEEVEIDDDESDLEQPSDGLYGVHDVPKTFNEIDLSDINI
        MSNAP  P+ V+LYISQPN+++     E  N  +  N         +++ +  D  IATN+E  E+DDD+SD++QP   L+GVHDVP+ FN IDL+++N 
Subjt:  MSNAPSNPNTVDLYISQPNITNQTSTREIENNIEVENVEGGLEQPFDDEEENLDQAIATNLEEVEIDDDESDLEQPSDGLYGVHDVPKTFNEIDLSDINI

Query:  ELDSVIERQNIGSDSLSKGMV
          D+ ++ +N+GS+ L   M+
Subjt:  ELDSVIERQNIGSDSLSKGMV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGCAACGCTCCATCCAATCCAAATACGGTGGATCTCTATATTTCTCAACCAAACATCACAAATCAAACATCGACAAGAGAAATTGAAAATAATATAGAG
GTCGAAAATGTGGAAGGTGGTCTAGAGCAACCATTTGACGATGAAGAGGAAAATTTGGACCAAGCTATTGCCACAAATTTAGAAGAAGTTGAAATAGATGATGAT
GAAAGTGATCTAGAGCAGCCATCTGACGGATTGTATGGTGTTCATGATGTTCCTAAAACCTTTAATGAGATAGACCTGAGTGACATTAATATTGAACTTGATTCA
GTGATTGAGAGACAAAATATTGGATCTGATTCTTTGAGTAAAGGGATGGTGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGAGCAACGCTCCATCCAATCCAAATACGGTGGATCTCTATATTTCTCAACCAAACATCACAAATCAAACATCGACAAGAGAAATTGAAAATAATATAGAG
GTCGAAAATGTGGAAGGTGGTCTAGAGCAACCATTTGACGATGAAGAGGAAAATTTGGACCAAGCTATTGCCACAAATTTAGAAGAAGTTGAAATAGATGATGAT
GAAAGTGATCTAGAGCAGCCATCTGACGGATTGTATGGTGTTCATGATGTTCCTAAAACCTTTAATGAGATAGACCTGAGTGACATTAATATTGAACTTGATTCA
GTGATTGAGAGACAAAATATTGGATCTGATTCTTTGAGTAAAGGGATGGTGGAATGACGACTTTTCTGTTATCAGATCGCCTATGCATGTGTTAGTTCAATATAG
ATACATATTAGATACATTTGCCCCTAACCAAATTATTTGGGAGCTATATAACCATTTAATTCATAGATTGCCACCATACTGTCTCCAAGGTCATGAGATATGGAC
ATCCAGGTGTCCACTCATATGTTTTTTTGTGGTAGAGTGGTATTACCCAGATCGTGTGATGCGCTAGTTTGGGAGGTTGCAACGAATTCCAGAACCTTGCGATAC
GGACAAACGACTACATTTGCACGATCTACGAGGCAGACATGAGCGAGATTGGATTTCATATTTGGCTCCTCAAATATCAATTTGGGAGAATCGACATAATTGGAT
TGTTAGTGGACCTCCCATTAACAATGGTATAGATATTGAGCCTGGATACATTGATTGATATTCTAATATTAGCAGGCGATACATAACGAAAACAGGAGCAGCGTA
TCACTTTTTGAACGGCTGCAATGGCTAGAATAGCTAAAACTGCCTTGCGTATAATCACATCGATATATAGAGTACGATATTTCGAAGGCGATGTCCCTGATGAAG
AACAGGGTGATCCCGCTAGACATCAGGATGTTCCAATTCAACCTAATGTTCAAGATGAGTATCCGACAACTCCAGGCGATCATTTTACACCTGGTTCCATGATGC
CAACACCATCAACATTTGAACTTTTTCCAACAACTCTCAATATGCTAAATATGGAAGAAGGCCAAACTTCGCAAGCTCCTCGTCAAGATGTTTATGATCAATATA
TGACATACCGACATCATAATGAGGATATACAATTTACAGACGAATGCCAACCATCAAATGTAAGAGGTCATGGAGATCGTGGACATTATATAACTCAACAAGGTC
GATTTAGGCGTAACATGGGATCTTCTGCTGGACAAGAATAAACACATCGTAGTTGTATTCTAATATTGTTAAAGTTTGAACTGTATTTTTTATTTAATAATTGAT
TAGCCTTTTTAGCCATTAAGTCATATGAAAAATTAAGTAATCAAACCTTTGAATTTAGCAAACGTATTACACCTAATTCCAAACTCGAGTTACAACAATTGACAT
GTGTGGTCAAAAAGAATAAAATACATTAAAAG
Protein sequenceShow/hide protein sequence
MMSNAPSNPNTVDLYISQPNITNQTSTREIENNIEVENVEGGLEQPFDDEEENLDQAIATNLEEVEIDDDESDLEQPSDGLYGVHDVPKTFNEIDLSDINIELDS
VIERQNIGSDSLSKGMVE