; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi11G008960 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi11G008960
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionNADH-ubiquinone oxidoreductase chain 4
Genome locationchr11:11916946..11917402
RNA-Seq ExpressionLsi11G008960
SyntenyLsi11G008960
Gene Ontology termsGO:0015990 - electron transport coupled proton transport (biological process)
GO:0042773 - ATP synthesis coupled electron transport (biological process)
GO:0009536 - plastid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031966 - mitochondrial membrane (cellular component)
GO:0070469 - respirasome (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0048039 - ubiquinone binding (molecular function)
InterPro domainsIPR003918 - NADH:ubiquinone oxidoreductase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AEN56120.1 NADH dehydrogenase subunit 4 [Cucumis melo subsp. melo]6.0e-4087.5Show/hide
Query:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI
        +++  YGGSVSTM NLSTISFSFTLANMSLPGTS+FI EF ISVGAFQRNSLVATL ALGMILGAAY LWLYNRVVSGN KPDFLHKFSDPNGREVSIFI
Subjt:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI

Query:  HFLV
         FLV
Subjt:  HFLV

AZP40305.1 NADH dehydrogenase subunit 4 [Cucumis melo var. momordica]6.0e-4087.5Show/hide
Query:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI
        +++  YGGSVSTM NLSTISFSFTLANMSLPGTS+FI EF ISVGAFQRNSLVATL ALGMILGAAY LWLYNRVVSGN KPDFLHKFSDPNGREVSIFI
Subjt:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI

Query:  HFLV
         FLV
Subjt:  HFLV

KAG6585907.1 NADH-ubiquinone oxidoreductase chain 4, partial [Cucurbita argyrosperma subsp. sororia]3.0e-3986.54Show/hide
Query:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI
        +++  YGG VSTM NLSTISFSFTLANMSLPGTS+FI EF ISVGAFQRNSLVATL ALGMILGAAY LWLYNRVVSGNFK DFLHKFSDPNGREVSIFI
Subjt:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI

Query:  HFLV
         FLV
Subjt:  HFLV

YP_004849354.1 NADH dehydrogenase subunit 4 [Cucumis sativus]6.0e-4087.5Show/hide
Query:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI
        +++  YGGSVSTM NLSTISFSFTLANMSLPGTS+FI EF ISVGAFQRNSLVATL ALGMILGAAY LWLYNRVVSGN KPDFLHKFSDPNGREVSIFI
Subjt:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI

Query:  HFLV
         FLV
Subjt:  HFLV

YP_009913636.1 NADH dehydrogenase subunit 4 [Luffa acutangula]3.5e-4087.5Show/hide
Query:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI
        +++  YGGSVSTM NLSTISFSFTLANMSLPGTS+FI EF ISVGAFQRNSLVATL ALGMILGAAY LWLYNRVVSGN KPDFLHKFSDPNGREVSIFI
Subjt:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI

Query:  HFLV
         FLV
Subjt:  HFLV

TrEMBL top hitse value%identityAlignment
A0A072THH4 NADH-quinone oxidoreductase protein5.4e-3976.23Show/hide
Query:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI
        +++  YGG VSTM NLSTISFS TLANMS PGTS+FI EF ISVGAFQRNSLVATL ALGMILGAAY LWLYNRVVSGN K DFLHKFSDPNGREVSIFI
Subjt:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI

Query:  HFL-----VLAMDGCDFPQLVW
         FL     V A DG D   L W
Subjt:  HFL-----VLAMDGCDFPQLVW

A0A3S9JII3 NADH-ubiquinone oxidoreductase chain 42.9e-4087.5Show/hide
Query:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI
        +++  YGGSVSTM NLSTISFSFTLANMSLPGTS+FI EF ISVGAFQRNSLVATL ALGMILGAAY LWLYNRVVSGN KPDFLHKFSDPNGREVSIFI
Subjt:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI

Query:  HFLV
         FLV
Subjt:  HFLV

A0A7D5Y3R4 NADH-ubiquinone oxidoreductase chain 41.7e-4087.5Show/hide
Query:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI
        +++  YGGSVSTM NLSTISFSFTLANMSLPGTS+FI EF ISVGAFQRNSLVATL ALGMILGAAY LWLYNRVVSGN KPDFLHKFSDPNGREVSIFI
Subjt:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI

Query:  HFLV
         FLV
Subjt:  HFLV

G3EJ06 NADH-ubiquinone oxidoreductase chain 42.9e-4087.5Show/hide
Query:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI
        +++  YGGSVSTM NLSTISFSFTLANMSLPGTS+FI EF ISVGAFQRNSLVATL ALGMILGAAY LWLYNRVVSGN KPDFLHKFSDPNGREVSIFI
Subjt:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI

Query:  HFLV
         FLV
Subjt:  HFLV

G3EU35 NADH-ubiquinone oxidoreductase chain 42.9e-4087.5Show/hide
Query:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI
        +++  YGGSVSTM NLSTISFSFTLANMSLPGTS+FI EF ISVGAFQRNSLVATL ALGMILGAAY LWLYNRVVSGN KPDFLHKFSDPNGREVSIFI
Subjt:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI

Query:  HFLV
         FLV
Subjt:  HFLV

SwissProt top hitse value%identityAlignment
P26848 NADH-ubiquinone oxidoreductase chain 47.3e-3373.08Show/hide
Query:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI
        +++  YGG VSTM   STI   FTLANMSLPGTS+FI EF I VGAFQRNSLVATL ALGMILGAAY LWLYNRVV GNFKP+F+ KFSD N REV IF+
Subjt:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI

Query:  HFLV
         F+V
Subjt:  HFLV

P27572 NADH-ubiquinone oxidoreductase chain 41.4e-3678.85Show/hide
Query:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI
        +++  YGG VSTM N STI F FTLANMSLPGTS+FI EF I VGAFQRNSLVATL ALGMILGAAY LWLYNRVVSGN KPDFL+KFSD NGREV IF+
Subjt:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI

Query:  HFLV
         FLV
Subjt:  HFLV

P93313 NADH-ubiquinone oxidoreductase chain 41.5e-3881.73Show/hide
Query:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI
        +++  YGG VSTM N STI FSFTLANMSLPGTS+FI EF I VGAFQRNSLVATL ALGMILGAAY LWLYNRVVSGN KPDFLHKFSD NGREV IFI
Subjt:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI

Query:  HFLV
         FLV
Subjt:  HFLV

Q04050 NADH-ubiquinone oxidoreductase chain 42.4e-3982.69Show/hide
Query:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI
        +++  YGG VSTM NLSTI FSFTLANMS PGTS+FI EF I VGAFQRNSLVATL ALGMILGAAY LWLYNRVVSGN KPDFLHKFSD NGREVSIFI
Subjt:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI

Query:  HFLV
         FLV
Subjt:  HFLV

Q37617 NADH-ubiquinone oxidoreductase chain 46.7e-1847.47Show/hide
Query:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIF
        +++  Y G   TM   + +   FT+AN+SLPGTS+F  EF + +G++Q NS VA   A GM+LGAAY LWL NR++ G  KPDF++ +SD N RE  +F
Subjt:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIF

Arabidopsis top hitse value%identityAlignment
ATMG00580.1 NADH dehydrogenase subunit 42.2e-4082.69Show/hide
Query:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI
        +++  YGG VSTM NLSTI FSFTLANMS PGTS+FI EF I VGAFQRNSLVATL ALGMILGAAY LWLYNRVVSGN KPDFLHKFSD NGREVSIFI
Subjt:  QVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFI

Query:  HFLV
         FLV
Subjt:  HFLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATTTATTACATATAATTTTGAATCAAGTTATAATGTGTTACGGAGGTTCAGTGAGCACCATGTCGAATCTCTCTACCATTTCCTTCTCTTTCACTTTGGCCAATAT
GAGTTTACCTGGTACTAGCAACTTTATCGAAGAATTTTCCATCTCAGTAGGAGCTTTCCAAAGAAATAGCTTAGTAGCCACATTAGTCGCTCTTGGGATGATTTTAGGCG
CGGCGTATTTCCTTTGGCTATATAATCGTGTGGTTTCTGGAAATTTTAAACCTGATTTCCTCCATAAATTCTCCGATCCAAATGGCAGAGAAGTTTCCATATTTATACAT
TTTCTTGTGCTTGCGATGGACGGATGCGACTTCCCTCAGTTGGTTTGGGTGGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTATTTATTACATATAATTTTGAATCAAGTTATAATGTGTTACGGAGGTTCAGTGAGCACCATGTCGAATCTCTCTACCATTTCCTTCTCTTTCACTTTGGCCAATAT
GAGTTTACCTGGTACTAGCAACTTTATCGAAGAATTTTCCATCTCAGTAGGAGCTTTCCAAAGAAATAGCTTAGTAGCCACATTAGTCGCTCTTGGGATGATTTTAGGCG
CGGCGTATTTCCTTTGGCTATATAATCGTGTGGTTTCTGGAAATTTTAAACCTGATTTCCTCCATAAATTCTCCGATCCAAATGGCAGAGAAGTTTCCATATTTATACAT
TTTCTTGTGCTTGCGATGGACGGATGCGACTTCCCTCAGTTGGTTTGGGTGGCATAG
Protein sequenceShow/hide protein sequence
MYLLHIILNQVIMCYGGSVSTMSNLSTISFSFTLANMSLPGTSNFIEEFSISVGAFQRNSLVATLVALGMILGAAYFLWLYNRVVSGNFKPDFLHKFSDPNGREVSIFIH
FLVLAMDGCDFPQLVWVA